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results if you ignore response bias, and
if the conditions differ in response bias.
The suggestion I made based on the idea of inter-rater agreement
implies a rough-and-ready model similar to the first. It does
take response bias into account.
Jon
--
Jonathan Baron, Professor of Psychology
learned from this is that backup systems do no good unless
you have a computer to use. And also I could have backed up in a
way that made it easier for myself to reconstruct, but that was
not the major source of the delay.
Jon
--
Jonathan Baron, Professor of Psychology, University of Pennsylvania
=functions)
then you will find several ways to compute kappa (assuming that
it is the same kappa we're talking about).
The first one I looked at (kappa2 in irr) yields a p value.
I'm not sure that this is what you are asking, though.
Jon
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Jonathan Baron, Professor of Psychology, University
for it just
now.
Jon
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,]
install.packages(setdiff(cp,ip))
But now it looks like you can do this:
install.packages(new.packages())
Jon
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. It is a bit
obscure. It is rcorr.cens in the Hmisc package.
The significance test is the same as for Kendall's tau, according
to some books. I don't know about standard error.
Jon
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Try
R CMD INSTALL -l lib pkgs
The help file is in the utils package. I'm sure this is
documented in the manual too.
Jon
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it's not on the extension
The list is updated monthly, and rpanel is new.
Jon
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I need to re-draw a graph that consists of a few lines. Next to
each line is a curly bracket - like { - with its ends near the
ends of the line. (At the point of the bracket is some sort of
label, but that is done with text() or something like that.)
Some brackets are horizontal, some are
., then he has the option of using my search
engine as a fallback, where it is likely that someone else has
used his favored terms.
Jon
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is less than my very modest
collection of digital photos, and a tiny fraction of a 3-year-old
standard hard disk. In other words, it is no big deal to install
all the packages if you have your own computer.
Jon
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The RPM for Fedora Core 2 seems to work just fine on Core 3.
(The graphics window got smaller, but I'm sure there is a setting
for that.)
Jon
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Home page: http://www.sas.upenn.edu/~baron
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On 11/09/04 20:37, Jari Oksanen wrote:
On 9 Nov 2004, at 19:44, Jonathan Baron wrote:
The RPM for Fedora Core 2 seems to work just fine on Core 3.
(The graphics window got smaller, but I'm sure there is a setting
for that.)
That would be good news. I really don't know how the graphics
be difficult.
BUT, it might help to install just the help pages for all
packages, without the packages themselves. Then help.search()
would find things. (I have no interest in figuring out how to do
this, but maybe someone else does.)
Jon
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Jonathan Baron, Professor of Psychology, University
write
yourself. Thus, SAS may be faster for huge data sets, like
census data.
Jon
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)
would change its mean.
Jon
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be on the
slope rather than the intercept or mean.)
Jon
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PLEASE do
On 11/30/04 13:21, Frank E Harrell Jr wrote:
Jonathan Baron wrote:
I would like to impute missing data in a set of correlated
variables (columns of a matrix). It looks like transcan() from
Hmisc is roughly what I want. It says, transcan automatically
transforms continuous and categorical
to psychology-English and both to
statistics-English.
Jon
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the others, without the dependent variable.
Jon
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On 12/02/04 21:15, Anne wrote:
What about starting a database?
Of what? Like the one in the last line of my .sig?
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Fedora uses yum as well as rpm. I haven't installed an RPM in
months, except for R. Yum is great.
Jon
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()
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PLEASE do read
There were two earlier threads on this topic:
http://finzi.psych.upenn.edu/R/Rhelp02a/archive/17554.html
http://finzi.psych.upenn.edu/R/Rhelp02a/archive/10706.html
Jon
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R search
==) res -
paste(idxname=Rhelp02aidxname=Rhelp01idxname=Rhelp00,
idxname=functionsidxname=docs,sep=)
res - sub(^+,,res)
qstring - paste(string, mpp, format, sortby, res, sep=)
browseURL(qstring)
invisible(qstring)
}
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Jonathan Baron, Professor
these to your reminder
announcement.]
