Re: [Rdkit-discuss] Updates to the build system
On 15/09/10 05:38, Greg Landrum wrote: Dear all, Thanks to some really great help from Gianluca Sforna and Riccardo Vianello, the RDKit build system has been updated to make installing the software in standard locations (like /usr/local on linux machines) easier. The changes should also make it possible for the RDKit to be packaged for integration with linux distributions, which will make it lot easier for people who don't want to have to think about compiling things to install the RDKit. This is exciting news. There are instructions for the updated build system here: http://code.google.com/p/rdkit/wiki/NewLinuxBuild Please note that the default behavior should be basically the same as the previous system, so the following should still work: % mkdir build; cd build % cmake .. % make install The only difference should be that you need to add $RDBASE/lib to LD_LIBRARY_PATH instead of $RDBASE/bin It would be really, really helpful if people could try out the new system and let us know how it works. Thanks - this is a substantial step forward in convenience. Works great. I am using this system now to compile and link with my app. Cheers, Paul. -- Start uncovering the many advantages of virtual appliances and start using them to simplify application deployment and accelerate your shift to cloud computing. http://p.sf.net/sfu/novell-sfdev2dev ___ Rdkit-discuss mailing list Rdkit-discuss@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rdkit-discuss
[Rdkit-discuss] cmake does not find my boost libraries
Hi all, I am using a Linux machine which has an old version of boost. I am trying to install RDKit following these instructions http://code.google.com/p/rdkit/wiki/BuildingWithCmake Everything went OK in the Building the Code section. I did : ./bootstrap.sh --with-libraries=python,regex --prefix=/home/me/progs/ ./bjam address-model=64 cflags=-fPIC cxxflags=-fPIC install Then I set the environment variables in my bash_profile file. = # PATH=$HOME/progs/bin:$PATH # RDKIT export RDBASE=$RDBASE:/home/me/download/RDKit_Q22010_1 export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$RDBASE/bin:/home/me/download/boost_1_44_0:/home/me/progs/ # python export PYTHONPATH=$PYTHONPATH:/home/me/work/code/python/general:/home/me/work/code/python:/home/me/progs/lib/python2.5/site-packages:$RDBASE # LANG=C # TERM=linux export TERM == Then I tried cmake .. cmake -DBOOST_ROOT=/home/me/progs/ .. cmake -DBOOST_ROOT=/home/me/download/boost_1_44_0 .. I also tried to set the BOOST_ROOT variable in my bach_profile. All of these attempts gave the same error message CMake Error at /home/me/progs/share/cmake-2.8/Modules/FindBoost.cmake:910 (message): Unable to find the requested Boost libraries. Boost version: 1.33.1 Boost include path: /usr/include Detected version of Boost is too old. Requested version was 1.39 (or newer). The following Boost libraries could not be found: boost_python No Boost libraries were found. You may need to set Boost_LIBRARYDIR to the directory containing Boost libraries or BOOST_ROOT to the location of Boost. Call Stack (most recent call first): CMakeLists.txt:47 (find_package) CMake Error at /home/me/progs/share/cmake-2.8/Modules/FindBoost.cmake:910 (message): Unable to find the requested Boost libraries. Boost version: 1.33.1 Boost include path: /usr/include Detected version of Boost is too old. Requested version was 1.39 (or newer). The following Boost libraries could not be found: boost_regex No Boost libraries were found. You may need to set Boost_LIBRARYDIR to the directory containing Boost libraries or BOOST_ROOT to the location of Boost. Call Stack (most recent call first): Code/GraphMol/SLNParse/CMakeLists.txt:5 (find_package) -- Configuring incomplete, errors occurred! So cmake does not find my boost libraries. This is a very trivial error, but I can't figure out what I did wrong in the installation instructions. I would greatly appreciate any help. Thanks, Jef -- Start uncovering the many advantages of virtual appliances and start using them to simplify application deployment and accelerate your shift to cloud computing. http://p.sf.net/sfu/novell-sfdev2dev ___ Rdkit-discuss mailing list Rdkit-discuss@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rdkit-discuss
