Author: tlinnet
Date: Wed Jun 18 09:25:49 2014
New Revision: 24064
URL: http://svn.gna.org/viewcvs/relax?rev=24064view=rev
Log:
Removed superfluous check, after the returned data is now in right structure.
Task #7807 (https://gna.org/task/index.php?7807): Speed-up of dispersion models
for
Author: tlinnet
Date: Wed Jun 18 09:25:48 2014
New Revision: 24063
URL: http://svn.gna.org/viewcvs/relax?rev=24063view=rev
Log:
Used the new class function: get_back_calc(), to get the data in the right
structures when interpolating for graphs.
Task #7807 (https://gna.org/task/index.php?7807):
Author: tlinnet
Date: Wed Jun 18 09:25:45 2014
New Revision: 24062
URL: http://svn.gna.org/viewcvs/relax?rev=24062view=rev
Log:
Implemented class function in target class, to return back_calc values as list
of lists.
This is the back and forth conversion between the data structures implemented
Author: tlinnet
Date: Wed Jun 18 09:41:11 2014
New Revision: 24065
URL: http://svn.gna.org/viewcvs/relax?rev=24065view=rev
Log:
Made changes to the dir argument of systemtest Relax_disp.test_r1rho_kjaergaard.
This is to prepare for:
sr #3124 (https://gna.org/support/?3124): Grace graphs
Author: bugman
Date: Wed Jun 18 10:12:07 2014
New Revision: 24066
URL: http://svn.gna.org/viewcvs/relax?rev=24066view=rev
Log:
The relaxation dispersion target function can now be set up when the optional
frqs_H argument is None.
This allows the profiling scripts to run.
Modified:
Author: bugman
Date: Wed Jun 18 10:12:35 2014
New Revision: 24067
URL: http://svn.gna.org/viewcvs/relax?rev=24067view=rev
Log:
Typo fix from the previous commit.
Modified:
branches/disp_spin_speed/target_functions/relax_disp.py
Modified:
Author: bugman
Date: Wed Jun 18 10:14:44 2014
New Revision: 24068
URL: http://svn.gna.org/viewcvs/relax?rev=24068view=rev
Log:
More stability fixes for the relaxation dispersion target function
initialisation.
The target function can now be initialised when the r1 and chemical_shift
arguments
Author: tlinnet
Date: Wed Jun 18 10:30:02 2014
New Revision: 24071
URL: http://svn.gna.org/viewcvs/relax?rev=24071view=rev
Log:
Split systemtest test_r1rho_kjaergaard into test_r1rho_kjaergaard_auto and
test_r1rho_kjaergaard_man.
This is to test use of the manual way to analyse.
Task #7807
Author: tlinnet
Date: Wed Jun 18 10:30:00 2014
New Revision: 24070
URL: http://svn.gna.org/viewcvs/relax?rev=24070view=rev
Log:
Renamed systemtes test_r1rho_kjaergaard to test_r1rho_kjaergaard_auto.
This corresponds to the use of the automatic analysis method.
Task #7807
Author: bugman
Date: Wed Jun 18 10:34:26 2014
New Revision: 24072
URL: http://svn.gna.org/viewcvs/relax?rev=24072view=rev
Log:
Modified all of Troels' dispersion profiling scripts to work with older relax
versions.
This is in preparation for obtaining some powerful timing statistics. The
Author: tlinnet
Date: Wed Jun 18 10:35:42 2014
New Revision: 24073
URL: http://svn.gna.org/viewcvs/relax?rev=24073view=rev
Log:
Implemented systemtest test_r1rho_kjaergaard_missing_r1, for safety check if R1
data is not loaded.
The systemtest passes, so target function is safe.
Task #7807
Author: bugman
Date: Wed Jun 18 10:38:16 2014
New Revision: 24074
URL: http://svn.gna.org/viewcvs/relax?rev=24074view=rev
Log:
Python 3 support for the dispersion profiling scripts.
The xrange() builtin function does not exist in Python 3, so this is now
aliased to range() which is
the same
Author: tlinnet
Date: Wed Jun 18 10:44:04 2014
New Revision: 24075
URL: http://svn.gna.org/viewcvs/relax?rev=24075view=rev
Log:
Replaced double or triple hash-tags ## with single hash-tags #.
