Re: [R-pkg-devel] EXTERNAL: CRAN packages dependency on bioconductor packages

Hi Marcel, I appreciate your suggestion and clarification. It is worth mentioning that �rmarkdown� is included in the Import filed, and I apologize for not stating it here. Interestingly, I was able to successfully upload StepReg version 1.5.0 to CRAN with BiocStyle listed in the Suggests

Re: [R-pkg-devel] Altrep header, MSVC, and STRUCT_SUBTYPES macro

On Wed, 15 May 2024, David Cortes wrote: I'm seeing some issues using R Altrep classes when compiling a package with the MSVC compiler on windows. While CRAN doesn't build windows binaries with this compiler, some packages such as Arrow and LightGBM have had some success in building their R

Re: [R-pkg-devel] CRAN packages dependency on bioconductor packages

Hi Llu�s, Thanks for your input. I believe it is ok to use a vignette output conditionally with knitr. However, what confuses me is that I was able to successfully upload StepReg version 1.5.0 to CRAN with BiocStyle listed in the Suggests field. It seems that there is some issues with CRAN

Re: [R-pkg-devel] Altrep header, MSVC, and STRUCT_SUBTYPES macro

Sent as mistake - my apologies! Get Outlook for iOS From: R-package-devel on behalf of Merlise Clyde, Ph.D. Sent: Wednesday, May 15, 2024 7:45:46 PM To: David Cortes ; r-package-devel@r-project.org Subject: Re: [R-pkg-devel] Altrep

Re: [R-pkg-devel] Altrep header, MSVC, and STRUCT_SUBTYPES macro

Are R ALTREP objects memory mapped Get Outlook for iOS From: R-package-devel on behalf of David Cortes Sent: Wednesday, May 15, 2024 12:54:37 PM To: r-package-devel@r-project.org Subject: [R-pkg-devel] Altrep header, MSVC, and

Re: [R-pkg-devel] EXTERNAL: CRAN packages dependency on bioconductor packages

Hi Junhui, There are about 25 packages in CRAN that use BiocStyle, including yours. It seems that MetaIntegrator is also facing the same error. I have not looked too deeply into the issue but it seems that you should also include "rmarkdown" in the Suggests field. AFAIK, there is no need to

[R-pkg-devel] Interpretation of rhub check failures

Dear all, I should submit a new version of the package SchoolDataIT and before doing so I need to check it on multiple flavors. So I have started trying some checks with rhub. I have loaded the new version of the package on

[R-pkg-devel] Altrep header, MSVC, and STRUCT_SUBTYPES macro

I'm seeing some issues using R Altrep classes when compiling a package with the MSVC compiler on windows. While CRAN doesn't build windows binaries with this compiler, some packages such as Arrow and LightGBM have had some success in building their R packages with MSVC outside of CRAN, in order