Re: [R] lattice panel.lmline problem

2007-09-10 Thread Deepayan Sarkar
On 9/10/07, Ross Darnell [EMAIL PROTECTED] wrote: Thanks Frede I didn't know about the r type. For the record, this is probably what you wanted: xyplot(... panel = panel.superpose, panel.groups = function(x, y, ...) { panel.xyplot(x, y, ...) if (length(x)

Re: [R] labelling specific points xyplot

2007-09-06 Thread Deepayan Sarkar
On 9/6/07, GOUACHE David [EMAIL PROTECTED] wrote: Hello R-helpers, I'm trying to add labels to points in xyplot graphs, but I want lo label only those points which have a certain level of my grouping variable, and have encountered a few problems. An example dataframe that goes with the

Re: [R] [Lattice] Incrase the height of strips in Trellis plots

2007-09-05 Thread deepayan . sarkar
On 9/5/07, Frede Aakmann Tøgersen [EMAIL PROTECTED] wrote: This should give you something close to what you want: xyplot(Petal.Length ~ Petal.Width | Species, iris, strip = strip.custom(par.strip.text = list(cex = 2)), par.settings = list(layout.heights=list(strip=1.45))) The

Re: [R] Multiple xyplots

2007-09-05 Thread deepayan . sarkar
On 9/5/07, Tom Wright [EMAIL PROTECTED] wrote: Hi everyone, I'm hoping you can give me some pointers. I have a requirement to draw multiple (103) xy line plots onto one output device. Ideally the plots should be displayed in a hexagonal grid (example at www.maladmin.com/example.jpg). I can

Re: [R] Lattice: key with expression function

2007-09-05 Thread deepayan . sarkar
On 9/5/07, Folkes, Michael [EMAIL PROTECTED] wrote: HI all, I'm trying (unsuccessfully) to add the degree symbol to each line of text in my legend (within xyplot). Here is the line of code, which fails to interpret the expression function: auto.key =list(points =

Re: [R] lattice xyplot with bty=l

2007-09-04 Thread Deepayan Sarkar
On 9/4/07, Patrick Drechsler [EMAIL PROTECTED] wrote: Hi, what is the correct way of removing the top and right axes completely from a lattice xyplot? I would like to have a plot similar to using the bty=l option for traditional plots. There is no direct analog (and I think it would be weird

Re: [R] Lattice: panel superpose with groups

2007-09-04 Thread Deepayan Sarkar
On 9/4/07, Folkes, Michael [EMAIL PROTECTED] wrote: The example code below allows the plotting of three different groups per panel. I can't fathom how to write the panel function to add an additional line for each group, which in this case is just the mean Y value for each group within

Re: [R] Lattice: panel superpose with groups

2007-09-04 Thread Deepayan Sarkar
On 9/4/07, Folkes, Michael [EMAIL PROTECTED] wrote: Thank you again Deepayan. I was failing to grasp that I could use panel.groups as a function. But additionally it's still not intuitive to me where and when I should use ... to pass arguments on. In most cases, it's used to pass on

Re: [R] plotting predicted curves with log scale in lattice

2007-09-03 Thread Deepayan Sarkar
On 9/3/07, Ken Knoblauch [EMAIL PROTECTED] wrote: Hi, I was taken off guard by the following behavior in a lattice plot. I frequently want to add a predicted curve defined at more points than in the formula expression of xyplot. There have been numerous examples of how to do this on r-help,

Re: [R] Bug?

2007-08-31 Thread Deepayan Sarkar
On 8/31/07, Uwe Ligges [EMAIL PROTECTED] wrote: Johanna Hasmats wrote: Hi! How can I get around in R 2.5.1 in Windows: Error in strsplit(linebuffer, ) : object linebuffer not found Why should this be a bug in R, if you have no object named linebuffer in the environments

Re: [R] Additions to xyplot (lattice)? - legend, ticks, axis label size, text

2007-08-31 Thread Deepayan Sarkar
On 8/31/07, Dave Hewitt [EMAIL PROTECTED] wrote: At 12:47 PM 8/30/2007 -0700, [EMAIL PROTECTED] wrote: On 8/30/07, Dave Hewitt [EMAIL PROTECTED] wrote: Thank you very much... simple and easy fixes. Threefinal queries: (1) I need to make a little more room on the left for the

Re: [R] Need help putting histograms on the diagonal of a splom plot

2007-08-31 Thread Deepayan Sarkar
On 8/30/07, Marc Paterno [EMAIL PROTECTED] wrote: Hello, I am in need of help in putting histograms on the diagonal of a plot produced with splom(). The plot matrix I am trying to produce is to have standard scatterplots in the upper-left triangle, contour plots in the lower-right triangle,

Re: [R] Lattice:can't subset in panel function using other variables

2007-08-31 Thread Deepayan Sarkar
On 8/30/07, Folkes, Michael [EMAIL PROTECTED] wrote: I've succeeded doing a subset within the panel function of xyplot - if I'm subsetting based on either the value of 'x' or 'y' (e.g. below). However, I wish to subset based on the value of another variable and colour that one plotted