Task #7807 (https://gna.org/task/index.php?7807): Speed-up of dispersion models
for Clustered analysis.
Author: tlinnet
Date: Wed Jun 18 10:49:10 2014
New Revision: 24076
URL: http://svn.gna.org/viewcvs/relax?rev=24076view=rev
Log:
Copyright fixes for all the models, where Troels E. Linnet have made changes to
make them functional for higher dimensional data.
Task #7807
Author: tlinnet
Date: Wed Jun 18 10:50:36 2014
New Revision: 24077
URL: http://svn.gna.org/viewcvs/relax?rev=24077view=rev
Log:
Copyright fix for model TSMFK01.
Sebastien Morin did not take part of implementing the TSMK01 modelÃ.
Task #7807 (https://gna.org/task/index.php?7807): Speed-up of
Author: bugman
Date: Wed Jun 18 11:31:35 2014
New Revision: 24078
URL: http://svn.gna.org/viewcvs/relax?rev=24078view=rev
Log:
Created a super script for profiling the relaxation dispersion models.
This script will execute all of the current profiling scripts in the directory
Author: bugman
Date: Wed Jun 18 11:32:33 2014
New Revision: 24079
URL: http://svn.gna.org/viewcvs/relax?rev=24079view=rev
Log:
Increased the number of iterations to 1000 in all of the profiling scripts.
This is for better statistics in the disp_profile_all.py script, and makes the
number
Author: bugman
Date: Wed Jun 18 11:34:03 2014
New Revision: 24080
URL: http://svn.gna.org/viewcvs/relax?rev=24080view=rev
Log:
Added a log file for comparing the speed of the disp_speed_branch to relax
3.2.2.
This is from the disp_profile_all.py statistics generating script.
Added:
Author: tlinnet
Date: Wed Jun 18 11:37:12 2014
New Revision: 24081
URL: http://svn.gna.org/viewcvs/relax?rev=24081view=rev
Log:
Made the processor.return_object get the back_calc structure in the expected
order.
Task #7807 (https://gna.org/task/index.php?7807): Speed-up of dispersion models
Author: bugman
Date: Wed Jun 18 11:39:47 2014
New Revision: 24082
URL: http://svn.gna.org/viewcvs/relax?rev=24082view=rev
Log:
Fixed the ordering of the relax versions in the dispersion super profiling
script disp_profile_all.py.
This has also been fixed in the disp_spin_speed branch to relax
Author: tlinnet
Date: Wed Jun 18 11:46:33 2014
New Revision: 24083
URL: http://svn.gna.org/viewcvs/relax?rev=24083view=rev
Log:
Merged revisions 24058 via svnmerge from
svn+ssh://tlin...@svn.gna.org/svn/relax/trunk
r24058 | bugman | 2014-06-17 19:46:10 +0200 (Tue, 17 Jun 2014) | 6
Author: bugman
Date: Wed Jun 18 12:06:56 2014
New Revision: 24084
URL: http://svn.gna.org/viewcvs/relax?rev=24084view=rev
Log:
Added a log file for comparing the speed of the disp_speed_branch to relax
3.2.1.
This is from the disp_profile_all.py statistics generating script.
Added:
Author: bugman
Date: Wed Jun 18 14:09:48 2014
New Revision: 24085
URL: http://svn.gna.org/viewcvs/relax?rev=24085view=rev
Log:
Added a profiling script for the 'NS CPMG 2-site expanded' dispersion model.
This is the model at http://wiki.nmr-relax.com/NS_CPMG_2-site_expanded. The
script was
Author: bugman
Date: Wed Jun 18 14:48:01 2014
New Revision: 24086
URL: http://svn.gna.org/viewcvs/relax?rev=24086view=rev
Log:
Updated the profiling super script and log for the 'NS CPMG 2-site expanded'
model.
