[R-sig-phylo] (no subject)
Hi, i have a new problem, when i try this : > pglsModel3 <- gls(lnBRW ~ lnBW, correlation = corMartins(1,phy = DIV, > fixed=FALSE), + data = classeur, method = "ML") R send : Error in recalc.corStruct(object[[i]], conLin) : NA/NaN/Inf in foreign function call (arg 4) How can i do to resolve this problem ? Thank's a lot . NB [[alternative HTML version deleted]] ___ R-sig-phylo mailing list - R-sig-phylo@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-phylo Searchable archive at http://www.mail-archive.com/r-sig-phylo@r-project.org/
[R-sig-phylo] (no subject)
Hello, I am trying to calcultae and plot bootstrap with pohangorn, but something does not work : align1-read.dna(datacr.fas, format=fasta) #class DNAbin align2- as.phyDat(align1) #class phyDat treeMP - pratchet(align2) bs-bootstrap.phyDat(treeMP.new, bs=100)#just for test but it gives Erreur dans rep(1:length(weight), weight) : argument 'times' incorrect thanks a lot! -- -- Catherine Reeb Museum National D'histoire Naturelle Département Systématique et Evolution Case postale 39 UMR CNRS 7205 57 rue cuvier FRANCE-75005 Paris portable +33629375132 poste 0140793200 [[alternative HTML version deleted]] ___ R-sig-phylo mailing list - R-sig-phylo@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-phylo Searchable archive at http://www.mail-archive.com/r-sig-phylo@r-project.org/
Re: [R-sig-phylo] (no subject)
Sorry I forgot the subject! Boostrap on mp tree 2014-06-03 9:14 GMT+02:00 catherine reeb r...@mnhn.fr: Hello, I am trying to calcultae and plot bootstrap with pohangorn, but something does not work : align1-read.dna(datacr.fas, format=fasta) #class DNAbin align2- as.phyDat(align1) #class phyDat treeMP - pratchet(align2) bs-bootstrap.phyDat(treeMP.new, bs=100)#just for test but it gives Erreur dans rep(1:length(weight), weight) : argument 'times' incorrect thanks a lot! -- -- Catherine Reeb Museum National D'histoire Naturelle Département Systématique et Evolution Case postale 39 UMR CNRS 7205 57 rue cuvier FRANCE-75005 Paris portable +33629375132 poste 0140793200 [[alternative HTML version deleted]] ___ R-sig-phylo mailing list - R-sig-phylo@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-phylo Searchable archive at http://www.mail-archive.com/r-sig-phylo@r-project.org/ -- -- Catherine Reeb Museum National D'histoire Naturelle Département Systématique et Evolution Case postale 39 UMR CNRS 7205 57 rue cuvier FRANCE-75005 Paris portable +33629375132 poste 0140793200 [[alternative HTML version deleted]] ___ R-sig-phylo mailing list - R-sig-phylo@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-phylo Searchable archive at http://www.mail-archive.com/r-sig-phylo@r-project.org/
[R-sig-phylo] (no subject)
Hello everybody, does somebody know about the possibility of drawing hyperbolic trees with R ? Thanks a lot, [[alternative HTML version deleted]] ___ R-sig-phylo mailing list R-sig-phylo@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-phylo
