Dear All,
Just to avoid confusion, the readNexus function is in the phylobase
package. And as Ben pointed out, other packages have their own functions
for reading the data part from a nexus-formatted file, see e.g., read.nex
in phyloch.
On a related note, I wrote read.nexus.data as a temporary,
Hi all,
I had a short look in the code and found some bits to speed the
read.nexus.data function up. I added Emmanuel on the list so he may
can put it into the next ape release if it does work.
Generally I agree with Johan that if speed matters fasta files are the
way to go. Nexus files are ugly
On 13-04-05 01:29 PM, Jessica Sabo wrote:
Hi All,
I am wondering if there is anyway to increase the speed of the
read.nexus.data parser. Or if there is an alternative that is a
faster nexus file data parser.
THanks, Jess
I don't know if it's faster or not, but there is ?readNexus in