This is the model at http://wiki.nmr-relax.com/NS_CPMG_2-site_expanded. This
shows
Author: bugman
Date: Wed Jun 18 15:18:50 2014
New Revision: 24087
URL: http://svn.gna.org/viewcvs/relax?rev=24087view=rev
Log:
Modified all of the dispersion model profiling scripts.
The single() function for timing the single spin target function speed has been
modified to include
a second
Author: bugman
Date: Wed Jun 18 15:20:11 2014
New Revision: 24088
URL: http://svn.gna.org/viewcvs/relax?rev=24088view=rev
Log:
Added a script for profiling the 'NS CPMG 2-site 3D' relaxation dispersion
model.
This is the model at http://wiki.nmr-relax.com/NS_CPMG_2-site_3D. Again this
only
Author: bugman
Date: Wed Jun 18 15:22:21 2014
New Revision: 24089
URL: http://svn.gna.org/viewcvs/relax?rev=24089view=rev
Log:
Added the 'NS CPMG 2-site 3D' model to the dispersion super profiling script.
To handle the fact that this script has nr_iter set to 100 rather than 1000 (as
otherwise
Author: bugman
Date: Wed Jun 18 15:38:33 2014
New Revision: 24090
URL: http://svn.gna.org/viewcvs/relax?rev=24090view=rev
Log:
Support for the 3 vector system for double motions has been added to the frame
order analysis.
This is used for the quasi-random Sobol' numeric integration of the PCS.
Author: tlinnet
Date: Wed Jun 18 15:44:58 2014
New Revision: 24091
URL: http://svn.gna.org/viewcvs/relax?rev=24091view=rev
Log:
Added DPL94 profiling script.
Task #7807 (https://gna.org/task/index.php?7807): Speed-up of dispersion models
for Clustered analysis.
Modified:
Author: tlinnet
Date: Wed Jun 18 15:58:31 2014
New Revision: 24092
URL: http://svn.gna.org/viewcvs/relax?rev=24092view=rev
Log:
Modified profiling script for TSMK01, to use correct parameters k_AB and r20a.
Or else, the lib functions is just calculating with zero?
Task #7807
Author: tlinnet
Date: Wed Jun 18 16:03:46 2014
New Revision: 24093
URL: http://svn.gna.org/viewcvs/relax?rev=24093view=rev
Log:
Changes to profiling script of ns_cpmg_2site_expanded.
The model does not have r20a and r20b, but only r2.
Task #7807 (https://gna.org/task/index.php?7807): Speed-up
Author: tlinnet
Date: Wed Jun 18 16:07:10 2014
New Revision: 24094
URL: http://svn.gna.org/viewcvs/relax?rev=24094view=rev
Log:
Made changes to the profiling script of NS_CPMG_2SITE_3D.
Need to use the full model, when r2a and r2b is specified.
Task #7807 (https://gna.org/task/index.php?7807):
Author: tlinnet
Date: Wed Jun 18 16:17:42 2014
New Revision: 24095
URL: http://svn.gna.org/viewcvs/relax?rev=24095view=rev
Log:
Changes to profiling script of ns expanded.
The unpacking can be removed.
Task #7807 (https://gna.org/task/index.php?7807): Speed-up of dispersion models
for
Author: tlinnet
Date: Wed Jun 18 16:33:46 2014
New Revision: 24096
URL: http://svn.gna.org/viewcvs/relax?rev=24096view=rev
Log:
Fix for the profiling script of NS cpmg 3D.
The model should also be speciffied to full.
Task #7807 (https://gna.org/task/index.php?7807): Speed-up of dispersion
Author: bugman
Date: Wed Jun 18 16:39:53 2014
New Revision: 24097
URL: http://svn.gna.org/viewcvs/relax?rev=24097view=rev
Log:
The disp_profile_all.py super script now prints out the current relax version
information.
This is so that the log files contain information about the repository
Author: tlinnet
Date: Wed Jun 18 16:44:12 2014
New Revision: 24098
URL: http://svn.gna.org/viewcvs/relax?rev=24098view=rev
Log:
Copied profiling script of DPL94 to ns r1rho 2site.
