Re: [R-sig-phylo] PGLS, categorical data and regression through origin

2012-06-07 Thread Julien Lorion
.it [ppi...@uniroma3.it] Sent: Wednesday, June 06, 2012 9:55 AM To: Julien Lorion Cc: r-sig-phylo@r-project.org Subject: Re: [R-sig-phylo] PGLS, categorical data and regression through origin Dear Julien, maybe I dont understand your rmodel...but IF your model has one continuous dep

[R-sig-phylo] PGLS, categorical data and regression through origin

2012-06-06 Thread Julien Lorion
Dear colleagues, I am testing the impact of categorical binary characters (habitat and presence/absence of symbionts) on a continuous variable (log of body size) using PGLS... I am not sure if I should remove the intercept from the formulae and the biological interpretation of the absence

Re: [R-sig-phylo] PGLS, categorical data and regression through origin

2012-06-06 Thread ppiras
Dear Julien, maybe I dont understand your rmodel...but IF your model has one continuous dep. and one categorical (binary) indep. it looks like an ANOVA model: in this case phy.anova() [or phy.manova() if you have 1 dependents] in the R package geiger does it. IF the model is different