Re: [R] Sweave rendering of simple character

2007-08-31 Thread Deepayan Sarkar
On 8/31/07, Ken Knoblauch [EMAIL PROTECTED] wrote: Hi, When I compile the construction \begin{Scode}{eval=FALSE} ?HSP \end{Scode} with Sweave and latex, it outputs in the pdf as, `?` (HSP) which is not incorrect but a bit more formal than I wanted for demonstrating the use of the

Re: [R] Assigning line colors in xyplot

2007-08-31 Thread Deepayan Sarkar
On 8/31/07, Christof Bigler [EMAIL PROTECTED] wrote: The suggestions by Deepayan Sarkar and Hadley Wickham work for that case, but I get into troubles when I try to draw e.g. a panel for A and B: xyplot(y ~ x | f , groups=g, data=tmp,type=l, par.settings=list(superpose.line=list(col=c

Re: [R] Lattice:can't subset in panel function using other variables

2007-08-31 Thread Deepayan Sarkar
On 8/31/07, Folkes, Michael [EMAIL PROTECTED] wrote: Thanks Deepayan for your response. The first subset you suggest was just a test for me and not what I wanted. I can't do your second suggested subset action as I wish to plot all the panel data, but then add a coloured datapoint for just

Re: [R] xyplot() groups scope issue

2007-08-30 Thread deepayan . sarkar
On 8/30/07, Mike Lawrence [EMAIL PROTECTED] wrote: Hi all, Tinkering with a wrapper for xyplot that will help me plot a bunch of plots in a data analysis I'm doing and I ran into an odd error that I'm guessing is a scope issue. Here's a very simple version of the code: It's indeed a scoping

Re: [R] Assigning line colors in xyplot

2007-08-30 Thread deepayan . sarkar
On 8/30/07, Christof Bigler [EMAIL PROTECTED] wrote: Hi, I have a dataframe containing data from individuals 1, ..., 12 (grouping variable g in the data frame below), which belong either to A or B (grouping variable f): set.seed(1) tmp - data.frame(

Re: [R] Additions to xyplot (lattice)? - legend, ticks, axis label size, text

2007-08-30 Thread deepayan . sarkar
On 8/30/07, Dave Hewitt [EMAIL PROTECTED] wrote: I have created an xyplot of a time series with the following code... win.graph(width = 10, height = 7) panel1 = function(x, y) { panel.loess(x, y, lwd=2.5, span=0.5, col=gray) panel.xyplot(x, y, pch=19, col=blue, cex=1.25)

Re: [R] Additions to xyplot (lattice)? - legend, ticks, axis label size, text

2007-08-30 Thread deepayan . sarkar
On 8/30/07, Dave Hewitt [EMAIL PROTECTED] wrote: Thank you very much... simple and easy fixes. Threefinal queries: (1) I need to make a little more room on the left for the larger axis label. I tried 'mex' in the list for ylab but that was ignored. It's possible, but shouldn't be necessary.

Re: [R] customizing the color and point shape for each line drawn using lattice's xyplot

2007-08-30 Thread deepayan . sarkar
On 8/29/07, Gen [EMAIL PROTECTED] wrote: Description of what I am trying to do: I am using the xyplot code below to plot the variable MeanBxg against the variable PercentVarExplained for all 9 possible combinations of variables bdg and bdx. Within each of these 9 scenarios I am plotting a

Re: [R] FAQ 7.x when 7 does not exist. Useability question

2007-08-23 Thread Deepayan Sarkar
On 8/23/07, Duncan Murdoch [EMAIL PROTECTED] wrote: On 8/23/2007 11:28 AM, Prof Brian Ripley wrote: On Thu, 23 Aug 2007, John Kane wrote: The FAQ Section 7 is a very useful place for new users to find out any number of R idiosycracies. However there is no numbering on the FAQ Table of

Re: [R] small issue with densityplot

2007-08-21 Thread Deepayan Sarkar
On 8/21/07, Horace Tso [EMAIL PROTECTED] wrote: Hi folks, This is really minor but to someone not familiar with the various tentacles of the lmer package it could be really annoying. I was trying to plot the posterior density of the fixed effect parameters of a lmer model, hr.mcmc =

Re: [R] Stacked Bar

2007-08-21 Thread Deepayan Sarkar
On 8/21/07, Stephen Tucker [EMAIL PROTECTED] wrote: I think you want to use the 'density' argument. For example: barplot(1:5,col=1) legend(topleft,fill=1,legend=text,cex=1.2) par(new=TRUE) barplot(1:5,density=5,col=2) legend(topleft,fill=2,density=20,legend=text,bty=n,cex=1.2) (if you

Re: [R] small issue with densityplot

2007-08-21 Thread Deepayan Sarkar
On 8/21/07, Douglas Bates [EMAIL PROTECTED] wrote: On 8/21/07, Horace Tso [EMAIL PROTECTED] wrote: Deepayan, you're right. Now I realize anyone could write a densityplot function to apply on a different class of objects. I guess I should write to the author of lme4 which from what I could

Re: [R] to combine bwplot + srt option?

