Re: [R] Installing Packages

Thank you all - that was helpful. I guess I assumes everything that got pushed up to the server was already compiled. -Original Message- From: Duncan Murdoch Sent: Wednesday, March 11, 2020 10:10 AM To: reichm...@sbcglobal.net; r-help@r-project.org Subject: Re: [R] Installing Packages

Re: [R] Installing Packages

On 11/03/2020 7:46 a.m., Jeff Reichman wrote: R-Help Recently I've started receiving the following message when updating packages - "Do you want to install from sources the packages which need compilation." I generally click "Yes," but what is this asking me. That is it appears to be

Re: [R] Installing Packages

Because pre-compiled (binary) versions of packages are getting built slower than the introduction of new versions of the packages are getting approved. On March 11, 2020 7:46:22 AM PDT, Jeff Reichman wrote: >R-Help > > > >Recently I've started receiving the following message when updating

Re: [R] Installing Packages

Hi, This means that the package you were trying to install does not have a compiled version stored on the server. Sometimes you would not see the question because the server has compiled the package for you, but sometimes it doesn't. Cheers, Jiefei On Wed, Mar 11, 2020 at 10:46 AM Jeff

[R] Installing Packages

R-Help Recently I've started receiving the following message when updating packages - "Do you want to install from sources the packages which need compilation." I generally click "Yes," but what is this asking me. That is it appears to be re-compiling certain packages? Why? RStudio

Re: [R] Installing packages in bulk

On Mon, 1 Oct 2018, Bert Gunter wrote: Your syntax is wrong. See the example at the end of ?install.packages. Bert, Thank you. Rich __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see

Re: [R] Installing packages in bulk

Your syntax is wrong. pkgs character ***vector*** of the names of packages See the example at the end of ?install.packages. "a","b", "c" is **not** a vector c("a", "b", "c") **is** a vector. -- Bert Bert Gunter "The trouble with having an open mind is that people keep coming along and

[R] Installing packages in bulk

For a new installation of R-3.5.1 I want to install all packages on another host. I prepared a file, R-libraries.R, which contains install.packages('BH, ...') for the entire list. When I source() this file on the new host and select a CRAN mirror I see the message, "Warning message: package

Re: [R] installing packages

To All, Thanks for your help. I uninstalled R, the 3.2 library and R Studio. Reinstalled R and R Studio. Now the temp files move the newly installed packages into the R-.23.2.4revised library. > .libPaths() [1] "C:/Users/james_henson/Desktop/Documents/R/win-library/3.2" [2] "C:/Program

Re: [R] installing packages

I hope not. That directory is not for working in. suggestion to restart R sounds most likely to fix the issue. -- Sent from my phone. Please excuse my brevity. On March 21, 2016 2:10:01 PM PDT, KMNanus wrote: >Have you set your working directory to the “3.2” folder? >Ken

Re: [R] installing packages

Have you set your working directory to the “3.2” folder? Ken kmna...@gmail.com 914-450-0816 (tel) 347-730-4813 (fax) > On Mar 21, 2016, at 5:07 PM, James Henson wrote: > > Dear R community, > > When I install or update a package, R prints the waring below. I go to the >

Re: [R] installing packages

Can you load the downloaded library? If so I'd not worry about it. John Kane Kingston ON Canada > -Original Message- > From: jfhens...@gmail.com > Sent: Mon, 21 Mar 2016 16:07:41 -0500 > To: r-help@r-project.org > Subject: [R] installing packages > > Dear R c

Re: [R] installing packages

On 21.03.2016 22:07, James Henson wrote: Dear R community, When I install or update a package, R prints the waring below. I go to the ‘downloaded_packages’ folder in the Temp file and manually move the new or updated package to the folder ‘3.2’. How can I instruct R to download new and

[R] installing packages

Dear R community, When I install or update a package, R prints the waring below. I go to the ‘downloaded_packages’ folder in the Temp file and manually move the new or updated package to the folder ‘3.2’. How can I instruct R to download new and updates packages into the ‘3.2’ folder? Warning

Re: [R] installing Packages

On 26/01/2015 16:51, Kenya Carpenter wrote: Dear R- Help When installing ggplot2 it seems to install correctly but then I can't load it. My R session is copied below. Can you help? See below install.packages(ggplot2) Installing package into ‘C:/Users/Kenya/Documents/R/win-library/3.1’

