Re: [Rdkit-devel] More build fun with RHEL 6

2016-04-14 Thread Greg Landrum 
Now that I have a Centos6 box available, I'm realizing that it has python
2.6
Are you also installing Python 2.7 on those machines when you build the
RDKit?

On Thu, Apr 14, 2016 at 12:18 PM, Gianluca Sforna  wrote:

> For the records, Build with RHEL/CentOS 7 succeded, this leaves us
> with only one platform where it fails; if we think the older boost
> version cannot be supported, I can just stick to an older release for
> EL6
>
> On Thu, Apr 14, 2016 at 11:47 AM, Gianluca Sforna 
> wrote:
> > On Thu, Apr 14, 2016 at 11:37 AM, Greg Landrum 
> wrote:
> >> Which version of boost are you using?
> >
> > RPMs are built against the packages in the repositories (stock+updates).
> >
> > Right now it means 1.41.0 for RHEL6, 1.53 for RHEL 7 (building now,
> > will let you know how it goes)
>
>
>
> --
> Gianluca Sforna
>
> http://plus.google.com/+gianlucasforna - http://twitter.com/giallu
> Tinker Garage - http://tinkergarage.it
>
--
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Re: [Rdkit-devel] More build fun with RHEL 6

2016-04-14 Thread Greg Landrum 
That'd be awesome.. thanks. :-)

On Thu, Apr 14, 2016 at 1:44 PM, Brian Kelley  wrote:

> The fix is buried here:
>
> https://github.com/rdkit/rdkit/pull/677/files
>
> It is in the BOOST_PYTHON_SUPPORT_SHARED_CONST
>
> The reason we didn't merge is was the problem with the exported defines,
> however I can tie it into the boost version in the FilterCatalog header
> file.  We had initially thought this only affected RHEL5 so it was a lower
> priority, I can have a PR by the end of the day (maybe even the Basel day :)
>
>
>
> On Thu, Apr 14, 2016 at 7:01 AM, Greg Landrum 
> wrote:
>
>> Under any circumstances: if we only support more recent versions we
>> should indicate that in the CMakeLists.txt, which claims to support back to
>> boost 1.39 with python2 and 1.45 with python3.
>>
>> I will take a look
>>
>> On Thu, Apr 14, 2016 at 12:58 PM, Brian Kelley 
>> wrote:
>>
>>> I think I have seen this before in FilterCatalog, I can try to patch it
>>> for boost 1.41 but I will say that version of boost is getting pretty long
>>> in the tooth.
>>>
>>> 
>>> Brian Kelley
>>>
>>> On Apr 14, 2016, at 6:43 AM, Greg Landrum 
>>> wrote:
>>>
>>> I'd like to have it work on EL6; that's still pretty common.
>>> I will make some time to investigate either this evening or tomorrow.
>>>
>>> Thanks for narrowing it down so much.
>>> -greg
>>>
>>>
>>> On Thu, Apr 14, 2016 at 12:18 PM, Gianluca Sforna 
>>> wrote:
>>>
 For the records, Build with RHEL/CentOS 7 succeded, this leaves us
 with only one platform where it fails; if we think the older boost
 version cannot be supported, I can just stick to an older release for
 EL6

 On Thu, Apr 14, 2016 at 11:47 AM, Gianluca Sforna 
 wrote:
 > On Thu, Apr 14, 2016 at 11:37 AM, Greg Landrum <
 greg.land...@gmail.com> wrote:
 >> Which version of boost are you using?
 >
 > RPMs are built against the packages in the repositories
 (stock+updates).
 >
 > Right now it means 1.41.0 for RHEL6, 1.53 for RHEL 7 (building now,
 > will let you know how it goes)



 --
 Gianluca Sforna

 http://plus.google.com/+gianlucasforna - http://twitter.com/giallu
 Tinker Garage - http://tinkergarage.it

>>>
>>>
>>> --
>>> Find and fix application performance issues faster with Applications
>>> Manager
>>> Applications Manager provides deep performance insights into multiple
>>> tiers of
>>> your business applications. It resolves application problems quickly and
>>> reduces your MTTR. Get your free trial!
>>> https://ad.doubleclick.net/ddm/clk/302982198;130105516;z
>>>
>>> ___
>>> Rdkit-devel mailing list
>>> Rdkit-devel@lists.sourceforge.net
>>> https://lists.sourceforge.net/lists/listinfo/rdkit-devel
>>>
>>>
>>
>
--
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Re: [Rdkit-devel] More build fun with RHEL 6

2016-04-14 Thread Brian Kelley 
The fix is buried here:

https://github.com/rdkit/rdkit/pull/677/files

It is in the BOOST_PYTHON_SUPPORT_SHARED_CONST

The reason we didn't merge is was the problem with the exported defines,
however I can tie it into the boost version in the FilterCatalog header
file.  We had initially thought this only affected RHEL5 so it was a lower
priority, I can have a PR by the end of the day (maybe even the Basel day :)



On Thu, Apr 14, 2016 at 7:01 AM, Greg Landrum 
wrote:

> Under any circumstances: if we only support more recent versions we should
> indicate that in the CMakeLists.txt, which claims to support back to boost
> 1.39 with python2 and 1.45 with python3.
>
> I will take a look
>
> On Thu, Apr 14, 2016 at 12:58 PM, Brian Kelley 
> wrote:
>
>> I think I have seen this before in FilterCatalog, I can try to patch it
>> for boost 1.41 but I will say that version of boost is getting pretty long
>> in the tooth.
>>
>> 
>> Brian Kelley
>>
>> On Apr 14, 2016, at 6:43 AM, Greg Landrum  wrote:
>>
>> I'd like to have it work on EL6; that's still pretty common.
>> I will make some time to investigate either this evening or tomorrow.
>>
>> Thanks for narrowing it down so much.
>> -greg
>>
>>
>> On Thu, Apr 14, 2016 at 12:18 PM, Gianluca Sforna 
>> wrote:
>>
>>> For the records, Build with RHEL/CentOS 7 succeded, this leaves us
>>> with only one platform where it fails; if we think the older boost
>>> version cannot be supported, I can just stick to an older release for
>>> EL6
>>>
>>> On Thu, Apr 14, 2016 at 11:47 AM, Gianluca Sforna 
>>> wrote:
>>> > On Thu, Apr 14, 2016 at 11:37 AM, Greg Landrum 
>>> wrote:
>>> >> Which version of boost are you using?
>>> >
>>> > RPMs are built against the packages in the repositories
>>> (stock+updates).
>>> >
>>> > Right now it means 1.41.0 for RHEL6, 1.53 for RHEL 7 (building now,
>>> > will let you know how it goes)
>>>
>>>
>>>
>>> --
>>> Gianluca Sforna
>>>
>>> http://plus.google.com/+gianlucasforna - http://twitter.com/giallu
>>> Tinker Garage - http://tinkergarage.it
>>>
>>
>>
>> --
>> Find and fix application performance issues faster with Applications
>> Manager
>> Applications Manager provides deep performance insights into multiple
>> tiers of
>> your business applications. It resolves application problems quickly and
>> reduces your MTTR. Get your free trial!
>> https://ad.doubleclick.net/ddm/clk/302982198;130105516;z
>>
>> ___
>> Rdkit-devel mailing list
>> Rdkit-devel@lists.sourceforge.net
>> https://lists.sourceforge.net/lists/listinfo/rdkit-devel
>>
>>
>
--
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Applications Manager provides deep performance insights into multiple tiers of
your business applications. It resolves application problems quickly and
reduces your MTTR. Get your free trial!
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