2007-08-16 Thread Deepayan Sarkar
On 8/16/07, KOITA Lassana - STAC/ACE [EMAIL PROTECTED] wrote: Thank you for you quite and useful explanation. And do know how to sort them by median? See ?reorder.factor Note that traditional practice with bwplot() is to have the categorical variable on the y-axis, in which case the default

Re: [R] xyplot() with segments() superposed?

2007-08-13 Thread Deepayan Sarkar
. part of the code came from a solution given by Deepayan Sarkar. --- library(lattice) set.seed(12345) x - 0:20 y.male.obs - - 1.2 * x + 22 + rnorm(length(x), sd = 3) y.male.prd - - 1.2 * x + 22 y.fema.obs - - 2.2 * x + 30 + rnorm(length(x), sd = 2) y.fema.prd - - 2.2 * x

Re: [R] xyplot() with segments() superposed?

2007-08-13 Thread Deepayan Sarkar
On 8/13/07, Yuelin Li [EMAIL PROTECTED] wrote: Thanks for the quick response. The general use is like the following. Suppose I have another variable, tkmark, which for cohort 1970 is coded 1.0 at x = c(7, 19) and 0 otherwise. For cohort 1980, tkmark is coded 1.0 at x = c(2, 11, 12, 19) and 0

Re: [R] 'From' and 'to' arguments in panel.abline

2007-08-13 Thread Deepayan Sarkar
On 8/13/07, Sébastien [EMAIL PROTECTED] wrote: Dear R-users, The help does not give much details on the use of the arguments 'from' and 'to' in the panel.abline function. Not surprising, since panel.abline doesn't actually have arguments called 'from' and 'to'. I have looked in the archives

Re: [R] Question regarding QT device

2007-08-05 Thread deepayan . sarkar
On 8/5/07, Saptarshi Guha [EMAIL PROTECTED] wrote: Hi, After a few modifications in the makefiles, I successfully compiled the Qt device (written by Deepayan Sirkar) for OS X 10.4.9 on a Powerbook. Cool, can you send me the modifications? I haven't managed to compile qtutils on OS X yet

Re: [R] using loops to create multiple images

2007-08-05 Thread Deepayan Sarkar
On 8/4/07, Donatas G. [EMAIL PROTECTED] wrote: I have a data.frame with ~100 columns and I need a barplot for each column produced and saved in some directory. I am not sure it is possible - so please help me. this is my loop that does not work... vars - list (substitute (G01_01),

Re: [R] Background color of symbols in xyplot

2007-08-03 Thread deepayan . sarkar
On 8/2/07, Sébastien [EMAIL PROTECTED] wrote: Dear R-users, I am using plot symbols given by pch=21:25 in a xyplot. The background color of these symbols can be defined by 'fill' in the panel argument, however I have a hard time to find how to define the same background color in the key. I

Re: [R] Xyplot - adding model lines to plotted points

2007-08-02 Thread Deepayan Sarkar
On 8/2/07, Sandeman, L. R. [EMAIL PROTECTED] wrote: Hello, I have written code to plot an xyplot as follows: library(lattice) xyplot(len~ageJan1|as.factor(cohort),groups=sex,as.table=T,strip=strip.c ustom(bg='white',fg='white'),data=dat, xlab=Age (January 1st),ylab=Length (cm),main=Linear

Re: [R] warning messages in grid or lattice give that I can't debug

2007-08-02 Thread Deepayan Sarkar
On 8/2/07, Richard M. Heiberger [EMAIL PROTECTED] wrote: The messages are visible in 2.6.0dev The same commands in 2.4.1 work without warning messages. I am using the HH_1.18-1 from R_2.4.1 with both R versions and not the current HH_2.1-3 version$version.string

Re: [R] warning messages in grid or lattice give that I can't debug

2007-08-02 Thread deepayan . sarkar
On 8/2/07, Richard M. Heiberger [EMAIL PROTECTED] wrote: Thanks Deepayan. Does that translate that I don't have to do anything else, and that I can submit the package in its present state to CRAN? No, you have to make sure that 'fill' is not a factor. My guess is that the simplest way to do

Re: [R] lattice grayscale theme

2007-08-01 Thread Deepayan Sarkar
On 7/30/07, Patrick Drechsler [EMAIL PROTECTED] wrote: Deepayan Sarkar [EMAIL PROTECTED] writes: On 7/30/07, Patrick Drechsler [EMAIL PROTECTED] wrote: The Gmane interface seems to have some lag at the moment... Deepayan Sarkar [EMAIL PROTECTED] writes: On 7/28/07, Patrick Drechsler

Re: [R] add custom strip to lattice plot

2007-08-01 Thread Deepayan Sarkar
On 7/30/07, Patrick Drechsler [EMAIL PROTECTED] wrote: Hi, what is the recommended way of adding a strip to a lattice plot? See ?strip.default. In the example below I would like to add the value of mean(y) to a new strip.: --8---cut here---start-8---

Re: [R] Splom custom superpanels

2007-08-01 Thread Deepayan Sarkar
On 8/1/07, Jonathan Williams [EMAIL PROTECTED] wrote: I thought one nice addition to a splom figure would be to have the scatterplots in the upper triangle and a color-coordinated correlation matrix on the bottom. So I tried my hand at customizing panel.pairs(), and was rebuffed. Many times.

