Re: [R-sig-phylo] Using node labels to determine edge colouring, widths etc.

2011-05-12 Thread Alastair Potts
Hi All, I'm just submitting this request again, in case someone has a solution, but I caught them at a bad time. Any help would be greatly appreciated. Cheers, Alastair On 2011/05/08 04:10 PM, Alastair Potts wrote: Good day all, I have been trying to figure out how the nodes and edges are

Re: [R-sig-phylo] Using node labels to determine edge colouring, widths etc.

2011-05-12 Thread isabelle boulangeat
Hi, I wrote a code some times ago to do this. It perhaps needs to be adapted. Do not hesitate to ask if it is not clear. library(ape) #===FONCTION= `edgeAttributes` - function(node.values, tree,

[R-sig-phylo] Using node labels to determine edge colouring, widths etc.

2011-05-08 Thread Alastair Potts
Good day all, I have been trying to figure out how the nodes and edges are related. Specifically, I would like to colour edges based on bootstrap support values of nodes (i.e. say a node has a bootstrap value 80%, then I would like to make the preceding edge red). I've explored the