The differential equations solvers (LSODA, etc.) used in Matlab are all
available in R. You may need to set-up the equations yourself, from a
format such as SBML. The capability is all there in R - maybe just not
as nicely packaged and pre-digested as Matlab. If you access to
programming resources, choose R.
Regards,
- Sanjay
mau...@alice.it wrote:
Is there any R package that implements the same capability of MatLab toolbox
called SimBiology ?
We are expecially interested in protein-protein interactions and network
analysis.
As far as I know SimBiology implements a system of ODEs reflecting the kinetic
chemical reactions.
We would be more interested in stochastic simulations.
Thank you in advance.
Maura
tutti i telefonini TIM!
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