[R] installing Packages

Dear R- Help When installing ggplot2 it seems to install correctly but then I can't load it. My R session is copied below. Can you help? install.packages(ggplot2) Installing package into ‘C:/Users/Kenya/Documents/R/win-library/3.1’ (as ‘lib’ is unspecified) --- Please select a CRAN mirror

Re: [R] installing Packages

First look at the help page for install.packages: ?install.packages and read about the dependencies argument. Then try install.packages(ggplot2, dependencies=TRUE) -- Don MacQueen Lawrence Livermore National Laboratory 7000 East Ave., L-627 Livermore, CA 94550 925-423-1062 On

[R] Installing Packages from a Local Repository

Hi everyone, I've followed the instructions from R-Admin Section 6.6 for creating a local repository. I've modified my Rprofile.site file to add the local repository to my repos, but I haven't been able to successfully install my package from the repo. Here's the code that I've run.

Re: [R] Installing Packages from a Local Repository

You have to specify the repository as file:Q:/Integrated Planning/R (and I am not entirely sure if blanks are supported). Best, Uwe Ligges On 13.12.2012 11:52, Tommy O'Dell wrote: Hi everyone, I've followed the instructions from R-Admin Section 6.6 for creating a local repository. I've

Re: [R] Installing Packages from a Local Repository

On 15/12/2012 17:36, Uwe Ligges wrote: You have to specify the repository as file:Q:/Integrated Planning/R (and I am not entirely sure if blanks are supported). Actually, that's not right: see ?url. All URI schemes start like file:// . For Windows the help says In this form the path

[R] Installing Packages from a Local Repository

Hi everyone, I've followed the instructions from R-Admin Section 6.6 for creating a local repository. I've modified my Rprofile.site file to add the local repository to my repos, but I haven't been able to successfully install my package from the repo. Here's the code that I've run.

[R] Installing packages xslx on Ubuntu (32bit)

Hi, I just recently changed my OS to Ubuntu 12.04 (32bit). Now I tried to install some packages required by my old and working scripts. Unfortunately I fail when trying to install the package xslx. Maybe it is related to the 32bit version of my R (its not possible to install a 64 bit version).

Re: [R] Installing packages xslx on Ubuntu (32bit)

Hi Johannes, As the error message says, install the latest version of R! If you don't want to do it (I don't know why you wouldn't) I think you can also install the package from source if the old version of the package is still somewhere out there. HTH, Ivan -- Ivan CALANDRA Université de

Re: [R] Installing packages xslx on Ubuntu (32bit)

Hello, I was able to install it for R version 2.15.1, after reconfiguring R to enable the support of Java (R CMD javareconf) and installing rJava. Did you try after upgrading R? Regards. Pascal Le 25/07/2012 17:47, Johannes Radinger a écrit : Hi, I just recently changed my OS to Ubuntu

Re: [R] Installing packages xslx on Ubuntu (32bit) [On R 2.14.1]

Hmm, there is no such package: did you mean xlsx? However, your R is old and quite a few packages are not available for it. Please do as the posting guide suggests and update to R 2.15.1 (or R-patched). On 25/07/2012 09:47, Johannes Radinger wrote: Hi, I just recently changed my OS to

Re: [R] Installing packages xslx on Ubuntu (32bit) [On R 2.14.1]

Hi Hmm, there is no such package: did you mean xlsx? of course xlsx :), I upgraded to 2.15.1 and installed openjdk-6-jdk and run R CMD javareconf. Then I was successful in installing package xlsx. Thank you! /Johannes However, your R is old and quite a few packages are not available

Re: [R] Installing packages from RProfile.site file

On 17.07.2012 21:34, abhisarihan wrote: I am trying to install custom packages upon starting R. A lot of the code that is written by us right now is available for editing to the users. To try and protect the code, I am packaging the production level code and having the users install it on

Re: [R] Installing packages from RProfile.site file

abhisarihan, Please don't crosspost! http://stackoverflow.com/questions/11530800/installing-packages-from-rprofile-site-file Thanks, Garrett On Tue, Jul 17, 2012 at 2:34 PM, abhisarihan abhisari...@gmail.com wrote: I am trying to install custom packages upon starting R. A lot of the code that

[R] Installing packages from RProfile.site file

I am trying to install custom packages upon starting R. A lot of the code that is written by us right now is available for editing to the users. To try and protect the code, I am packaging the production level code and having the users install it on their machine during start up. However, when I

