Point 1 confirmed. It's an exhaustive permutation test.
On 2/11/19, 8:46 PM, "R-help on behalf of Bert Gunter"
wrote:
1. I believe Fisher's exact test is computationally intensive and takes a
lot of time for large structures, so I would say what you see is what you
should expect!
1. I believe Fisher's exact test is computationally intensive and takes a
lot of time for large structures, so I would say what you see is what you
should expect! (As I'm not an expert on this, confirmation or contradiction
by those who are would be appreciated).
2. Your second question on how to
Dear group,
I have two large matrices.
Matrix one: is 24776 x 76 (example toy1 dput object given below)
Matrix two: is 12913 x 76 (example toy2 dput object given below)
Column names of both matrices are identical.
My aim is:
a. Take each row of toy2 and transform vector into UP (>0) and DN
Thank you very much Jeff, Goran and David for your help.
On Mon, Feb 11, 2019 at 6:22 PM Jeff Newmiller wrote:
>
> N <- 8 # however many times you want to do this
> ans <- lapply( seq.int( N )
> , function( n ) {
> idx <- sample( nrow( mydat ) )
>
N <- 8 # however many times you want to do this
ans <- lapply( seq.int( N )
, function( n ) {
idx <- sample( nrow( mydat ) )
mydat[ idx[ seq.int( which( 40 < cumsum( mydat[ idx, "count" ]
) )[ 1 ] ) ], ]
}
)
On Mon, 11
Sorry Jeff and David for not being clear!
The total sample size should be at least 40, but the selection should
be based on group ID. A different combination of Group ID could give
at least 40.
If I select group G1 with 25 count and G2 and with 15 counts
then I can get a minimum of
On 2019-02-11 23:35, Val wrote:
Hi all,
I have a data frame with tow variables group and its size.
mydat<- read.table( text='group count
G1 25
G2 15
G3 12
G4 31
G5 10' , header = TRUE, as.is = TRUE )
How about
x <- sample(1:5)
total <- mydat$count[x[1]]
i <- 1
while (total < 40){
This constraint was not clear in your original sample data set. Can you expand
the data set to clarify how this requirement REALLY works?
On February 11, 2019 3:00:15 PM PST, Val wrote:
>Thank you David.
>
>However, this will not work for me. If the group ID selected then all
>of its
Thank you David.
However, this will not work for me. If the group ID selected then all
of its observation should be included.
On Mon, Feb 11, 2019 at 4:51 PM David L Carlson wrote:
>
> First expand your data frame into a vector where G1 is repeated 25 times, G2
> is repeated 15 times, etc.
First expand your data frame into a vector where G1 is repeated 25 times, G2 is
repeated 15 times, etc. Then draw random samples of 40 from that vector:
> grp <- rep(mydat$group, mydat$count)
> grp.sam <- sample(grp, 40)
> table(grp.sam)
grp.sam
G1 G2 G3 G4 G5
10 9 5 13 3
Hi all,
I have a data frame with tow variables group and its size.
mydat<- read.table( text='group count
G1 25
G2 15
G3 12
G4 31
G5 10' , header = TRUE, as.is = TRUE )
I want to select group ID randomly (without replacement) until the
sum of count reaches 40.
So, in the first case, the
even I tried to use another library mipfp to generate multivariate Bernoulli
*using the following:*
> p.joint <- ObtainMultBinaryDist(corr = corr_mat[1:10,1:10], marg.probs =
probs[1:10])
*it Shows:*
Problematic pairs:
row col
[1,] 10 9
[2,] 9 10
Warning messages:
1: In
Simple when you know how!
Thanks
Sent from mobile device - please excuse any spelling mistakes.
-- Original Message --
From: William Dunlap
To: Bernard McGarvey
Cc: Ivan Krylov, r-help@r-project.org
Sent: February 11, 2019 at 4:29 PM
Subject: Re: [R] Difficulty with "\\" in string
You can also avoid the issue by using the basename and dirname functions.
> Fname1 <- "D:\\Data\\OneDrive\\ISTA Documents\\QT_App\\QT Analysis Input
Data Example WorkBook.xlsx"
> basename(Fname1)
[1] "QT Analysis Input Data Example WorkBook.xlsx"
> dirname(Fname1)
[1] "D:/Data/OneDrive/ISTA
Brilliant! Thanks a million Ivan.
Lion Bernard McGarvey
Director, Fort Myers Beach Lions Foundation, Inc.
Retired (Lilly Engineering Fellow).
> On February 11, 2019 at 3:13 PM Ivan Krylov wrote:
>
>
> On Mon, 11 Feb 2019 15:01:16 -0500 (EST)
> Bernard McGarvey wrote:
>
> > Now I try to
On Mon, 11 Feb 2019 15:01:16 -0500 (EST)
Bernard McGarvey wrote:
> Now I try to split it using
>
>
> str_split(Fname1,"\\")
>
>
> but this returns an error
>
>
> Error in stri_split_regex(string, pattern, n = n, simplify =
> simplify, : Unrecognized backslash escape sequence in pattern.