Jon
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Documentation coming soon.
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# Written by Andy Liaw and modified by Jonathan Baron 12/24/2004.
RSiteSearch - function(string,
restrict=c(Rhelp02a,Rhelp01,functions,docs),
format=normal, sortby=score, matchesPerPage=20) {
string - paste(http
Harington
I need a function that would declare those strings as a match (ideally
having an
argument that would allow introducing 80% instead of 90%)
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also be queried for automatic package
installation.
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engine for it. It is
HUGE, not exactly for perusal.
Jon
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the usefulness of CSS, so
maybe it is better to leave things as they are for now.
Jon
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Editor: Judgment and Decision Making (http://journal.sjdm.org
April 2006 at 13:18, Jonathan Baron wrote:
| The only thing I might change is to replace the frames with some
| sort of CSS-based positioning.
Yes please!
Dirk
--
Hell, there are no rules here - we're trying to accomplish something
list, so clearly some
people understand it. (Not me.) I'm posting here in case
someone has a suggestion about what to do about it, for users, as
opposed to developers. Apparently R-2.3-patched did not fix it,
but probably that will change at some point.
Jon
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Jonathan Baron, Professor
On 04/27/06 22:06, Prof Brian Ripley wrote:
On Thu, 27 Apr 2006, Jonathan Baron wrote:
I get this error on one computer running Fedora Core 5 but not on
another one, when I start R from Xemacs using ESS. After I get
the error with Xemacs, I get it even without using Xemacs. I
haven't
the package, not just download it.
Then you need to load it into your R session:
library(foreign)
Did you do that?
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well.
Jon
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On 05/31/06 09:39, Pramod Anugu wrote:
5. Typed make install
6. Typed R
Fatal error: unable to open the base package
I get the error message. Please advice
Other things to try (aside from make check):
1. Make sure you are root before you say make install.
2. Check to see that the
might be conservative,
but I have not thought this through.
It is rare to see anyone report a test for alpha because it is
usually used descriptively. If it isn't .7 or higher, people get
upset, yet even .5 would be wildly significant in most cases.
Jon
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have other
alternative built-in search capabilities, but I haven't tried
them. Beagle is the new Linux search tool, but I don't know what
it does.
Jon
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Jonathan Baron, Professor of Psychology, University of Pennsylvania
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Editor: Judgment and Decision
]:
As this is time critical I would like to slightly abuse the list by asking
whether anyone knows how to extract from MS Word into a stand-alone
graphics file a plot that was pasted into Word from R (probably as a
Windows Metafile, but possibly as a bitmap).
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- X[M$x]
M$y - Y[M$y]
M$z - Z[M$z]
Finally,select two subsets:
1. if x='a';
2.x='a' and y='a';
M[M$x==a,]
M[M$x==a M$y==a,]
The subsets will be rows. I'm not sure that's what you mean.
Jon
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.
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problem, so far as I can tell.
I think you need to do some reading of the R documentation. What
are A, B, and C? They should be vectors. That was the point of
my comment about rowMeans.
You seem to be guessing and relying on authority instead of
trying to understand.
--
Jonathan Baron
In addition, the search page at
http://finzi.psych.upenn.edu
can search all functions of all CRAN packages.
This is also available through
RSiteSearch(string,restrict=functions).
See the help page for RSiteSearch.
Jon
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Jonathan Baron, Professor of Psychology, University of Pennsylvania
Because of electrical work in the building, finzi.psych.upenn.edu
will be down from early Sunday morning (Eastern Daylight Time,
U.S.) to mid-morning Monday (assuming all goes well). This means
that RSiteSearch() will not work. Sorry about this. Jon
plot(x,y)
abline(lm(y~x))
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of everything), and
I'm having some, but slowly solving them (and filing bug
reports).
Jon
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of cluster or classifcation
analysis on your subjects, to see if they really fall into
distinct groups with very different opinions.
