[R-sig-phylo] Estimating tip rates of molecular evolution

2022-11-17 Thread Karla Shikev
Dear all, I want to test for a relationship between interspecific rates of evolution and a continuous predictor variable. I didn't want to use species pairs because they end up looking a lot of information. The method implemented in Colevol is very elegant, but is computationally unfeasible with

Re: [R-sig-phylo] Estimating tip rates of molecular evolution

2022-11-17 Thread Jacob Berv
One way to do it with pGLS and root to tip path length may be to include the number of nodes along a root to tip path as a control for node density effects (maybe with some transformation). I don't know how well that will work, but I am also experimenting with similar questions. Another way is to