Re: [R-sig-phylo] Chronos function in ape

Hi Marco, chronos uses specific models for the variation in substitution rates among branches and I'm not sure whether these models apply to your data. Maybe you can use chronos with model = "clock" if you can assume that drift is constant throughout your tree. HTH Emmanuel Le 06/07/2016

Re: [R-sig-phylo] 'T151: New Approaches to Phylogenetic Paleobiology' at GSA Annual Meeting 2016. Sept 25-28 in Denver

Hi all, Just a short reminder, that abstract submission for GSA (and thus for our session) closes on July 12th, which is less than a week away. Cheers! -Dave On Mon, Apr 4, 2016 at 10:25 AM, David Bapst wrote: > Hello all, > > We are pleased to announce a topical session

Re: [R-sig-phylo] suppress axes in phenogram()

My ugly solution is to comment out lines 195 and 196 in the phenogram code. Jake > On Jul 7, 2016, at 5:06 PM, Jacob Berv wrote: > > Cool - that works - but now I can’t use axis() to add custom axes… > Jake > >> On Jul 7, 2016, at 5:03 PM, Liam J. Revell

Re: [R-sig-phylo] suppress axes in phenogram()

try: par(xaxt="n",yaxt="n") phenogram(tree,x) par(xaxt="s",yaxt="s") axis(1) Graham -- Graham J. Slater Assistant Professor Department of the Geophysical Sciences University of Chicago 5734 S. Ellis Avenue Chicago, IL 60637 USA Tel: (773)

[R-sig-phylo] suppress axes in phenogram()

Hi all, Does anyone know if there is an easy way to suppress the axes in phytools phenogram() without altering the code (which is easy to do, but inconvenient when using the function in multiple different contexts)? yaxt=’n’ and xaxt=’n’ have no effect. Best, Jacob Berv