Re: [R-sig-phylo] R-sig-phylo Digest, Vol 95, Issue 6

2015-12-11 Thread Jacob Berv
There appears to be some issues with ggtree plotting BEAST output - I just tried to run through the example and got the following errors: source("https://bioconductor.org/biocLite.R;) biocLite("ggtree") require("ggtree") > file <- system.file("extdata/BEAST", "beast_mcc.tree",

Re: [R-sig-phylo] R-sig-phylo Digest, Vol 95, Issue 6

2015-12-11 Thread Jacob Berv
Whoops! nevermind. It appears read.beast was being masked from read.beast in phyloch. Working now. Jake > On Dec 11, 2015, at 12:56 PM, Jacob Berv > wrote: > > There appears to be some issues with ggtree plotting BEAST output - I just > tried to run through