Re: [Rdkit-discuss] Using ChemicalReactions to set double bond (E/Z)

2014-11-12 Thread Matthew Lardy
Hi Greg, It has been a long time since I have done things like this with a Smarts based transformation. You are right, I forgot the specification for the double bond on the other side. If you add it, there isn't any change in the output on my side. I am using the most recent release of RDKit

Re: [Rdkit-discuss] Using ChemicalReactions to set double bond (E/Z)

2014-11-11 Thread Greg Landrum
Hi Matthew, On Wed, Nov 12, 2014 at 12:24 AM, Matthew Lardy mla...@gmail.com wrote: What I hope is a quick question. I have a smiles string of a compound with an exo-double bond that does not specify E or Z. I want to take these geometry unspecified smiles strings and force one