Added:
branches/disp_spin_speed/test_suite/shared_data/dispersion/profiling/profiling_ns_r1rho_2site.py
Author: bugman
Date: Wed Jun 18 16:44:53 2014
New Revision: 24099
URL: http://svn.gna.org/viewcvs/relax?rev=24099view=rev
Log:
Improved the final printout from the disp_profile_all.py dispersion model super
profiling script.
Modified:
Author: tlinnet
Date: Wed Jun 18 16:48:50 2014
New Revision: 24100
URL: http://svn.gna.org/viewcvs/relax?rev=24100view=rev
Log:
Added profiling script for NS R1rho 2site.
Task #7807 (https://gna.org/task/index.php?7807): Speed-up of dispersion models
for Clustered analysis.
Modified:
Author: bugman
Date: Wed Jun 18 16:57:40 2014
New Revision: 24101
URL: http://svn.gna.org/viewcvs/relax?rev=24101view=rev
Log:
The disp_profile_all.py dispersion model super profiling script is now
executable.
Modified:
Author: bugman
Date: Wed Jun 18 17:02:56 2014
New Revision: 24102
URL: http://svn.gna.org/viewcvs/relax?rev=24102view=rev
Log:
Decreased all nr_iter values by 10 and added more dispersion models to the
super profiling script.
This is for the dispersion model profiling scripts in
Author: tlinnet
Date: Wed Jun 18 17:11:24 2014
New Revision: 24103
URL: http://svn.gna.org/viewcvs/relax?rev=24103view=rev
Log:
Moved the Ãparter conversion in LM63 3site into the lib function.
This cleans up the target api function.
Task #7807 (https://gna.org/task/index.php?7807): Speed-up of
Author: tlinnet
Date: Wed Jun 18 17:12:50 2014
New Revision: 24104
URL: http://svn.gna.org/viewcvs/relax?rev=24104view=rev
Log:
Copied profiling script for DPL94 to TAP03.
Added:
branches/disp_spin_speed/test_suite/shared_data/dispersion/profiling/profiling_tap03.py
- copied
Author: tlinnet
Date: Wed Jun 18 17:13:47 2014
New Revision: 24105
URL: http://svn.gna.org/viewcvs/relax?rev=24105view=rev
Log:
Copied profiling script for DPL94 to TP02.
Added:
branches/disp_spin_speed/test_suite/shared_data/dispersion/profiling/profiling_tp02.py
- copied unchanged
Author: tlinnet
Date: Wed Jun 18 17:15:27 2014
New Revision: 24106
URL: http://svn.gna.org/viewcvs/relax?rev=24106view=rev
Log:
Copied profiling script for DPL94 to MP05.
Added:
branches/disp_spin_speed/test_suite/shared_data/dispersion/profiling/profiling_mp05.py
- copied unchanged
Author: tlinnet
Date: Wed Jun 18 17:16:24 2014
New Revision: 24107
URL: http://svn.gna.org/viewcvs/relax?rev=24107view=rev
Log:
Copied profiling script for DPL94 to M61.
Added:
branches/disp_spin_speed/test_suite/shared_data/dispersion/profiling/profiling_m61.py
- copied unchanged
Author: tlinnet
Date: Wed Jun 18 17:21:39 2014
New Revision: 24108
URL: http://svn.gna.org/viewcvs/relax?rev=24108view=rev
Log:
Modified profiling script for TAP03 to be used.
Task #7807 (https://gna.org/task/index.php?7807): Speed-up of dispersion models
for Clustered analysis.
Modified:
Author: tlinnet
Date: Wed Jun 18 17:23:44 2014
New Revision: 24109
URL: http://svn.gna.org/viewcvs/relax?rev=24109view=rev
Log:
Modified profiling script for TP02, to be used.
Task #7807 (https://gna.org/task/index.php?7807): Speed-up of dispersion models
for Clustered analysis.
Modified:
Author: tlinnet
Date: Wed Jun 18 17:27:54 2014
New Revision: 24110
URL: http://svn.gna.org/viewcvs/relax?rev=24110view=rev
Log:
Modified profiling script for MP05.
Task #7807 (https://gna.org/task/index.php?7807): Speed-up of dispersion models
for Clustered analysis.
