There appears to be some issues with ggtree plotting BEAST output - I just
tried to run through the example and got the following errors:
source("https://bioconductor.org/biocLite.R;)
biocLite("ggtree")
require("ggtree")
> file <- system.file("extdata/BEAST", "beast_mcc.tree",
Whoops! nevermind. It appears read.beast was being masked from read.beast in
phyloch. Working now.
Jake
> On Dec 11, 2015, at 12:56 PM, Jacob Berv
> wrote:
>
> There appears to be some issues with ggtree plotting BEAST output - I just
> tried to run through