On 18 Jun 2004, at 8:26, Deepayan Sarkar wrote:
On Thursday 17 June 2004 22:57, Patrick Bennett wrote:
yes, i can reproduce that same graph when i print to the pdf-device.
but the panel titles do not appear when I print to the Quartz-device.
Hmm. I won't be able to help you then, let's hope
Hi,
I'm a sysadmin who's been tasked with installing R on our 1000-node
compute cluster.
I have licences for the Intel C and FORTRAN compilers, so I'm using the
following to compile:
CFLAGS=-O2 -axWK
FFLAGS=$CFLAGS
CXXFLAGS=$CFLAGS
CC=icc
F77=ifort
CXX=icc
FPICFLAGS=-fpic
./configure
What OS and hardware is this? Eventually you mention `X86 Linux' but are
you using x86 Linux and if so how fast processors? On a 3GHz machine make
check takes a couple of minutes using gcc (and in our experience Portland
Group is faster than gcc -- we have not tried Intel as local advice
On 18-Jun-04 Fred wrote:
I want to get linearly independent vectors, not orthogonal ones.
The functions eigen, svd, I think it may provide orthogonal
vectors which are not what I expect.
It depends what sort of characteristics you want your non-orthogonal
linearly independent vectors to have.
I am wanting to plot pca loadings onto sites superimposed on a contour
map. There are a maximum of 20 sites at which loadings might appear -
however due to the nature of my data, missing data has meant that some
stations have not been included in some of the pca.
For example, I am performing pca
I presume I am not alone in receiving return-to-sender mailings provoked
by a well known virus eg
[EMAIL PROTECTED]
(reason: 550 [EMAIL PROTECTED]... User unknown)
[EMAIL PROTECTED]
(reason: 550 [EMAIL PROTECTED]... User unknown)
[EMAIL PROTECTED]
(reason: 550 [EMAIL PROTECTED]...
Hi all
a week ago, I posted a newbie question in data smoothing
maximum-extraction with R. I got quite a lot of response, but I'm still
kinda stuck with it...
I'll restate the problem : i got a datafile with 2400 measuerements (every
250msec) of a CO2 measurement device, capturing the breath of
On Thu, 17 Jun 2004, Dr. Herwig Meschke wrote:
Why not try to avoid binning (and density plot) at all? An alternative
could be a qqplot (as a log-log-plot), e.g.
plot(ppoints(length(x4)), x4[order(x4)], log=xy)
abline(lm(log(x4[order(x4)])~log(ppoints(length(x4, col=red)
If the assumptions
Dear Cutts and Prof. Ripley,
On Fri, Jun 18, 2004 at 09:11:42AM +0100, Prof Brian Ripley wrote:
Some benchmarks show icc is faster than gcc and pgcc. Even
fortran compiler ifort is also faster than pgf77 (See the
result on www.polyhedron.com). But I still recommend gcc
and g77 as c and fortran
Sorry, I was a bit sparing with details. Early in the morning, and all
that.
Many thanks for the swift reply!
On 18 Jun 2004, at 9:11 am, Prof Brian Ripley wrote:
What OS and hardware is this?
Hardware: 700+ machines are 800 MHz Pentium III, 1 GB RAM, Red Hat 7.2
168 machines are
On Fri, 18 Jun 2004, Tim Cutts wrote:
Sorry, I was a bit sparing with details. Early in the morning, and all
that.
Many thanks for the swift reply!
On 18 Jun 2004, at 9:11 am, Prof Brian Ripley wrote:
What OS and hardware is this?
Hardware: 700+ machines are 800 MHz Pentium III,
On 18 Jun 2004, at 11:58 am, Prof Brian Ripley wrote:
Fine. The issue on gcc 3.4.0 is that if you compile
src/modules/lapack/dlamc.f without -ffloat-store it loops forever.
I suspect you need to compile it without optimization or with the
equivalent of -ffloat-store. It's a separate file in
I have just upgraded from rw1081 to rw1090 (using Windows 2000).
Now when I type the command:
setwd('d:/folder_name)
I get the following error message:
Error in setwd(dir) : cannot change working directory
If I use the change dir tab in the file menu i can sucessfully change
working
Try adding a missing singe quote (') at the end of your working directory.
setwd('d:/folder_name')
S.
-Original Message-
From: [EMAIL PROTECTED]
[mailto:[EMAIL PROTECTED] On Behalf Of Louize Hill
Sent: Friday, June 18, 2004 13:38
To: [EMAIL PROTECTED]
Subject: [R] set working
Bashir Saghir (Aztek Global) wrote:
Try adding a missing singe quote (') at the end of your working directory.
setwd('d:/folder_name')
Well, that was a mispelling in the mail, but not in the real example,
since not specifying the quote causes a syntax error.