[R] Installing packages in R for UBUNTU

Hi. We downloaded R 2.13.1 for UBUNTU. We try to install several packages: car, maps, maptools, raster, and we found the following warning or error message: Error: **buffer overflow detected ***=/user/lib/R/bin/exec/R terminated*** We also found the usual error message that the packages are

Re: [R] Installing packages in R for UBUNTU

Hi! 2011/9/27 gbre...@ssc.wisc.edu: We downloaded R 2.13.1 for UBUNTU.  We try to install several packages: car, maps, maptools, raster, and we found the following warning or error message: I suggest to use apt-get (synaptic) as much as possible to install R packages and then use

[R] installing packages systemwide

I installed some downloaded packages in R. I always do $sudo R CMD INSTALL anRpackage.tar.gz By default it is storing these packages into my directory /home/mary/R/x86_64-pc-linux-gnu-library/2.13/. However I want them to be systemwide into /usr/local/lib/R/site-library/ folder. I tried $sudo

Re: [R] installing packages systemwide

Take a look at: R CMD INSTALL --help and you will realize that you need to specify the library path, e.g. R CMD INSTALL anRpackage --library=/usr/local/... or take a look at ?install.packages and use the second argument, e.g. install.packages('anRpackage', lib = '/usr/local/...') Regards,

[R] Installing packages

Hi, I am trying to install the network package at my work computer. I'm using R version 2.12.0 (2010-10-15) At home I can use the Package Installer, but at work this is blocked by our firewall. What I usually do is download the Mac binary and copy it to R.Framework/Resources/Library, but this

Re: [R] Installing packages

On Jun 24, 2011, at 4:29 AM, thomas.chesney wrote: Hi, I am trying to install the network package at my work computer. Which is a machine of what sort? (Most likely a Mac from subsequent error messages) I'm using R version 2.12.0 (2010-10-15) At home I can use the Package Installer,

[R] Installing Packages

Hi.. I am using R as a user, another group built everything I am using. But I need to install some packages and my only internet access is via a web-proxy. I have hunted though the docs and I'm not finding anything on setting a proxy in the package install command. Any help would be really

Re: [R] Installing Packages

Hi Sue, Try to download the packages through here http://cran.r-project.org/web/packages/ http://cran.r-project.org/web/packages/then r/packages/install packages from local zip files if you are running a script do not forget to cal them i hope that helps, N On Wed, Nov 10, 2010 at 12:26 PM,

Re: [R] Installing Packages

On 10/11/2010 12:26 PM, Caskey, Susan wrote: Hi.. I am using R as a user, another group built everything I am using. But I need to install some packages and my only internet access is via a web-proxy. I have hunted though the docs and I'm not finding anything on setting a proxy in the

[R] Installing packages and passing parameters

Hello I am trying to install the RandomFields package by using install.packages(RandomFields) but the process fails. I think that if I pass to the g++ compiler the -lgfortran option might work. Could you please help me do this? I would like to thank you in advance for your help Best Regards

Re: [R] Installing packages and passing parameters

PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. This suggests to tell us: OS? R version? Output you got so far? Best, Uwe Ligges On 05.08.2010 11:16, Alaios wrote: Hello I am trying to install

[R] installing packages over ssh without X forwarding

Hi, Is it possible to install packages without the testing if installed package can be loaded? I need to install bunch of packages on multiple computers over ssh. Some packages witch interact with X11 display cannot be installed in this way. for example after:

Re: [R] installing packages over ssh without X forwarding

On 09/07/2010 7:37 AM, p...@orbit.umbr.cas.cz wrote: Hi, Is it possible to install packages without the testing if installed package can be loaded? I need to install bunch of packages on multiple computers over ssh. Some packages witch interact with X11 display cannot be installed in this way.