Modified:
Author: tlinnet
Date: Wed Jun 18 17:31:55 2014
New Revision: 24111
URL: http://svn.gna.org/viewcvs/relax?rev=24111view=rev
Log:
Modified profiling script for M61.
This is the last one.
Task #7807 (https://gna.org/task/index.php?7807): Speed-up of dispersion models
for Clustered analysis.
Author: bugman
Date: Wed Jun 18 17:38:42 2014
New Revision: 24112
URL: http://svn.gna.org/viewcvs/relax?rev=24112view=rev
Log:
Expansion of the disp_profile_all.py dispersion model super profiling scripts.
The newly added profiling scripts for models 'M61', 'TP02', 'TAP03', and 'MP05'
are now
Author: tlinnet
Date: Wed Jun 18 17:39:08 2014
New Revision: 24113
URL: http://svn.gna.org/viewcvs/relax?rev=24113view=rev
Log:
Moved the parameter conversion of MMQ CR72 into lib function.
Task #7807 (https://gna.org/task/index.php?7807): Speed-up of dispersion models
for Clustered analysis.
Author: tlinnet
Date: Wed Jun 18 17:52:07 2014
New Revision: 24114
URL: http://svn.gna.org/viewcvs/relax?rev=24114view=rev
Log:
Moved the paramter conversions of k_AB, k_BA and pB into lib function of NS MMQ
2site.
Task #7807 (https://gna.org/task/index.php?7807): Speed-up of dispersion models
Author: tlinnet
Date: Wed Jun 18 17:57:44 2014
New Revision: 24115
URL: http://svn.gna.org/viewcvs/relax?rev=24115view=rev
Log:
Moved the parameter conversion from target function to lib function for NS
r1rho 2site.
Task #7807 (https://gna.org/task/index.php?7807): Speed-up of dispersion models
Author: bugman
Date: Wed Jun 18 18:04:44 2014
New Revision: 24116
URL: http://svn.gna.org/viewcvs/relax?rev=24116view=rev
Log:
Updated the dispersion model speed statistics for the disp_spin_speed branch
vs. relax-3.2.2.
This now includes the 'NS CPMG 2-site 3D', 'DPL94', and 'NS R1rho 2-site'
Author: bugman
Date: Wed Jun 18 18:22:56 2014
New Revision: 24117
URL: http://svn.gna.org/viewcvs/relax?rev=24117view=rev
Log:
Alignment improvements for the final printout from the dispersion model super
profiling script.
The log file has been updated with what the new formatting will look
Author: bugman
Date: Wed Jun 18 18:34:54 2014
New Revision: 24118
URL: http://svn.gna.org/viewcvs/relax?rev=24118view=rev
Log:
Updated the model names in the dispersion model super profiling script.
The 'CR72', 'B14' and 'NS CPMG 2-site 3D' models are the full, slower versions
rather than the
Author: tlinnet
Date: Wed Jun 18 18:52:37 2014
New Revision: 24119
URL: http://svn.gna.org/viewcvs/relax?rev=24119view=rev
Log:
Moved the parameter conversion for ns mmq 3site into lib function.
Task #7807 (https://gna.org/task/index.php?7807): Speed-up of dispersion models
for Clustered
Author: bugman
Date: Wed Jun 18 18:54:41 2014
New Revision: 24120
URL: http://svn.gna.org/viewcvs/relax?rev=24120view=rev
Log:
Updated the dispersion model profiling comparison of the disp_spin_speed branch
vs. relax-3.2.2.
The 'M61', 'TP02', 'TAP03', and 'MP05' models are now included. The
Author: tlinnet
Date: Wed Jun 18 19:01:24 2014
New Revision: 24121
URL: http://svn.gna.org/viewcvs/relax?rev=24121view=rev
Log:
Moved the parameter conversion for r1rho 3site into lib function.
Task #7807 (https://gna.org/task/index.php?7807): Speed-up of dispersion models
for Clustered
Author: tlinnet
Date: Wed Jun 18 19:03:08 2014
New Revision: 24122
URL: http://svn.gna.org/viewcvs/relax?rev=24122view=rev
Log:
Copied profiling script for CR72, so there is now a normal and a full version.