Re: [R] line widths of plotting symbols in the lattice

2007-07-31 Thread Deepayan Sarkar
On 7/31/07, Uwe Ligges [EMAIL PROTECTED] wrote: Stephen Tucker wrote: Dear List, Sorry, this is very simple but I can't seem to find any information regarding line widths of plotting symbols in the lattice package. For instance, in traditional graphics: plot(1:10,lwd=3)

Re: [R] Overlaying a single contour from a new data array in levelplot

2007-07-30 Thread Deepayan Sarkar
On 7/30/07, Jenny Barnes [EMAIL PROTECTED] wrote: Dear Deepayan Thank you for your response - it has proved very very helpful, I can't thank you enough! I have another question for you if you have time to reply. I know you have been asked about the colour of the polygon outline before

Re: [R] lattice grayscale theme

2007-07-30 Thread Deepayan Sarkar
On 7/28/07, Patrick Drechsler [EMAIL PROTECTED] wrote: Hi, is there a grayscale setting for lattice plots? I like the default color settings. I also like the settings that are available for setting black and white with something like this: --8---cut

Re: [R] lattice grayscale theme

2007-07-30 Thread Deepayan Sarkar
On 7/30/07, Patrick Drechsler [EMAIL PROTECTED] wrote: The Gmane interface seems to have some lag at the moment... Deepayan Sarkar [EMAIL PROTECTED] writes: On 7/28/07, Patrick Drechsler [EMAIL PROTECTED] wrote: is there a grayscale setting for lattice plots? I like the default color

Re: [R] duplicate DATE at in lattice scale handled differently from base graphics OR lattice numeric scales

2007-07-30 Thread Deepayan Sarkar
On 7/30/07, Alex Brown [EMAIL PROTECTED] wrote: When at, label chains contain duplicate at values, axis ticks are dropped. I believe this is handled incorrectly for Date ats in lattice 0.15-4 when compared to how it is handled for numeric, or for dates in base plot. This can result in

Re: [R] How to auto-scale cex of y-axis labels in lattice dotplot?

2007-07-26 Thread Deepayan Sarkar
On 7/25/07, Kevin Wright [EMAIL PROTECTED] wrote: When I create a dotplot in lattice, I frequently observe overplotting of the labels along the vertical axis. On my screen, this illustrates overplotting of the letters: windows() reps=6 dat=data.frame(let=rep(letters,each=reps),

Re: [R] Overlaying a single contour from a new data array in levelplot

2007-07-24 Thread Deepayan Sarkar
On 7/24/07, Jenny Barnes [EMAIL PROTECTED] wrote: Dear R-Help community, I am trying to overlay a single contour line over a correlation plot using levelplot in the lattice package. These are the two arrays: 1) a correlation plot over Africa - so each grid square is a different colour

Re: [R] lattice plot axis scaling

2007-07-18 Thread Deepayan Sarkar
On 7/18/07, Alan S Barnett [EMAIL PROTECTED] wrote: I want to generate a lattice plot of a multiple linear regression. I'm using the code: xyplot(y ~ x1 + x2 | status, data=datam, xlab=Peak separation,ylab=G/W,main=G/W vs Fuzzy peak separation: Threshold=1.8,

Re: [R] creating a world map of eco-climatic zones

2007-07-18 Thread Deepayan Sarkar
On 7/18/07, Tanja Srebotnjak [EMAIL PROTECTED] wrote: Hello R users: I would like to produce a world map with countries colored according to whether they fall into one of 7 eco-climatic zones. For simplicity, each country is allocated to exactly 1 eco-climatic zone. For this purpose I have

Re: [R] xyplot for longitudinal data

2007-07-17 Thread Deepayan Sarkar
On 7/17/07, Osman Al-Radi [EMAIL PROTECTED] wrote: Dear R-help subscribers, I use xyplot to plot longitudinal data as follows: score-runif(100,-4,5) group-sample(1:4,100,rep=T) subject-rep(1:25,4) age-rep(runif(4,1,40),25) df-data.frame(score,group,age,subject) xyplot(score~age|group,

Re: [R] Restructuring data

2007-07-15 Thread deepayan . sarkar
On 7/15/07, Daniel Malter [EMAIL PROTECTED] wrote: Hi folks, I am new to the list and relatively new to R. I am trying to unstack data arraywise and could not find a convenient solution yet. I tried to find a solution for the problem on help archives. I also tried to use the reshape command

Re: [R] change default alphabetic order for bwplot

2007-07-14 Thread deepayan . sarkar
On 7/13/07, gallon li [EMAIL PROTECTED] wrote: when producing boxplot from bwplot, I have five groups: Nitrogen, Duration, Pressure, A, Z. I wish the graphical display is according to the original order. But the R-function bwplot seems to automatically adjust the groups according to the