I have used R for many of the things I just listed (but not all),
so I might be able to provide examples.
Jon
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Jonathan Baron, Professor of Psychology
, and run it again. This is a
good way to work with R anyway.
If, for some reason, the graphics tools available for R are not
sufficient - and I find this hard to imagine - you can also save
graphics as xfig files and then edit them with xfig, assuming
that you are using Unix/Linux.
Jon
--
Jonathan
there is a single
file that matters to the RPM.
Jon
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,] - Daughter[i,]-Mother[Mother$Code==Daughter[i,Code]}
Jon
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On 05/28/04 12:21, Martin Klaffenboeck wrote:
Am 27.05.2004 22:43:02 schrieb(en) Jonathan Baron:
On 05/27/04 21:58, Martin Klaffenboeck wrote:
Hello,
Im reading through some manuals, but I cannot find my answer.
I have a file containing many data:
Vpn CodeFamily Age F1 F2
.
Jon
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, but I fear
the opposite is intended.
Jon
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it.
Jon
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to do this on each row and then convert the NAs to
0s. So first create an empty data frame, the same size as your
original one X, like my Y. Callit Y. Then a loop? (I can't
think of a better way just now, like with mapply.)
for (i in [whatever]) Y[i][X[i]] - 1
(Not tested.) Jon
--
Jonathan
On 06/07/04 22:45, Jonathan Baron should have written:
for (i in [whatever]) Y[i,][X[i,]] - 1
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from my R search page - look under
inter-rater agreement).
Jon
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Does anyone know how to read a SYSTAT .syd file on Linux?
(Splus 6 does it, but it is easier to find a Windows box
with Systat than to download their demo. I'm wondering
if there is a better way than either of these options.)
Jon
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Jonathan Baron, Professor of Psychology, University
) {
m1[,i] - resid(lm(m1[,i] ~ m1[, 1:(i-1)]))
}
Test it with cor(m1[,-11])
I'm sure there are better ways.
Of course
m1 - matrix(rnorm(100),10,10)
is ALMOST what you want.
Jon
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the
letters normal rather than slanted. I guess I favor the slanted
version in the last line, since that seems to be the custom in my
field for $t$.
Jon
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generate the correct values for some columns and
not others.
For this question, look at scale. That is:
?scale
I don't understand the other questions.
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of the above biplot, is this
possible? (or even a good way to present the data?
No idea how to do this or why you would want it.
Jon
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with some
imperative/iterative style programming using some kind
of string generation system. This sounds like a royal
pain, and is something I'd rather avoid doing if at
all possible.
Any suggestions? :-D
-petertgaffney
Jon
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Home
point in terms of the
presence or absence of each germ and the presence or absence of
each drug. Is that it? It isn't crazy, but it is unusual.
Jon
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),]$score
ces$score - ifelse(ces$question %in% c(1,3,5),5-ces$score,ces$score)
b) why there is a different behavior from the command line and from a
script?
Could the problem be on the line before the one that gives the error?
Jon
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Jonathan Baron, Professor of Psychology, University of Pennsylvania
,
conditions, and questions. A lot of what I do involves
calculating within-subject correlations and regressions. I used
to do that entirely with loops, but lately I've found that R's
mapply() function can do some of it, as well as apply().
Jon
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is in the psy
package. It is describe a little in our Notes on R for
psychology ... (linked from the R page below), written befpre
psy was available.
Jon
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. The biplot function is especially nice.
Jon
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your table after xtable makes it than to modify
xtable to allow such things, since xtable would not save you any
typing time. You could stick in your long headers using
\multicolumn{1}{p(2cm)}{blah blah blah}, or \parbox{}, or just
use two rows. (I haven't tested any of this.)
Jon
--
Jonathan
a possibilty to read a SPSS file
under R1.9.1?
I cannot find spss.get in the man pages for the current version
of foreign. It works for me with read.spss.
But I'm surprised it ever worked. So, possibly, there is
something wrong with the spss file you are trying to import.
