Re: [Rdkit-discuss] explicit H atoms

2021-03-08 Thread Rocco Moretti
On Mon, Mar 8, 2021 at 11:17 AM Paul Emsley 
wrote:

> On 08/03/2021 13:55, Jean-Marc Nuzillard wrote:
> >
> > Is it always possible to represent an organic molecule in 2D with all
> necessary
> > configuration hints (bond wedges pointing to the front or to the back)
> > without introducing any explicit hydrogen atom?
>
> No. Testosterone.
>

Is that "not possible" or simply "against convention"? One could certainly
imagine someone attempting to put the dashed and wedged designations on the
ring bonds, and leaving the hydrogens implicit. (Flagrantly ignoring how
much it would mess with steroid chemists' brains.)
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Re: [Rdkit-discuss] explicit H atoms

2021-03-08 Thread Paul Emsley

On 08/03/2021 13:55, Jean-Marc Nuzillard wrote:



Is it always possible to represent an organic molecule in 2D with all 
necessary

configuration hints (bond wedges pointing to the front or to the back)
without introducing any explicit hydrogen atom?




No. Testosterone.




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[Rdkit-discuss] explicit H atoms

2021-03-08 Thread Jean-Marc Nuzillard

Dear all,

my question of the day is more general than directly related to RDKit
but the link is indirect.

Is it always possible to represent an organic molecule in 2D with all 
necessary

configuration hints (bond wedges pointing to the front or to the back)
without introducing any explicit hydrogen atom?

May be my question is very naive, all my apologies in advance for that.

Best,

Jean-Marc

--
Jean-Marc Nuzillard
Directeur de Recherches au CNRS

Institut de Chimie Moléculaire de Reims
CNRS UMR 7312
Moulin de la Housse
CPCBAI, Bâtiment 18
BP 1039
51687 REIMS Cedex 2
France

Tel : 03 26 91 82 10
Fax : 03 26 91 31 66
http://www.univ-reims.fr/icmr
http://eos.univ-reims.fr/LSD/CSNteam.html

http://www.univ-reims.fr/LSD/
http://www.univ-reims.fr/LSD/JmnSoft/



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