Re: [Rdkit-discuss] install error

2013-06-05 Thread Yingfeng Wang
Yes. I tried again. This time, after run download-inchi.sh I mkdir build cd build sudo cmake .. -DRDK_BUILD_INCHI_SUPPORT=ON sudo make sudo make install by far, no error reported. but, when I run sudo ctest I got The following tests FAILED: 1 - testInchi (OTHER_FAULT) 3 - testDataStructs

Re: [Rdkit-discuss] install error

2013-06-05 Thread Jan Holst Jensen
Hi Yingfeng, Looks like what happened to me, when I had forgotten to set the environment. Did you set LD_LIBRARY_PATH to $RDBASE/lib before running the tests ? Kind regards -- Jan Holst Jensen On 2013-06-05 16:09, Yingfeng Wang wrote: Yes. I tried again. This time, after run

Re: [Rdkit-discuss] install error

2013-06-05 Thread Jan Holst Jensen
OK, that looks fine. And I assume you build directly in /opt/RDKit_latest/latest/, so 'make install' puts files in /opt/RDKit_latest/latest/lib/. The only other thing that comes to my mind is if your boost libraries are included in LD_LIBRARY_PATH. Cheers -- Jan On 2013-06-05 16:55,

Re: [Rdkit-discuss] install error

2013-06-05 Thread Yingfeng Wang
Jan, Thanks. I just found the problem. The environment setting is in .bashrc, which is not for sudo. Now, I install everything in a local directory, and don't need sudo. Then it works now. Sorry about my confusing mistake. Yingfeng On Wed, Jun 5, 2013 at 11:22 AM, Jan Holst Jensen

[Rdkit-discuss] install error

2013-06-04 Thread Yingfeng Wang
After getting the latest code by git, I install RDKit on my ubuntu 12.04. In the step of make install, I got CMake Error at External/INCHI-API/cmake_install.cmake:124 (FILE): It seems the file $RDBASE/lib/libRDInchiLib.so.1.2013.06.1pre can't be found. Please note that I have turned on the flag