Re: [Rdkit-discuss] Using the new drawing code

2017-09-15 Thread Michał Nowotka
Perfect, thank you! On Fri, Sep 15, 2017 at 9:47 AM, Greg Landrum wrote: > > > On Fri, Sep 15, 2017 at 9:25 AM, Michał Nowotka wrote: >> >> Thanks Greg, very helpful! >> Can you tell me how should I modify my code to provide the list of >> bonds to be

Re: [Rdkit-discuss] Using the new drawing code

2017-09-15 Thread Greg Landrum
On Fri, Sep 15, 2017 at 9:25 AM, Michał Nowotka wrote: > Thanks Greg, very helpful! > Can you tell me how should I modify my code to provide the list of > bonds to be highlighted, so I get the image generated by DrawMolecules > looking the same way as produced by DrawMolecule?

Re: [Rdkit-discuss] Using the new drawing code

2017-09-15 Thread Michał Nowotka
Thanks Greg, very helpful! Can you tell me how should I modify my code to provide the list of bonds to be highlighted, so I get the image generated by DrawMolecules looking the same way as produced by DrawMolecule? On Thu, Sep 14, 2017 at 4:36 PM, Greg Landrum wrote: > Hi

Re: [Rdkit-discuss] Using the new drawing code

2017-09-14 Thread Greg Landrum
Hi Michal, There are a couple of things in here. On Fri, Aug 25, 2017 at 11:42 AM, Michał Nowotka wrote: > Hi, > > I finally decided to try the new C++ drawing code and I found some > issues with it. I'll try to descibe my problems. > > First, lets start with a code that

[Rdkit-discuss] Using the new drawing code

2017-08-25 Thread Michał Nowotka
Hi, I finally decided to try the new C++ drawing code and I found some issues with it. I'll try to descibe my problems. First, lets start with a code that works perfectly: from rdkit import Chem from rdkit.Chem.AllChem import Compute2DCoords from rdkit.Chem.Draw import rdMolDraw2D m =