Re: [Rdkit-discuss] Using RDKit in PyCharm and Anaconda on Windows

2017-06-01 Thread Richard West
Thanks, everyone, for the ideas and suggestions. The easiest thing we have come up with so far, in case this helps anyone else, is to find the shortcut to PyCharm in your Windows Start Menu folder, create a copy of it called something like "PyCharm - your_env" and edit the target so that

[Rdkit-discuss] Getting multiple Kekule forms? Representing like SMILES?

2015-07-04 Thread Richard West
Dear RDKiters, I would like to be able to generate all Kekule forms or resonance isomers of a species. Eg. starting with I would like to generate both of these Is this possible with RDKit? How would you do it? For systems like this I can think of a hacky work-around to post-process the

Re: [Rdkit-discuss] InChI support in Ubuntu repository version of rdkit?

2013-08-05 Thread Richard West
On Aug 5, 2013, at 2:58 AM, Greg Landrum greg.land...@gmail.com wrote: On Fri, Aug 2, 2013 at 11:34 PM, Gianluca Sforna gia...@gmail.com wrote: On Fri, Aug 2, 2013 at 9:35 PM, Richard West r.h.w...@gmail.com wrote: 1) Is there any hope of getting a version with InChI into the Ubuntu

[Rdkit-discuss] InChI support in Ubuntu repository version of rdkit?

2013-08-02 Thread Richard West
Installing RDKit on Ubuntu for my first time I was excited to see it might be as simple as sudo apt-get install python-rdkit librdkit1 rdkit-data, but then discovered that I didn't have InChI support. 1) Is there any hope of getting a version with InChI into the Ubuntu repositories? 2) Is