>
I am using the file.choose() function to choose a file from the dialog box and
once I get it, I want to be able to split the full name into the folder part
and the file name part. So for example, when I have closed the file choose
dialog, the name for the file I get is
Fname1
[1]
Your example is not reproducible [1][2][3], you are reposting a copy of an
email in a fresh thread (instead of replying to the first one), and you are
using HTML email format on a text-only mailing list (what you see is really not
what we see). Please read the Posting Guide to find out what the
Hi guys,
I am trying to merge a list of .xls files in google drive. I have now managed
to create a list of all the files I need, but for some reason I still can't
manage to merge them, this is the code I have so far:
library(googledrive) inputfiles <- drive_ls(path = "Email It In", pattern =
Thanks a lot!
Il giorno lun 11 feb 2019 alle ore 14:39 Roger Koenker <
rkoen...@illinois.edu> ha scritto:
> A quick look at the code for Siegel in mblm reveals that it is extremely
> inefficient, but it seems to be correct.
> One “explanation” for this behavior, presuming that we haven’t
A quick look at the code for Siegel in mblm reveals that it is extremely
inefficient, but it seems to be correct.
One “explanation” for this behavior, presuming that we haven’t overlooked
something more basic, is that such
high breakdown estimates sacrifice some efficiency, that is to say, they
Pardon me, I forgot to add subject line.
-Adrian.
On Sun, Feb 10, 2019 at 3:49 PM Adrian Johnson
wrote:
>
> Dear group,
>
> I have two large matrices.
>
> Matrix one: is 24776 x 76 (example toy1 dput object given below)
>
> Matrix two: is 12913 x 76 (example toy2 dput object given below)
>
>
My first thought was also that this was an artifact of the ties, but dithering
the data
n <- length(child)
child <- child + runif(n,-.5,.5)
parent <- parent + runif(n,-.5,.5)
and rerunning yields the same discrepancy between the Siegel and other fits.
Curiously, both
lmsreg and ltsreg from MASS
Not really my field, but would you not approach this using FFT on selected
regions?
I think IMageJ has some capability in that area; see example at
https://imagej.nih.gov/ij/docs/examples/tem/.
Steve Ellison
> -Original Message-
> From: R-help [mailto:r-help-boun...@r-project.org]
On 11/02/2019 4:26 a.m., Rolf Turner wrote:
On 2/11/19 3:57 AM, Murris Johnson wrote:
Hi,
I have a quick question for you about a page on your site that briefly
mentions a data security topic,
https://stat.ethz.ch/pipermail/r-help/2008-May/162561.html.
I plan on writing a few guest
*Here Sample of Code for 10 variables:*
> probs_10 = probs[1:10]
> probs_10
[1] 9.795272e-01 9.331778e-01 6.764349e-01 9.884067e-02 9.52e-05
3.499417e-03 2.380556e-05 9.826457e-01 9.628633e-01 8.874949e-01
> corr_mat_10 = corr_mat[1:10,1:10]
> corr_mat_10
[,1] [,2]
I employed the "galton" set of data included in the package "psych". With
the package "mblm" I obtained the Theil-Sen nonparametric regression and
the Siegel non parametric regression, and compared them with the ordinary
least square regression line.
The results of standard regression and
Hi Eman,
It helps if you create a small example that reproduces the problem and then
post the code with your question.
This will help people determine what is causing the problem.
Best,
Eric
On Mon, Feb 11, 2019 at 11:52 AM إيمان إسماعيل محمد <
emanismail...@gmail.com> wrote:
> I need to
Just read the complete thread.
That will clarify.
Nothing wrong with R or RGUI; the virus checker is wrong.
regards,
Berend Hasselman
> On 10 Feb 2019, at 15:57, Murris Johnson wrote:
>
>
>
> Hi,
>
>
> I have a quick question for you about a page on your site that briefly
> mentions a
I need to simulate data for 2000 binary variables given a vector of
marginal probabilities and a correlation matrix. I used bindata library,
but it give me
Not all probabilities are between 0 and 1.
Error in Element ( i , j ): Admissible values are in [.].
Error in
On 2/11/19 3:57 AM, Murris Johnson wrote:
Hi,
I have a quick question for you about a page on your site that briefly
mentions a data security topic,
https://stat.ethz.ch/pipermail/r-help/2008-May/162561.html.
I plan on writing a few guest authored articles in the next month or so
that
Hi,
I have a quick question for you about a page on your site that briefly
mentions a data security topic,
https://stat.ethz.ch/pipermail/r-help/2008-May/162561.html.
I plan on writing a few guest authored articles in the next month or so
that talk about data security & breaches, are
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