Re: [R] Drawing rectangles in multiple panels

2007-07-14 Thread Deepayan Sarkar
at a time. -Deepayan --- Deepayan Sarkar [EMAIL PROTECTED] wrote: On 7/11/07, hadley wickham [EMAIL PROTECTED] wrote: A question/comment: I have usually found that the subscripts argument is what I need when passing *external* information into the panel function, for example

Re: [R] Direction of panel plots in trellis graphics

2007-07-13 Thread deepayan . sarkar
On 7/13/07, Richard M. Heiberger [EMAIL PROTECTED] wrote: You can control the panel sequence with subscripting and transpose. Here are several examples. I think tmp.tr3 is the one you asked for. library(lattice) tmp - data.frame(x=rnorm(24), y=rnorm(24), a=rep(letters[1:6],4),

Re: [R] Subplot.

2007-07-13 Thread Deepayan Sarkar
On 7/13/07, suman Duvvuru [EMAIL PROTECTED] wrote: Hello All, I wanted to do many plots (in my case, wanted to get 6 histograms) on the same figure. Is there a method in R that analogous to 'subplot' in MATLAB? Here are a few possibilities: data(singer, package = lattice) ## using

Re: [R] Drawing rectangles in multiple panels

2007-07-11 Thread deepayan . sarkar
On 7/11/07, Jonathan Williams [EMAIL PROTECTED] wrote: Hi folks, I'm having some trouble understanding the intricacies of panel functions. I wish to create three side-by-side graphs, each with different data-- so far, so good: I rbind() the data, add a column of subscripts as a conditioning

Re: [R] Drawing rectangles in multiple panels

2007-07-11 Thread deepayan . sarkar
On 7/11/07, Bert Gunter [EMAIL PROTECTED] wrote: Deepayan et. al.: A question/comment: I have usually found that the subscripts argument is what I need when passing *external* information into the panel function, for example, when I wish to add results from a fit done external to the trellis

Re: [R] Drawing rectangles in multiple panels

2007-07-11 Thread deepayan . sarkar
On 7/11/07, Jonathan Williams [EMAIL PROTECTED] wrote: Deepayan, Thanks for the clarification. The rectangles are completely external to the panel data, and correspond to 90% confidence intervals built from training data, to be overlaid on these graphs of the test data. Right. So if you

Re: [R] Drawing rectangles in multiple panels

2007-07-11 Thread Deepayan Sarkar
On 7/11/07, hadley wickham [EMAIL PROTECTED] wrote: A question/comment: I have usually found that the subscripts argument is what I need when passing *external* information into the panel function, for example, when I wish to add results from a fit done external to the trellis call.

Re: [R] Drawing rectangles in multiple panels

2007-07-11 Thread Deepayan Sarkar
On 7/11/07, Stephen Tucker [EMAIL PROTECTED] wrote: In the Trellis approach, another way (I like) to deal with multiple pieces of external data sources is to 'attach' them to panel functions through lexical closures. For instance... rectInfo - list(matrix(runif(4), 2, 2),

Re: [R] Lattice: vertical barchart

2007-07-10 Thread Deepayan Sarkar
On 7/10/07, Sundar Dorai-Raj [EMAIL PROTECTED] wrote: Michael Hoffman said the following on 7/10/2007 7:06 AM: barchart(Titanic, stack=F) produces a very nice horizontal barchart. Each panel has four groups of two bars. barchart(Titanic, stack=F, horizontal=F) doesn't produce the

Re: [R] Formatting panel borders in lattice package

2007-07-10 Thread Deepayan Sarkar
On 7/10/07, Hil Lyons [EMAIL PROTECTED] wrote: Hello all -- I would like to thicken the borders between panels -- or more generally, all borders -- in a plot generated using lattice (specifically, levelplot). Something similar perhaps to box() function in graphics. I haven't been successful

Re: [R] Antwort: Re: pgup/pgdown in R Graphics Window under Linux ['Watchdog': checked]

2007-07-09 Thread Deepayan Sarkar
On 7/8/07, Paul Matthias Diderichsen [EMAIL PROTECTED] wrote: Hi Deepayan, Deepayan Sarkar [EMAIL PROTECTED] schrieb am 06.07.2007 02:05:02: On 7/5/07, Paul Matthias Diderichsen [EMAIL PROTECTED] wrote: library(lattice) xyplot(speed~dist|speed, data=cars, layout=c(3,3

Re: [R] Several quick questions

2007-07-08 Thread deepayan . sarkar
On 7/7/07, Sébastien [EMAIL PROTECTED] wrote: Dear R users, Here is a couple a quick questions, for which I was unable to not find any answer in the list archives and in the help: [...] 2- When a log scale is called in a graph, the label takes a format like 10^n. That's true for lattice,