[R] installing packages from a directory on the computer

i wish to know how to set a folder in computer as a mirror from which i can install packages i am aware of the menu approach- Packagesinstall from local zip files but i wish to know the command line approach because i dont have internet access on the computer where i will be using R. i have put

Re: [R] installing packages from a directory on the computer

On 2010-06-21 23:39, Subramanian S wrote: i wish to know how to set a folder in computer as a mirror from which i can install packages i am aware of the menu approach- Packagesinstall from local zip files but i wish to know the command line approach because i dont have internet access on the

[R] installing packages from a directory on the computer

i wish to know how to set a folder in computer as a mirror from which i can install packages i am aware of the menu approach- Packagesinstall from local zip files but i wish to know the command line approach because i dont have internet access on the computer where i will be using R. i have put

[R] installing packages from a directory on the computer

Peter, i tried the file.choose() method of installing from local zip files; its easy to install few packages that way. but you see if there are many packages(say 10 or 12), then i wont be able to install the packages on which the packages that i want to install depend because i guess i cant set

Re: [R] installing packages from a directory on the computer

On Jun 22, 2010, at 5:48 AM, Subramanian S wrote: Peter, i tried the file.choose() method of installing from local zip files; its easy to install few packages that way. but you see if there are many packages(say 10 or 12), then i wont be able to install the packages on which the packages

[R] Installing packages from folder on the computer

i am able to install zip files of packages from local zip files using the file.choose() for the package argument in install.packages() function in R console and also from the Packages menuinstall from local zip files. But if there are many packages to install (say 15 or 20), then i have to factor

Re: [R] installing packages from a directory on the computer

Okay, Subramanian S, try this: pkgs - c(pkg1, pkg2, pkg3) install.packages(pkgs, repos = NULL, contriburl = file:///c:/r/repos/2.12, dependencies = TRUE) where I've got zipfiles in c:/r/repos/2.12. Comments: 1. Note the 3 slashes after file:. 2. You will also

Re: [R] Installing packages from folder on the computer

On 22.06.2010 19:30, Subramanian S wrote: i am able to install zip files of packages from local zip files using the file.choose() for the package argument in install.packages() function in R console and also from the Packages menuinstall from local zip files. But if there are many packages to

[R] installing packages from a directory on the computer

i tried pkgs - c(pkg1, pkg2, pkg3) install.packages(pkgs, repos = NULL, + contriburl = file:///C:/R/packages/bin/windows/contrib/2.11, + dependencies = TRUE) i have put the zip files in C:/R/packages/bin/windows/contrib/2.11 *** and extracted the packages.gz

[R] Installing packages based on the license

Hello, I would like have an automatic way to avoid installing packages that I cannot use due to license restrictions. For example, the conf.design package is limited to non-commercial use, and since I work for a for-profit business, I cannot use it. I found out about the license terms of

Re: [R] Installing packages based on the license

On Wed, 26 Nov 2008, Ted Mendum wrote: Hello, I would like have an automatic way to avoid installing packages that I cannot use due to license restrictions. For example, the conf.design package is limited to non-commercial use, and since I work for a for-profit business, I cannot use it. I

Re: [R] Installing packages based on the license

On 26/11/2008 4:43 PM, Ted Mendum wrote: Hello, I would like have an automatic way to avoid installing packages that I cannot use due to license restrictions. For example, the conf.design package is limited to non-commercial use, and since I work for a for-profit business, I cannot use it.

[R] Installing Packages in Windows Vista -- YES I tried Run as Administrator

I'm having trouble installing packages in Windows Vista. It's driving me nuts. I read all the threads and I have tried the following: 1) Right click on R and Run as Administrator 2) Turn off User Account Control 3) Toss machine across room (OK haven't tried this one yet, but I'm close) Here is

Re: [R] Installing Packages in Windows Vista -- YES I tried Run as Administrator

Your issue is a corrupt download. Try another CRAN mirror. In any case, the current version of R includes that version of boot, so you need to update (before posting, as the posting guide asked you to). On Thu, 1 May 2008, Scotty Nelson wrote: I'm having trouble installing packages in

Re: [R] Installing Packages in Windows Vista -- YES I tried Run as Administrator

Hi Scotty, Can't give an answer from what you've provided, but one temp. work-around that might work is to get onto CRAN -- packages and download the packages you need from your web browser as zip files, then do an Install package(s) from local zip files... from the Packages menu. HTH, Mark.

[R] Installing packages

Hello, I have a problem when making packages with version 2.6.1. I have a package which I could install in version 2.5.1. I have made some modifications of the package, and I would like to install it to 2.6.1. I check the package with R CMD check, I build it with R CMD build and when I try to

[R] installing packages on OS X -- lgfortran problem

I am trying to install two packages that are not available at CRAN (rmutil, dna). When trying the R CMD INSTALL with either file, I get an error message that ends with /usr/libexec/gcc/i686-apple-darwin8/4.0.1/libtool: can't locate file for: -lgfortran