Hi Marcelo,
unfortunately incongruence is not well defined. Here are several
possibilities to access incongruence,
with phangorn/ ape. I would first check if the base frequencies are similar
in each partitions.
There are a few exploratory tools for displaying incongruence like split
networks or
Hi,
I'd like to know if anyone is aware of any tool in R to assess incongruence
among dna partitions.
Best,
Marcelo
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