Re: [R] algebra/moving average question - NOTHING TO DO WITH R

2007-07-06 Thread Deepayan Sarkar
On 7/6/07, Leeds, Mark (IED) [EMAIL PROTECTED] wrote: This has ABSOLUTELY nothing to do with R but I was hoping that someone might know because there are obviously a lot of very bright people on this list. Suppose I had a time series of data and at each point in time t, I was calculating x

Re: [R] Changing Tick Mark Values for lattice / wireframe

2007-07-06 Thread Deepayan Sarkar
On 7/6/07, Anthony Pezzola [EMAIL PROTECTED] wrote: How can I change the tick mark values in lattice, specifically wireframe? I have a 11*46 matrix of values that I am plotting using wireframe. Unfortunely, the values range from 0.1-1.1 and 0.5-5. Using the code below the tick marks have are

Re: [R] Lookups in R

2007-07-05 Thread deepayan . sarkar
On 7/5/07, jim holtman [EMAIL PROTECTED] wrote: You are getting two very different results in what you are comparing. system.time(lapply(1:10^4, mean)) user system elapsed 1.310.001.31 is returning a list with 10,000 values in it. It is taking time to allocate the space and

Re: [R] Adding points to a wireframe with conditioning variable

2007-07-05 Thread Deepayan Sarkar
On 7/5/07, Mark Lyman [EMAIL PROTECTED] wrote: I would like to add points to a wireframe but with a conditioning variable. I found a solution for this without a conditioning variable here, http://finzi.psych.upenn.edu/R/Rhelp02a/archive/65321.html. Does anyone know how to plot a wireframe

Re: [R] pgup/pgdown in R Graphics Window under Linux

2007-07-05 Thread Deepayan Sarkar
On 7/5/07, Paul Matthias Diderichsen [EMAIL PROTECTED] wrote: Dear S-users. This should be an easy one: How do I change pages on an X11 graphics device under linux? I thought that the page-up/page-down keys were supposed to do the trick, but the frame (window) seems to be kind of immune to

Re: [R] retrieving stats from bwplot

2007-07-04 Thread deepayan . sarkar
On 7/3/07, Héctor Villalobos [EMAIL PROTECTED] wrote: Hi all, I want to retrieve the stats from a 'bwplot' with one factor. I have read the help for 'panel' function and I'm aware of the option 'stats' which defaults to 'boxplot.stats' but I didn't understand it well and therefore I am

Re: [R] Lookups in R

2007-07-04 Thread deepayan . sarkar
On 7/4/07, Martin Morgan [EMAIL PROTECTED] wrote: Michael, A hash provides constant-time access, though the resulting perl-esque data structures (a hash of lists, e.g.) are not convenient for other manipulations n_accts - 10^3 n_trans - 10^4 t - list() t$amt - runif(n_trans) t$acct

Re: [R] Lattice: shifting strips to left of axes

2007-07-03 Thread deepayan . sarkar
On 7/3/07, Michael Hoffman [EMAIL PROTECTED] wrote: [EMAIL PROTECTED] wrote: On 7/2/07, Michael Hoffman [EMAIL PROTECTED] wrote: Consider this plot: xyplot(mpg ~ disp | cyl, mtcars, strip=F, strip.left=T, layout=c(1, 3), scales=list(relation=free),

Re: [R] Plots from categorial data

2007-07-01 Thread deepayan . sarkar
On 7/1/07, Jim Lemon [EMAIL PROTECTED] wrote: Christoph Krammer wrote: Hello everybody, Since my first message was caught by the spam filter, I just try to do it again: I want to use R to generate plots from categorial data. The data contains results from OCR scans over images with

Re: [R] Adding different output to different lattice panels

2007-06-28 Thread deepayan . sarkar
On 6/28/07, [EMAIL PROTECTED] [EMAIL PROTECTED] wrote: I would like to add a reference line to lattice graphs, with the reference line being different according to the factor level. Example : Draw 3 dotplots for a,b and c factors, and then add an horizontal line at y=10 for panel a, y=8 for

Re: [R] Adding different output to different lattice panels

2007-06-28 Thread Deepayan Sarkar
On 6/28/07, Alexandre Salvador [EMAIL PROTECTED] wrote: Selon [EMAIL PROTECTED]: On 6/28/07, [EMAIL PROTECTED] [EMAIL PROTECTED] wrote: I would like to add a reference line to lattice graphs, with the reference line being different according to the factor level. Example : Draw 3

Re: [R] Changing graphics height when using grid and lattice

2007-06-28 Thread Deepayan Sarkar
On 6/28/07, Jim Price [EMAIL PROTECTED] wrote: Hi, I have recently been playing with the grid package in an attempt to create some pages containing multiple lattice plots on the same page. However, when I specify a grid layout with different widths, such as: pushViewport(viewport(layout =

Re: [R] xyplot with par

2007-06-27 Thread deepayan . sarkar
On 6/27/07, Afshartous, David [EMAIL PROTECTED] wrote: All, Is there are a simple way to plot multiple xyplots on the same page in the code below (it currently overwrites the first plot w/ the second). I searched the archives and saw a similar question but the answer didn't seem to work.

