Re: [Rdkit-discuss] Finding possible reaction products

2018-02-06 Thread Jan Halborg Jensen
One option is to construct a library of reaction SMARTS for common chemical reactions. Another, more exhaustive, approach is enumerate all possible connectivity matrices and convert them to molecules See DOI: 10.1039/C7SC03628K and https://github.com/jensengroup/xyz2mol I am working on

[Rdkit-discuss] Finding possible reaction products

2018-02-06 Thread Francisco Leskovar
Hi all! I was wondering what is the best approach to generating all the possible products for a given set of reactants using RDkit. My goal is to be able to find all possible products and then carry out a Nuged Elastic Band calculation to estimate the rate constants of those reactions. I would