I'm quite sure the folder-name was
Thank you Brian,
Installing 0.8 first and then upgrading solved the problem.
I noticed that installing 0.9 from scratch creates a registry key
[HKEY_LOCAL_MACHINE\SOFTWARE\mozilla.org\Mozilla]
CurrentVersion=1.7
Installing 0.8 creates
[HKEY_LOCAL_MACHINE\SOFTWARE\mozilla.org\Mozilla]
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https://www.stat.math.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html
Hi all,
this may be a 'stupid' question, but it would be great if it exists. What's it about?
For the control of experiments, special (and expensive) software is often necessary.
The main 'difficulty' I have is to read data from different (measurement) devices and
send them to some actuators
On Fri, 2004-06-18 at 09:28, Jari Oksanen wrote:
On 18 Jun 2004, at 8:26, Deepayan Sarkar wrote:
On Thursday 17 June 2004 22:57, Patrick Bennett wrote:
yes, i can reproduce that same graph when i print to the pdf-device.
but the panel titles do not appear when I print to the
What OS is this? How do you access a serial port? On most modern OSes
user processes such as R have no direct access to serial ports. If access
is via a Unix device, binary connections will probably work.
In my limited experience that expensive software runs under a low-level
OS, MS-DOS or a
russell alexander wrote:
Hello,
I'm writing about msm. It may be that consistent users of Markov models have a good idea as to what constitutes workable data for a model. I think of general rules, in basic statistical studies where n is limited to exclude fairly precise figures in the lower
Greetings to all and apologies for any cross-postings. If you know of anyone
else who could benefit from this announcement please forward to them. Best
regards and good luck to everyone, Michael O'Connell.
BioConductor Project and Insightful Corp. Collaboration Announcement
This week, Insightful
I' ve seen that several people are looking for a function that creates a
barplot with an error indicators (I was one of them myself). Maybe you will
find the following code helpful (There are some examples how to use it at
the end):
# Creates a barplot.
#bar.plot() needs a datavector for the
On Fri, 18 Jun 2004, Jari Oksanen wrote:
On 18 Jun 2004, at 8:26, Deepayan Sarkar wrote:
On Thursday 17 June 2004 22:57, Patrick Bennett wrote:
yes, i can reproduce that same graph when i print to the pdf-device.
but the panel titles do not appear when I print to the Quartz-device.
Hi!
Would like to initialize a huge matrix.csc (Pacakge SparseM) with all elements 0
and afterwards set a few alements nonzero.
The matrix which I like to allocate is so huge that I can not use
A - matrix(a,n1,p)
before:
A.csr - as.matrix.csc(A)
because I can not allocate such a huge matrix A.
A - as.matrix.csr(0,5,4)
A
An object of class matrix.csr
Slot ra:
[1] 0
Slot ja:
[1] 1
Slot ia:
[1] 1 2 2 2 2 2
Slot dimension:
[1] 5 4
A[3,4] - 3
A
An object of class matrix.csr
Slot ra:
[1] 0 3
Slot ja:
[1] 1 4
Slot ia:
[1] 1 2 2 3 3 3
Slot dimension:
[1] 5 4
as.matrix(A)
[,1] [,2]
[EMAIL PROTECTED] wrote:
I' ve seen that several people are looking for a function that creates a
barplot with an error indicators (I was one of them myself). Maybe you will
find the following code helpful (There are some examples how to use it at
the end):
# Creates a barplot.
#bar.plot() needs
Hi,
installation of RSPerl works fine without errors.
Running RSPerl does not work at all.
If I start R, and then enter this command:
library(RSPerl)
this error appears:
-
library(RSPerl)
Error in dyn.load(x, as.logical(local), as.logical(now)) :
unable to
On Thu, 17 Jun 2004, Thomas Lumley wrote:
On Wed, 16 Jun 2004, Prof Brian Ripley wrote:
You will have to tell us more. Exporting how: to what format using what
device and what exact command on what operating system?
The only device I know of that even knows about dpi is bitmap() and
Dear all,
-Original Message-
From: Frank E Harrell Jr [SMTP:[EMAIL PROTECTED]
Sent: Friday, June 18, 2004 4:48 PM
To: [EMAIL PROTECTED]
Cc: [EMAIL PROTECTED]
Subject: Re: [R] Barplots and error indicators: Some R-Code
Bar charts have many problems as pointed out in Bill
Exactly the same question was asked here by
From: Emmanuel Engelhart [EMAIL PROTECTED]
Date: Fri, 11 Jun 2004 13:31:17 +0100
so please talk to your colleagues (and note what
PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html
says about doing your homework).
