[Rdkit-discuss] GUI Overview

2010-03-12 Thread Cedric MORETTI
Hello,
I try to install and use the GUI that can be seen in the presentation 
RDKit_Overview.pdf on slide 19.
For now only access the command line works.
Thank you
Cédric
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[Rdkit-discuss] (no subject)

2010-03-12 Thread Cedric MORETTI
Hello,
I would like to know if there is someone who uses utility Cinfony with RDKit.
I use version 0.9 of Cinfony and an old version of RDKit (May 2008).
There is no problem when using both programs. But I cannot arrive to install 
version Q2009P25, RDKit module is not found when I loaded.
Although having only replace the contents of the directory rdkit Cinfony.

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[Rdkit-discuss] rdkit and Cinfony

2010-03-12 Thread Cedric MORETTI
Hello,
I would like to know if there is someone who uses utility Cinfony with RDKit.
I use version 0.9 of Cinfony and an old version of RDKit (May 2008).
There is no problem when using both programs. But I cannot arrive to install 
version Q2009P25, RDKit module is not found when I loaded.
Although having only replace the contents of the directory rdkit Cinfony.

Tks
Cedric


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Re: [Rdkit-discuss] rdkit and Cinfony

2010-03-12 Thread Andrew Dalke
On Mar 12, 2010, at 7:23 AM, Cedric MORETTI wrote:
 I would like to know if there is someone who uses utility Cinfony with RDKit.

I have.

I have cinfony-0.9 installed and RDKit_Q32009_1. (At least, I think I do. 
Greg's going to add a version() call in the next release, but there's no 
programmatic way to get the Cinfony version.)


I don't have a problem.

 But I cannot arrive to install version Q2009P25, RDKit module is not found 
 when I loaded.
 Although having only replace the contents of the directory rdkit Cinfony.

Without a traceback giving more details about the error, it's hard to diagnose 
this.

Andrew
da...@dalkescientific.com



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Re: [Rdkit-discuss] rdkit and Cinfony

2010-03-12 Thread Greg Landrum
Hi,

On Fri, Mar 12, 2010 at 3:23 PM, Cedric MORETTI
cedric.more...@firmenich.com wrote:
 Hello,
 I would like to know if there is someone who uses utility Cinfony with
 RDKit.
 I use version 0.9 of Cinfony and an old version of RDKit (May 2008).
 There is no problem when using both programs. But I cannot arrive to install
 version Q2009P25, RDKit module is not found when I loaded.

 Although having only replace the contents of the directory rdkit Cinfony.


I'm not a cinfony user, and it would be helpful to have the full
traceback (as Andrew said), but I can make a guess about this:
The package structure of the RDKit changed between the Q42008 and
Q12009 release. If the older version of Cinfony is expecting the old
RDKit structure, it's not going to work with newer versions. Maybe
there's a newer version of cinfoy you can download?

Best Regards,
-greg

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Try the new software tools for yourself. Speed compiling, find bugs
proactively, and fine-tune applications for parallel performance.
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Re: [Rdkit-discuss] rdkit and Cinfony

2010-03-12 Thread Noel O'Boyle
Hi Cedric,

There will be a new version of cinfony released in the coming week
(and a talk to follow at the ACS, the following week). This supports
the latest version of RDKit. I also promise to set up a proper mailing
list where enquiries of this sort can be sent (sorry Greg).

- Noel

Original message follows:

On Fri, Mar 12, 2010 at 3:23 PM, Cedric MORETTI
cedric.more...@firmenich.com wrote:
 Hello,
 I would like to know if there is someone who uses utility Cinfony with
 RDKit.
 I use version 0.9 of Cinfony and an old version of RDKit (May 2008).
 There is no problem when using both programs. But I cannot arrive to install
 version Q2009P25, RDKit module is not found when I loaded.

 Although having only replace the contents of the directory rdkit Cinfony.


I'm not a cinfony user, and it would be helpful to have the full
traceback (as Andrew said), but I can make a guess about this:
The package structure of the RDKit changed between the Q42008 and
Q12009 release. If the older version of Cinfony is expecting the old
RDKit structure, it's not going to work with newer versions. Maybe
there's a newer version of cinfoy you can download?

Best Regards,
-greg

--
Download Intel#174; Parallel Studio Eval
Try the new software tools for yourself. Speed compiling, find bugs
proactively, and fine-tune applications for parallel performance.
See why Intel Parallel Studio got high marks during beta.
http://p.sf.net/sfu/intel-sw-dev
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