Now that I have installed R outside Program files to get past the
permissions problem, there are packages I can only access from certain
working directories:
setwd(U:/Calc/zTemp) # U: points to a USB hard drive
library(splines) # ok
library(locfdr)
Error in library(locfdr) : there is no
David Bickel wrote:
Now that I have installed R outside Program files to get past the
permissions problem, there are packages I can only access from certain
working directories:
setwd(U:/Calc/zTemp) # U: points to a USB hard drive
library(splines) # ok
library(locfdr)
Error in
Thank you, Prof. Murdoch. I have this:
.libPaths()
[1] \\Users\\dbickel/R/win-library/2.11 C:/R/R-2.11.1/library
Since the following naive line in the profile failed, I just moved the
new packages to the same directory as the default packages.
On 10/07/2010 10:37 AM, David Bickel wrote:
Thank you, Prof. Murdoch. I have this:
.libPaths()
[1] \\Users\\dbickel/R/win-library/2.11 C:/R/R-2.11.1/library
That first path doesn't look like it would work in Windows: it has no
drive letter, so its meaning will depend on the driver
Neither biocLite nor the GUI menus can install packages on my system.
Here is relevant output:
version
_
platform i386-pc-mingw32
arch i386
os mingw32
system i386, mingw32
status
major 2
minor 11.1
year 2010
month 05
day 31
svn rev 52157
language R
version.string R version 2.11.1 (2010-05-31)
Hi,
I am running Windows 7 and R 2.11.1, and everything is installing just
fine for me. Did you install R in the Program Files folder? If so,
uninstall and try to re-install R in another folder (e.g.
c:\R\R2.11.1\ like on my computer). I noticed in the past that the
access control of Windows
On 08/07/2010 7:15 AM, Dave Bickel wrote:
Neither biocLite nor the GUI menus can install packages on my system.
This is probably a permissions problem. Are you running R as an
administrator when you try the install? If not, you won't be able to
install to the default location, but you
As far as my experience goes, there is no need whatsoever to run R as
an administrator for installation of any package, including
BioConductor, provided you stay away from the Program Files folder.
Cheers
Joris
On Thu, Jul 8, 2010 at 2:55 PM, Duncan Murdoch murdoch.dun...@gmail.com wrote:
On
On 08/07/2010 9:26 AM, David Bickel wrote:
Yes, the User into which I logged in before launching RGui is an
Administrator. Correct, the problem is not limited to Bioconductor packages.
On Windows 7, it's not enough to have the user be an administrator, you
need to run programs specifically
Yes, the User into which I logged in before launching RGui is an
Administrator. Correct, the problem is not limited to Bioconductor packages.
David
On 08/07/2010 8:55 AM, Duncan Murdoch wrote:
On 08/07/2010 7:15 AM, Dave Bickel wrote:
Neither biocLite nor the GUI menus can install packages
Yes, the User into which I logged in before launching RGui is an
Administrator. Correct, the problem is not limited to Bioconductor packages.
David
On 08/07/2010 8:55 AM, Duncan Murdoch wrote:
On 08/07/2010 7:15 AM, Dave Bickel wrote:
Neither biocLite nor the GUI menus can install packages
Thanks, Joris. Your suggestion solved the problem without requiring me
to run R as an administrator.
Best regards,
David
On 08/07/2010 8:45 AM, Joris Meys wrote:
Hi,
I am running Windows 7 and R 2.11.1, and everything is installing just
fine for me. Did you install R in the Program Files
On Thu, Jul 8, 2010 at 3:39 PM, Duncan Murdoch murdoch.dun...@gmail.com wrote:
On 08/07/2010 9:26 AM, David Bickel wrote:
Yes, the User into which I logged in before launching RGui is an
Administrator. Correct, the problem is not limited to Bioconductor packages.
On Windows 7, it's not
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