Re: [Rdkit-discuss] Molecules not rendere in Dataframe

2019-11-06 Thread Greg Landrum
Yes, I can confirm that this is a problem caused by changes in Pandas v0.25.x Now we just need to figure out what those changes are and how to work around them. Here's a github issue to track the problem: https://github.com/rdkit/rdkit/issues/2673 -greg On Tue, Nov 5, 2019 at 12:21 PM Jan

Re: [Rdkit-discuss] Molecules not rendere in Dataframe

2019-11-05 Thread Jan Halborg Jensen
Hi again, Since I thought it might be a Colab problem I also posted the question on Stackoverflow, and got an answer from Oliver Scott https://stackoverflow.com/questions/58656572/problem-using-addmoleculecolumntoframe-on-google-colab/58690736#58690736 "Seems like this is a problem with all

Re: [Rdkit-discuss] Molecules not rendere in Dataframe

2019-11-04 Thread Jan Halborg Jensen
I posted basically the same question on Friday. I thought it was a Google Colab problem, but apparently it is a more general problem. On 4 Nov 2019, at 19.47, Markus Heller mailto:mhel...@admarebio.com>> wrote: Hi, In a Jupyter notebook, the following code does not show renderings of the

Re: [Rdkit-discuss] Molecules not rendere in Dataframe

2019-11-04 Thread Jennifer Wei via Rdkit-discuss
Jan, I think this is the same issue you ran into in your example colab? On Mon, Nov 4, 2019 at 2:03 PM Markus Heller wrote: > Hi, > > > > In a Jupyter notebook, the following code does not show renderings of the > molecules in a Pandas dataframe: > > > > > > from rdkit import Chem > > from