Re: [R] recompile R using ActiveTcl

2007-06-03 Thread Peter Dalgaard
James Foadi wrote: Dear all, While running some code requiring the tcltk package I have realised that my version of R was compiled with the Tcl/Tk libraries included in Fedora 6. It would be for me better to use the ActiveTcl libraries (which I have under /usr/local), and I'm aware that

[R] Subscript in axis label

2007-06-03 Thread pm509
Dear R help list members, I am experiencing difficulty in trying to generate a subscript '2' in an axis label. Although I can get the '2' into a subscript using expression(), R then forces me to leave at least one space between the '2' and the following character. My label is supposed to read

Re: [R] Subscript in axis label

2007-06-03 Thread Tobias Verbeke
[EMAIL PROTECTED] wrote: Dear R help list members, I am experiencing difficulty in trying to generate a subscript '2' in an axis label. Although I can get the '2' into a subscript using expression(), R then forces me to leave at least one space between the '2' and the following

Re: [R] specify font family for postscript device [was: Re: Subscript in axis label]

2007-06-03 Thread Tobias Verbeke
[EMAIL PROTECTED] wrote: Dear R help list members, snip A related query is that the journal I want to publish this figure in specifies that if EPS format is used, the font should be either Arial, Courier, Helvetica, Times or Symbol. Is one of these the default font for an EPS file in R,

Re: [R] Problems compiling RMySQL

2007-06-03 Thread Duncan Murdoch
On 02/06/2007 11:33 PM, David James wrote: Hi, The error is coming from the FIND command (and in upper case, hmm). I'd suggest making sure you are using the right find. Yes, that's a sign that the PATH is not set the way the R tools need it. See the Windows toolset section of the

Re: [R] ODP: Updating R version

2007-06-03 Thread Uwe Ligges
Bojanowski, M.J. (Michal) wrote: Is R not loading the packages at all (like they were never installed), or perhaps it is complaining that they were build on the older version of R? You have to be more specific here about what happens etc. For now try running update.packages and see if it

Re: [R] Problems compiling RMySQL

2007-06-03 Thread Uwe Ligges
David James wrote: Hi, The error is coming from the FIND command (and in upper case, hmm). I'd suggest making sure you are using the right find. You do this by following the R Installation and Administration manual which tells you to have the R tools in your PATH prior to the Windows

Re: [R] Subscript in axis label

2007-06-03 Thread Peter Dalgaard
Tobias Verbeke wrote: [EMAIL PROTECTED] wrote: Dear R help list members, I am experiencing difficulty in trying to generate a subscript '2' in an axis label. Although I can get the '2' into a subscript using expression(), R then forces me to leave at least one space between the '2' and

Re: [R] Beginners Question

2007-06-03 Thread Thomas Zastrow
Thank you very much for your answer. Isn't it possible to tell the isoMDS function that it should ignore doubled values with the same value? Or is there a possible to delete all the doubled values from the x.dist? Best regards, Tom Prof Brian Ripley schrieb: That two distances are the same

Re: [R] Beginners Question

2007-06-03 Thread Prof Brian Ripley
Please _do_ read the message. Only you are talking about 'doubled values': the error report is about 'zero or negative distance' What the help page says is d: distance structure of the form returned by 'dist', or a full, symmetric matrix. Data are assumed to be

Re: [R] Standard errors of the predicted values from a lme (or lmer)-object

2007-06-03 Thread Michael Kubovy
On Jun 1, 2007, at 6:08 AM, Dieter Menne wrote: Fränzi Korner fraenzi.korner at oikostat.ch writes: how do I obtain standard errors of the predicted values from a lme (or lmer)-object? Not totally clear what you mean. intervals(lmeresult) gives the confidence intervals for the

[R] factor analysis

2007-06-03 Thread bunny , lautloscrew.com
Hi there, i´ve trouble understanding the factanal output of R. i am running a a FA on a dataset with 10 variables. i plotted eigenvalues to finde out how many factors to try. i think the elbow is @ 3 factors. here are my eigenvalues: 2.6372766 1.5137754 1.0188919 0.8986154 0.8327583 0.7187473

Re: [R] Re : I need some help please!

