Re: [R-sig-phylo] How to cluster sequences in different OTUs

2013-03-15 Thread Jombart, Thibaut
[s_d_j_br...@hotmail.com] Sent: 14 March 2013 21:18 To: r-sig-phylo@r-project.org; gian.benu...@gmail.com Subject: Re: [R-sig-phylo] How to cluster sequences in different OTUs Date: Thu, 14 Mar 2013 10:21:39 +0100 From: Gian Maria Niccol? Benucci gian.benu...@gmail.com To: r-sig-phylo@r-project.org

[R-sig-phylo] How to cluster sequences in different OTUs

2013-03-14 Thread Gian Maria Niccolò Benucci
Hi everyone, I was wondering is exist a function that is able to generate OTUs from a sequences database. Thank you very much in advance, -- Gian [[alternative HTML version deleted]] ___ R-sig-phylo mailing list - R-sig-phylo@r-project.org

Re: [R-sig-phylo] How to cluster sequences in different OTUs

2013-03-14 Thread Rupert Collins
and optim.pml) in phangorn, and the chronopl function in ape. Hope this helps. Message: 1 Date: Thu, 14 Mar 2013 10:21:39 +0100 From: Gian Maria Niccol? Benucci gian.benu...@gmail.com To: r-sig-phylo@r-project.org Subject: [R-sig-phylo] How to cluster sequences in different OTUs Message-ID

Re: [R-sig-phylo] How to cluster sequences in different OTUs

2013-03-14 Thread Sam Brown
Date: Thu, 14 Mar 2013 10:21:39 +0100 From: Gian Maria Niccol? Benucci gian.benu...@gmail.com To: r-sig-phylo@r-project.org Subject: [R-sig-phylo] How to cluster sequences in different OTUs Hi everyone, I was wondering is exist a function that is able to generate OTUs from a sequences