Re: [R-sig-phylo] Possible Error in prop.part() ?

David, Your example works correctly for me. A bug was fixed in prop.part() in ape 2.7 but this apparently affected some unrooted trees, while your trees are clearly rooted. Best, Emmanuel David Bapst wrote on 26/03/2011 04:32: Hello all, I was using prop.part() to identify nodes shared

Re: [R-sig-phylo] reading nexus file from treebase?

Hi Mark, Brian and others, Mark Holder wrote on 25/03/2011 23:12: Hi all, Adding a command skipping feature to ape, might make it a good bit more robust to some of the weird files that are out there. I'm afraid that I'm not familiar enough with the code to suggest where those changes should go.

[R-sig-phylo] Phyloinformatics Summer of Code 2011 - Call for student applications

*** Please disseminate widely at your local institutions, *** *** including posting to message and job boards, so that *** *** we reach as many interested students as possible. *** PHYLOINFORMATICS SUMMER OF CODE 2011 http://informatics.nescent.org/wiki/Phyloinformatics_Summer_of_Code_2011