Note
I agree with Uwe: I just tried setwd missing a quote in R
1.9.1 alpha and got syntax error. When I had quotes paired but the
name was not a valid directory, I got the error Louize reported: Error
in setwd(dir) : cannot change working directory. When I gave a valid
directory, the
Rau, Roland wrote:
Dear all,
-Original Message-
From: Frank E Harrell Jr [SMTP:[EMAIL PROTECTED]
Sent: Friday, June 18, 2004 4:48 PM
To: [EMAIL PROTECTED]
Cc: [EMAIL PROTECTED]
Subject:Re: [R] Barplots and error indicators: Some R-Code
Bar charts have many problems as
Dear R users,
I've written a loop to generate Moran's test (spdep package) on serval
subsamples of a large dataset. See below a short example.
My loop is working fine, however I would like to be able to store the test
results as lines of a matrix, that I would latter be able to export as a
Hi,
I have a dataframe with 3 columns: month (1 to 12), length and length class.
I'm trying to make a cross table with the counts of lengths per length class
and month. I don´t have all classes per month.
| 1 2 3 ...
-
120 | 0 1 0
150 | 5 6 0
170 | 3 0 7
...
I have already
Hi,
I'm a very fresh newbie to R.
My first main question is, what the limitations of R are, what methods can R
NOT do, esp. compared to (a) SPSS and (b) SAS?
The second question is, how do you handle the data entry, data management
and data manipulation in R, to me it seems to be really
I recently upgraded from R 1.8 to 1.9. I removed 1.8 following the
instructions. Html help has not worked since. When htmlhelp=TRUE the
help.start() command results in the patience message and nothing else
happens. I am using mac osx 10.3.4. Help worked fine when I was using R 1.8.
I need help
Dear All
do you know how to transform a matrix to a so-called double centering
matrix such that sum(col) and sum(row) of the transformed matrix are all 0
vector.
thanks
regards
yong wang
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On Wednesday 16 of June 2004 14:42, Wolski wrote:
sqlQuery(channel, select dir, c \
from firsthit3 \
where dir LIKE \%SCHULEN%\)
Another option is paste(). This works for me (selectedCities is a constant
set outside of this function):
getData -
On Wednesday 16 of June 2004 21:23, Dirk Eddelbuettel wrote:
That may be related. I only recently set R_PAPERSIZE to be driven from
Debian's global paperconf setting which is supposed result in
/etc/R/Renviron having
## edd Apr 2004: use Debian's paperconf settings, with thanks to Matej
?sweep
Date: Fri, 18 Jun 2004 16:32:58 -0500 (CDT)
From: Yong Wang [EMAIL PROTECTED]
To: [EMAIL PROTECTED]
Subject: [R] Double centering matrix construction
Dear All
do you know how to transform a matrix to a so-called double centering
matrix such that sum(col) and sum(row) of
PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html
What have you tried? In particular, have you tried table? Dates and times may present difficulties, but help.search('table') in R 1.9.1 alpha under Windows 2000 just produced a number of options.
SPSS and SAS are data analysis packages with some scripting
capabilities. The S language is an object oriented programming language
for statistics. If you want to analyze data using traditional
techniques, use SPSS or SAS or Statistica or Excel or you-name-it. If
you need to invent new
On Fri, Jun 18, 2004 at 05:26:26PM +0200, Matej Cepl wrote:
On Wednesday 16 of June 2004 21:23, Dirk Eddelbuettel wrote:
That may be related. I only recently set R_PAPERSIZE to be driven from
Debian's global paperconf setting which is supposed result in
/etc/R/Renviron having
## edd
Hi,
This works
setGeneric(clear, function(obj) standardGeneric(clear))
[1] clear
but this doesn't. Why?
funName - clear
setGeneric(funName, function(obj) standardGeneric(funName))
Error in .recursiveCallTest(body, fname) :
(converted from warning) The body of the generic function for
This is a correction to my previous message, I forgot to swap two lines
in the body of setMakeGenericMethod. Sorry about that. The correct (full
message) reads like this:
Hi,
This works
setGeneric(clear, function(obj) standardGeneric(clear))
[1] clear
but this doesn't. Why?
funName -
On Fri, 18 Jun 2004, F.Kalder wrote:
I'm a very fresh newbie to R.
First piece of advice: read the posting guide before posting, and in
particular use a meaningful subject line.
My first main question is, what the limitations of R are, what methods can R
NOT do, esp. compared to (a) SPSS
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