Dear Simon,
As a subscriber to RootTalk I have just received the following mail:
http://root.cern.ch/root/roottalk/roottalk10/0122.html
As you see there are other Mac users of ROOT who do not want to use fink
but another gfortran compiler.
I seems that besides gfortran from your website, the
Dear Simon,
Thank you for your answer which is really helpful for me.
Best regards
Christian
Simon Urbanek wrote:
On Jan 29, 2010, at 13:49 , cstrato wrote:
Dear Simon,
As a subscriber to RootTalk I have just received the following mail:
Dear Simon,
Meanwhile I have tried to install xps:
$ R CMD INSTALL -l ~/Library/R/2.10/library xps_1.7.4.tar.gz
* installing *source* package 'xps' ...
checking for gcc... gcc-4.2 -arch i386 -std=gnu99
checking for C compiler default output file name... a.out
checking whether the C compiler
On Jan 26, 2010, at 15:24 , cstrato wrote:
Dear Simon,
Meanwhile I have tried to install xps:
$ R CMD INSTALL -l ~/Library/R/2.10/library xps_1.7.4.tar.gz
* installing *source* package 'xps' ...
checking for gcc... gcc-4.2 -arch i386 -std=gnu99
checking for C compiler default output file
On Jan 26, 2010, at 15:24 PM, cstrato wrote:
Dear Simon,
Meanwhile I have tried to install xps:
$ R CMD INSTALL -l ~/Library/R/2.10/library xps_1.7.4.tar.gz
* installing *source* package 'xps' ...
checking for gcc... gcc-4.2 -arch i386 -std=gnu99
checking for C compiler default output
Hmm, I forgot about --arch. As Simon said, you should be able to do it by
R --arch=x86_64 --no-multiarch CMD INSTALL
My guess is that you need --no-multiarch, but I cannot experiment with this
where I sit.
Kasper
On Jan 26, 2010, at 15:57 PM, Kasper Daniel Hansen wrote:
On Jan 26, 2010,
On Jan 26, 2010, at 15:57 , Kasper Daniel Hansen wrote:
On Jan 26, 2010, at 15:24 PM, cstrato wrote:
Dear Simon,
Meanwhile I have tried to install xps:
$ R CMD INSTALL -l ~/Library/R/2.10/library xps_1.7.4.tar.gz
* installing *source* package 'xps' ...
checking for gcc... gcc-4.2 -arch i386
Dear Kasper, dear Simon,
Thank you both for your help, this was easier than I thought.
Since I had already installed R-2.10.1.pkg all I needed to do was:
$ R --arch=x86_64 --no-multiarch CMD INSTALL -l ~/Library/R/2.10/library
xps_1.7.4.tar.gz
* installing *source* package 'xps' ...
checking
Dear Simon,
Thank you for your suggestions, which I have just tried. Sadly the error
remains the same.
The problem seems to be that for some reason
gfortran-4.2-5564-darwin9.tar.gz does not have a
/usr/lib/gcc/i686-apple-darwin9/4.2.1/x86_64 directory containing
libgfortranbegin.a. For
On Jan 25, 2010, at 15:03 , cstrato wrote:
Dear Simon,
Thank you for your suggestions, which I have just tried. Sadly the
error remains the same.
The problem seems to be that for some reason gfortran-4.2-5564-
darwin9.tar.gz does not have a /usr/lib/gcc/i686-apple-
darwin9/4.2.1/x86_64
Dear Simon,
Thank you, with this version I could finally compile ROOT as 64 bit.
Now I have one more question:
When I do R CMD Install xps.tar.gz which now depends on 64 bit ROOT,
do I need to install the 64 bit version of R or can I use the current R
version?
Best regards
Christian
Simon
On Jan 25, 2010, at 5:34 PM, cstrato wrote:
Dear Simon,
Thank you, with this version I could finally compile ROOT as 64 bit.
Now I have one more question:
When I do R CMD Install xps.tar.gz which now depends on 64 bit ROOT, do I
need to install the 64 bit version of R or can I use the
Dear Kasper,
You are right. Since ROOT supports the CC, CXX, F77 and LD flags I did:
./configure macosx64 --with-cxx=/usr/bin/g++-4.2 -arch x86_64
--with-f77=/usr/bin/gfortran-4.2 -arch x86_64
The error was still the same:
i686-apple-darwin9-g++-4.2.1: libgfortran.dylib: No such file or
On Jan 24, 2010, at 3:28 PM, cstrato wrote:
Dear Kasper,
You are right. Since ROOT supports the CC, CXX, F77 and LD flags I did:
./configure macosx64 --with-cxx=/usr/bin/g++-4.2 -arch x86_64
--with-f77=/usr/bin/gfortran-4.2 -arch x86_64
You don't really need the override - it works
Dear Kasper,
Thank you for your suggestion, I did indeed use gcc 4.0.
Since gcc_select does no longer exist on Leopard I had to do:
cd /usr/bin
sudo ln -s gcc-4.2 gcc
sudo ln -s g++-4.2 g++
sudo ln -s gcov-4.2 gcov
Sadly, compiling ROOT resulted still in the same error:
On Jan 23, 2010, at 8:37 AM, cstrato wrote:
Dear Kasper,
Thank you for your suggestion, I did indeed use gcc 4.0.
Since gcc_select does no longer exist on Leopard I had to do:
cd /usr/bin
sudo ln -s gcc-4.2 gcc
sudo ln -s g++-4.2 g++
sudo ln -s gcov-4.2 gcov
I am not sure this is
Dear Simon,
Thank you for this information.
Now I have installed gfortran-4.2-5564-darwin9.tar.gz on Leopard and
tried to compile ROOT again, but this time I got the following error:
g++ -dynamiclib -single_module -undefined dynamic_lookup -install_name
@rpath/libminicern.so -O2 -m64 -o
Remember that Apple has two version of GCC on Leopard: 4.0 and 4.2. You are
using 4.0, you might want to switch to 4.2. In Tiger there used to be
gcc_select (or select_gcc) that let you choose between 3.x and 4.0, I don't
remember if that is still around on Leopard.
The error seems to
Dear all,
I have the following problem:
My Bioconductor package xps requires both R and ROOT, whereby I compile
ROOT usually from source. Until now this has not been a problem since I
do all my development on Tiger. However, now I wanted to compile ROOT on
Leopard but failed since my gfortran
On Jan 21, 2010, at 14:47 , cstrato wrote:
Dear all,
I have the following problem:
My Bioconductor package xps requires both R and ROOT, whereby I
compile ROOT usually from source. Until now this has not been a
problem since I do all my development on Tiger. However, now I
wanted to
Dear Simon,
Thank you for your fast reply.
At the moment I have installed gfortran-4.2.3.dmg from your web-site.
Which package do you mean with gfortran 4.2.4?
- gfortran-42-5646.pkg which requires Snow Leopard, or
- gfortran-4.2-5564-darwin9.tar.gz which I assume that I need to compile
from
Dear Simon,
One more question:
I have just unzipped gfortran-4.2-5564-darwin9.tar.gz. The version gives:
Using built-in specs.
Target: i686-apple-darwin9
Configured with: /Builds/gcc/gcc_42-5564/build/obj/src/configure
--disable-checking --enable-werror --prefix=/usr --mandir=/usr/share/man
On Jan 21, 2010, at 15:56 , cstrato wrote:
Dear Simon,
One more question:
I have just unzipped gfortran-4.2-5564-darwin9.tar.gz. The version
gives:
Using built-in specs.
Target: i686-apple-darwin9
Configured with: /Builds/gcc/gcc_42-5564/build/obj/src/configure --
disable-checking
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