Re: [R] levelplot in lattice

2007-06-27 Thread Deepayan Sarkar
On 6/27/07, [EMAIL PROTECTED] [EMAIL PROTECTED] wrote: Hi, I'm new to lattice. So please kindly be patient with me. I'm trying to arrange groups of levelplots into 3 rows as follows: Row1: Probabilities as functions of x and y, and conditioned on an event factor vector factor(a,b,c)

Re: [R] Sweave bug? when writing figures / deleting variable in chunk

2007-06-27 Thread Deepayan Sarkar
On 6/27/07, D G Rossiter [EMAIL PROTECTED] wrote: I have found a quite strange (to me) behaviour in Sweave. It only occurs in the following situation: 1. define a variable in one chunk 2. use it within a subsequent figure-generating chunk 3. delete it at the end of that same chunk Then the

Re: [R] levelplot in lattice

2007-06-27 Thread deepayan . sarkar
On 6/27/07, [EMAIL PROTECTED] [EMAIL PROTECTED] wrote: Sorry. My email editor from my ISP always screws up the text after sending out. Below is my response to you (in plain text). Thank you Deepayan. Let's do the following exercise to reproduce the problem I'm facing. In the following code, I

Re: [R] Overlaying lattice graphs (continued)

2007-06-22 Thread Deepayan Sarkar
On 6/22/07, Sébastien [EMAIL PROTECTED] wrote: Hi Deepayan, The following code creates a dummy dataset which has the same similar as my usual datasets. I did not try to implement the changes proposed by Hadley, hoping that a solution can be found using the original dataset. # My

Re: [R] Lattice: hiding only some strips

2007-06-22 Thread Deepayan Sarkar
On 6/22/07, Michael Hoffman [EMAIL PROTECTED] wrote: I am using R 2.4.0 and lattice to produce some xyplots conditioned on a factor and a shingle. The shingle merely chops up the data along the x-axis, so it is easy to identify which part of the shingle a panel is in by looking at the x-axis

Re: [R] Barchart legend position

2007-06-22 Thread Deepayan Sarkar
On 6/22/07, Spilak,Jacqueline [Edm] [EMAIL PROTECTED] wrote: I am using barchart to make charts for some data with a lot more functions and labels and such in the command. barchart(Freq ~ factor(HH), data = dataset1, group= year) So I have my data grouped by year and I get a legend at the

Re: [R] Lattice: hiding only some strips

2007-06-22 Thread deepayan . sarkar
On 6/22/07, Michael Hoffman [EMAIL PROTECTED] wrote: Deepayan Sarkar wrote: On 6/22/07, Michael Hoffman [EMAIL PROTECTED] wrote: I am using R 2.4.0 and lattice to produce some xyplots conditioned on a factor and a shingle. The shingle merely chops up the data along the x-axis, so

Re: [R] Overlaying lattice graphs (continued)

2007-06-21 Thread Deepayan Sarkar
On 6/21/07, Sébastien [EMAIL PROTECTED] wrote: Hi Hadley, Hopefully, my dataset won't be too hard to changed. Can I modify the aspect of each group using your code (symbols for observed and lines for predicted)? Sebastien hadley wickham a écrit : Hi Sebastian, I think you need to

Re: [R] barchart in trellis and NA

2007-06-21 Thread Deepayan Sarkar
On 6/21/07, Sigbert Klinke [EMAIL PROTECTED] wrote: Hi, I've a dataset with discrete data and several groups and in one group I have also missing values (NA). When I use table and barchart to visualize the counts I never get a bar for NA in the barchart although it appears in the result of

Re: [R] Retrieve part of (top right corner) of a plot.data.frame plot?

2007-06-20 Thread Deepayan Sarkar
On 6/20/07, Dan Bolser [EMAIL PROTECTED] wrote: Hi, I believe this question has been asked before, but I cant find and don't remember the answer. The problem is simple, calling 'plot.data.frame(x)' gives a nice 'matrix of scatterplots' for each pair of columns in x. for example; x -

Re: [R] Controlling text and strip arrangement in xyplot

2007-06-19 Thread Deepayan Sarkar
On 6/19/07, Juan Pablo Lewinger [EMAIL PROTECTED] wrote: I've searched the archives and read the xyplot help but can't figure out the 2 lattice questions below? Consider: library(lattice) DF - data.frame(x=rnorm(20), y=rnorm(20), g1=rep(letters[1:2], 10),

Re: [R] Histograms with strings, grouped by repeat count (w/ data)

2007-06-19 Thread Deepayan Sarkar
On 6/18/07, Matthew Trunnell [EMAIL PROTECTED] wrote: Aha! So to expand that from the original expression, table(table(d$filename, d$email_addr)) 0 1 2 3 253 20 8 9 I think that is exactly what I'm looking for. I knew it must be simple!!! What does the 0 column represent?

