I'm trying to snow working with openmpi and sge. Everything appears
to work, except, the program only runs on 2 node. If i tell snow to
run on 9 nodes, it spawns 9 processes on a single node. I'm at a loss
of ideas. Any help would be appreciated.
Setup: Rocks Cluster, OpenMPI, R 2.8.0, Snow,
Forgive the spam. Let me try that e-mail again.
I'm trying to get snow working with openmpi and sge. Everything
appears to work, except the program only runs on 1 node. If i tell
snow to run on 5 nodes, it spawns 5 processes on a single node, 6
nodes = 6 procs on 1 node and so on. I'm at a
Hi,
there is a new mailing list for R and HPC: [EMAIL PROTECTED]
This is probably a better list for your question. Do not forgett, first
of all you have to register: https://stat.ethz.ch/mailman/listinfo/r-sig-hpc
Did you tried to run openmpi and R without SGE?
Like this: orterun -n 1 R
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