Jon
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Jonathan Baron
). Tests for comparing elements of a
82 print correlation matrix. Psychological Bulletin, 87, 245-251.
100 goto 12
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on Fedora Core 2,
and it now takes almost 10 hours to update each month on a very
fast computer (Pentium 4 2.80GHz with Serial ATA disk
controller).
Jon
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Jonathan Baron, Professor of Psychology, University of Pennsylvania
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research could benefit from more,
but smaller, grants.
Teaching R is part of this battle, since it conveys an attitude
as well as specific knowledge. I guess that is the main reason I
plan to keep trying to do it.
Jon
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Jonathan Baron, Professor of Psychology, University of Pennsylvania
Home
at help before posting here.
BTW, there is a small bug in the documentation for cor: cor.test
is no longer in the ctest package, but in stats.
Jon
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On 08/24/04 13:50, Paolo Tommasini wrote:
Hi my name is Paolo Tommasini does anyone know how to compute a mode
( most frequent element ) for a distribution ?
which.max
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R search page
with missing data depends on the assumptions you make.
As a novice, I found the following article to be helpful:
Schafer, J. L., Graham, J. W. (2002). Missing data: Our view of
the state of the art. Psychological Methods, 7, 147-177.
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Jonathan Baron, Professor of Psychology, University
many missing data, but don't take
my word for it.
Jon
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in R and quite new on statistics).
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PLEASE do read
, and it may be that the installation
documentation needs minor tweaking. (Or it may be that I did
something else wrong, but right now I doubt that.)
Jon
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/usr/include/tk.h usability... yes
I have one more left. I have no idea what is going on.
Sometimes it works. Sometimes not.
Jon
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aregImput() is good for, or
transcan(), depending on whether you need to make inferences (and
hence do multiple imputation).
Jon
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39
The commands here were
s.imp - transcan(m1,asis=*,data=m1,imputed=T,long=T,pl=F)
s.na - is.na(m1) # which ratings are imputed
m1[which(s.na)] - unlist(s.imp$imputed)
(I wish I could find a more elegant way to replace the NAs.)
Jon
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Jonathan Baron, Professor of Psychology, University
, or even whether this is a good idea.
Jon
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may say
something!)
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profiles ordinally.
Conjoint analysis then is applied on the preference data to estimate the
utility values - or the part worth for each factor level.
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guide! http://www.R-project.org/posting-guide.html
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PLEASE
, but it is in
Fedora extras. R is now part of the Fedora distribution,
albeit one of the many things they have put in extras in an
effort to limit the distribution to 4 CDs.
3. Report a bug. But where? Is it a bug in R?
4. Something else.
Jon
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Jonathan Baron, Professor of Psychology, University
On 07/02/05 15:41, Yulei He wrote:
Hi, there.
Is there any function in R to plot the probability-probability plot (PP
plot)? Suppose I am testing some data against normal.
qqnorm might be what you want, or lead to it.
--
Jonathan Baron, Professor of Psychology, University of Pennsylvania
the correlation
matrix of all the columns.
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Jonathan Baron, Professor of Psychology
to revise soon) is written for people who are
making the particular sort of transition I made.
Jon
--
Jonathan Baron, Professor of Psychology, University of Pennsylvania
Home page:http://www.sas.upenn.edu/~baron
R page: http://finzi.psych.upenn.edu
.
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Jonathan Baron, Professor of Psychology, University of Pennsylvania
Home page:http://www.sas.upenn.edu/~baron
R page: http://finzi.psych.upenn.edu/
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of each row, then take mean
[1] 0.344
mean(apply(smallmat,1,var))
[1] 0.9967427
--
Jonathan Baron, Professor of Psychology, University of Pennsylvania
Home page:http://www.sas.upenn.edu/~baron
R page: http://finzi.psych.upenn.edu
in hand.
--
Jonathan Baron, Professor of Psychology, University of Pennsylvania
Home page:http://www.sas.upenn.edu/~baron
R page: http://finzi.psych.upenn.edu/
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