Re: [R] plotting order of lines in xyplot panels while using conditioning variable and groups

2007-06-19 Thread Deepayan Sarkar
On 6/19/07, RICHARD PITMAN [EMAIL PROTECTED] wrote: I am using the following code: library(lattice) data-read.csv(data.csv) attach(data) fig-xyplot(S_t~month|event, key= list(text=list(lab=c(Time to first CV event - Data, Survival post

Re: [R] Second y-axis in xyplot (lattice) where y1 and y2 have different ranges

2007-06-18 Thread Deepayan Sarkar
On 6/18/07, Andy Bunn [EMAIL PROTECTED] wrote: Hi all, I realize this is asking a lot of lattice, but I want to add a second y axis inside a xyplot and have y1 and y2 have different ranges. Given dat below, I can add a second y axis by overlaying a new plot with par(new=T) and label axis 4

Re: [R] [OT] 'gv' and fractional points

2007-06-15 Thread Deepayan Sarkar
On 6/15/07, Ted Harding [EMAIL PROTECTED] wrote: Hi Folks, This is off-topic R-wise, but it may be close to the heart of many R-users, so I think it may be the best place to ask! Users of 'gv' (the front end to ghostscript) will be aware of the little window which gives you the x-y

Re: [R] model.frame: how does one use it?

2007-06-15 Thread Deepayan Sarkar
On 6/15/07, Dirk Eddelbuettel [EMAIL PROTECTED] wrote: Philipp Benner reported a Debian bug report against r-cran-rpart aka rpart. In short, the issue has to do with how rpart evaluates a formula and supporting arguments, in particular 'weights'. A simple contrived example is

Re: [R] model.frame: how does one use it?

2007-06-15 Thread Deepayan Sarkar
On 6/15/07, hadley wickham [EMAIL PROTECTED] wrote: On 6/15/07, Deepayan Sarkar [EMAIL PROTECTED] wrote: [...] By 'name', I mean a symbol, such as 'Age' or 'myweight'. So basically, everything is as you would expect if the name is visible in data, but if not, the search starts

Re: [R] model.frame: how does one use it?

2007-06-15 Thread Deepayan Sarkar
On 6/15/07, Philipp Benner [EMAIL PROTECTED] wrote: Thanks for your explanation! With this in mind, either of the following might do what you want: badFunction - function(mydata, myformula) { mydata$myweight - abs(rnorm(nrow(mydata))) hyp - rpart(myformula,

Re: [R] plot via xyplot not being saved

2007-06-15 Thread deepayan . sarkar
On 6/15/07, Benilton Carvalho [EMAIL PROTECTED] wrote: Hi everyone, it's been a while I've been trying to save a plot created via lattice:::xyplot if I have a file tst.R with the following code: y - rnorm(100) x - rnorm(100) z - sample(letters[1:4], 100, rep=T) library(lattice)

Re: [R] plot via xyplot not being saved

2007-06-15 Thread deepayan . sarkar
On 6/15/07, Benilton Carvalho [EMAIL PROTECTED] wrote: So, if those statements are inside a function, I have to make my function to have an 'echo' argument/functionality? eg.: ## begin test.R test - function(n){ y - rnorm(n) x - rnorm(n) z - sample(letters[1:4], n, rep=T)

Re: [R] Annotating trellis graphics

2007-06-14 Thread Deepayan Sarkar
On 6/13/07, Alan S Barnett [EMAIL PROTECTED] wrote: I'm using xyplot to generate a trellis plot with each panel containing a scatterplot and a best fit line. Is it possible to write the slope of the best fit line in each panel? Sure. The only question is, where (inside the panel) do you want

Re: [R] format.dates, chron and Hmisc

2007-06-12 Thread Deepayan Sarkar
On 6/10/07, R.H. Koning [EMAIL PROTECTED] wrote: Hello, I have some problems in using chron, Hmisc, and lattice. First, using both chron and Hmisc, I get an error message when describing data: df$Date - chron(df$Date,format=c(d/m/y)) ll - latex(describe(df),file=..//text//df.tex) Error in

Re: [R] Stacked barchart color

2007-06-12 Thread Deepayan Sarkar
On 6/12/07, Dieter Menne [EMAIL PROTECTED] wrote: Dear Latticer, I want to give individual colors to all elements in a simple stacked barchart. I know why the example below does not work (and it is a excellent default), but is there any workaround for this? Dieter # This only colors red

Re: [R] 2 Trellis graphics question

2007-06-12 Thread Deepayan Sarkar
On 6/12/07, Alan S Barnett [EMAIL PROTECTED] wrote: 1) I have a data that includes some bad data. I want to make a trellis plot where each panel contains a) A scatter plot of the good data b) A scatter plot of the bad data in a different color c) A best fit line of all the data, and d) A

Re: [R] Lines in dotchart dotplot ?

2007-06-11 Thread Deepayan Sarkar
On 6/11/07, John Kane [EMAIL PROTECTED] wrote: --- [EMAIL PROTECTED] wrote: On 6/9/07, John Kane [EMAIL PROTECTED] wrote: Is it possible to use dotchart or dotplot and set the lines in such a way that they only extend from the left y-axis to the data point? Yes (sort of) in

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