Hi Serenia,

Yep that fixed it!  Thanks!
Matthew

On Fri, Feb 20, 2015 at 10:59 PM, Sereina <sereina.rini...@gmail.com> wrote:

> Hi Matthew,
>
> I think this is related to a previous mailing list item (
> https://www.mail-archive.com/rdkit-discuss@lists.sourceforge.net/msg03528.html
> ).
>
> It has probably something to do with the bounding boxes (they get scaled
> during the map generation process). In the previous case it was enough to
> set bbox_inches='tight' when saving the image to solve the problem.
>
> I hope this helps.
>
> Best,
> Sereina
>
>
> On 21 Feb 2015, at 02:28, Matthew Lardy <mla...@gmail.com> wrote:
>
> Hi,
>
> I am having an issue with the python similaritymaps.  I am only seeing a
> fraction of the molecule.  Anyone else have this issue?
>
> Thanks in advance!
> Matthew
>
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