2007-06-03 Thread J . delasHeras
Quoting Bernard Colin [EMAIL PROTECTED]: To whom it may concern, I want to plot two or more graphics in the same window by the means of the plot command. To do that, I have tried the add=TRUE option, but this last one does not work! Do you have an hint for me please? Thank you very much

[R] I put your link, r-project.org, on my site under Lead Generation Mailing Lists

2007-06-03 Thread Matt
Hi it's Matt. I saw your site, http://www.r-project.org/, on Google under: Lead Generation Mailing Lists I see that your site has an Alexa ranking of 79275. Not bad! I have placed a link to your site in the Lead Generation Mailing Lists section of my site. You can check it out at:

Re: [R] R's Spearman

2007-06-03 Thread Raymond Wan
Dear Frank and Felipe, Thank you both for your replies. The code looks exactly like the formula in Japanese wikipedia which I was trying to make sense of (as it wasn't in English wikipedia). Thank you for sharing your code with, Felipe! And the clarification, Frank. Knowing many ways of

[R] How to use density function to find h_{k}

2007-06-03 Thread Patrick Wang
Hi, All: How can I use the density function to find the minimum of the bandwidth make the density function one mode, 2 mode, 3 mode etc. usually the larger the bandwidth, the fewer mode of the density. less bumpy. It will be impossible to try all possible bandwidths to then plot the pdf to

Re: [R] How to use density function to find h_{k}

2007-06-03 Thread Roger Koenker
You might try: http://www.stanford.edu/~kasparr/software/silverman.r But take a look at the referenced paper by Silverman first. You could also try the CRAN package ftnonpar by Kovac and Davies. url:www.econ.uiuc.edu/~roger/my.htmlRoger Koenker email [EMAIL PROTECTED]

[R] Error loading RMySQL

2007-06-03 Thread Paulino Perez Rodriguez
Hello, I have sucessfully compiled and Installed in R-2.4.1/2.5.0 under Windows XP MCE, I am using MySQL 5.0.41, but now I have another error, at load time: library(RMySQL) Error in dyn.load(x, as.logical(local), as.logical(now)) : unable to load shared library

[R] codamenu crash

2007-06-03 Thread Pablo G Goicoechea
Dear R users: I am a newby to R, under Windows XP. Sorry if my question is too obvious, but I have not found any answer in the archives. I was using the R-Coda package with R version 2.4.1 and everything was going OK. After upgrading to R v.2.5.0, I receive the following error message when

[R] making a multiple censored Surv object to survival analisys

2007-06-03 Thread Jose Bustos Melo
Hi R-survivals, I looking for a way to make a Surv object, with a multiple censored data. I'm trying with data from KMsurv library. The data lung is a good reference, to make this. I have this senteces, library(KMsurv) library(survival) data(lung) names(lung) ##time

[R] getting t.test to work with apply()

2007-06-03 Thread Andrew Yee
Hi, I'm interested in using apply() with t.test() on a data.frame. Specifically, I'd like to use apply() to do the following: t.test(raw.sample[1,alive],raw.sample[1,dead]) t.test(raw.sample[2,alive],raw.sample[2,dead]) t.test(raw.sample[3,alive],raw.sample[3,dead]) etc. I tried the

[R] RMySQL loading error, mysql in path

2007-06-03 Thread Paulino Perez Rodriguez
I have successfully installed RMySQL_0.6-0 using under Windows XP MCE, I am using MySQL 5.0.41, I have added I have added C:\Program Files\R\R-2.4.1\library\RMySQL\libs and mysql to the windows PATH, but again, same error: and then when I load R and try to use RMySQL library(RMySQL) Error

[R] [R-pkgs] Updated reshape and ggplot

2007-06-03 Thread hadley wickham
Hi everyone, This is a short announcement for the users of ggplot and reshape. I have just released new versions of each that fix bugs when used with R 2.5.0: * reshape was having problems with missing combinations of variables * errorbars in ggplot weren't working. I've you've been having

[R] [R-pkgs] Beta version of ggplot2

2007-06-03 Thread hadley wickham
Dear all, I am pleased to announce the new beta release of ggplot2. ggplot2 is a plotting system for R, based on the grammar of graphics, which tries to take the good parts of base and lattice graphics and none of the bad parts. It takes of many of the fiddly details that make plotting a hassle