Re: [R-sig-phylo] simulate tree by specifying taxa distance

2016-11-03 Thread Yu, Guangchuang
Dear Guilio, Thank you! I will try phytools. Best wishes, Guangchuang On Thu, Nov 3, 2016 at 11:57 PM, Giulio V. Dalla Riva wrote: > Dear Guangchuang, > > > Wouldn't that require that the distance between root and current time is, > at most, 0.05 (= 0.1 /2) ? > > In that case, I believe you ju

Re: [R-sig-phylo] simulate tree by specifying taxa distance

2016-11-03 Thread Giulio V. Dalla Riva
Dear Guangchuang, Wouldn't that require that the distance between root and current time is, at most, 0.05 (= 0.1 /2) ? In that case, I believe you just need to rescale the tree you simulated. That can be done in a number of way according to which package you use, e.g., in phytool: pbtree(n=1