Added:
Author: tlinnet
Date: Wed Jun 18 19:04:01 2014
New Revision: 24123
URL: http://svn.gna.org/viewcvs/relax?rev=24123view=rev
Log:
Copied profiling for b14 to normal and full model.
Added:
branches/disp_spin_speed/test_suite/shared_data/dispersion/profiling/profiling_b14.py
- copied
Author: bugman
Date: Wed Jun 18 19:08:51 2014
New Revision: 24124
URL: http://svn.gna.org/viewcvs/relax?rev=24124view=rev
Log:
Created a text file suitable for use as part of the relax release notes.
This contains the statistically averaged profiling information of the speed of
the dispersion
Author: tlinnet
Date: Wed Jun 18 19:10:13 2014
New Revision: 24125
URL: http://svn.gna.org/viewcvs/relax?rev=24125view=rev
Log:
Copied profiling script for cpmg 3D.
Added:
branches/disp_spin_speed/test_suite/shared_data/dispersion/profiling/profiling_ns_cpmg_2site_3D.py
- copied
Author: tlinnet
Date: Wed Jun 18 19:11:10 2014
New Revision: 24126
URL: http://svn.gna.org/viewcvs/relax?rev=24126view=rev
Log:
Copied profiling script for ns cpmg star.
Added:
branches/disp_spin_speed/test_suite/shared_data/dispersion/profiling/profiling_ns_cpmg_2site_star.py
-
Author: tlinnet
Date: Wed Jun 18 19:12:12 2014
New Revision: 24127
URL: http://svn.gna.org/viewcvs/relax?rev=24127view=rev
Log:
copied profiling script for no rex.
Added:
branches/disp_spin_speed/test_suite/shared_data/dispersion/profiling/profiling_norex.py
- copied unchanged from
Author: tlinnet
Date: Wed Jun 18 19:15:19 2014
New Revision: 24128
URL: http://svn.gna.org/viewcvs/relax?rev=24128view=rev
Log:
Modified profiling script for B14, to R20A=R20B.
Task #7807 (https://gna.org/task/index.php?7807): Speed-up of dispersion models
for Clustered analysis.
Modified:
Author: tlinnet
Date: Wed Jun 18 19:20:19 2014
New Revision: 24129
URL: http://svn.gna.org/viewcvs/relax?rev=24129view=rev
Log:
Removal of junk, and replacing func.
Task #7807 (https://gna.org/task/index.php?7807): Speed-up of dispersion models
for Clustered analysis.
Modified:
Author: tlinnet
Date: Wed Jun 18 19:20:21 2014
New Revision: 24130
URL: http://svn.gna.org/viewcvs/relax?rev=24130view=rev
Log:
Removal of junk from profiling script.
Task #7807 (https://gna.org/task/index.php?7807): Speed-up of dispersion models
for Clustered analysis.
Modified:
Author: tlinnet
Date: Wed Jun 18 19:25:31 2014
New Revision: 24132
URL: http://svn.gna.org/viewcvs/relax?rev=24132view=rev
Log:
Removal of junk from profiling script CR72 and making it work.
Task #7807 (https://gna.org/task/index.php?7807): Speed-up of dispersion models
for Clustered analysis.
Author: tlinnet
Date: Wed Jun 18 19:25:29 2014
New Revision: 24131
URL: http://svn.gna.org/viewcvs/relax?rev=24131view=rev
Log:
Removal of junk for profiling script CR72 full.
Task #7807 (https://gna.org/task/index.php?7807): Speed-up of dispersion models
for Clustered analysis.
Modified:
Author: tlinnet
Date: Wed Jun 18 19:29:28 2014
New Revision: 24133
URL: http://svn.gna.org/viewcvs/relax?rev=24133view=rev
Log:
Removal of junk, and implementing NO REX profiling script.
Task #7807 (https://gna.org/task/index.php?7807): Speed-up of dispersion models
for Clustered analysis.
Author: tlinnet
Date: Wed Jun 18 19:32:18 2014
New Revision: 24134
URL: http://svn.gna.org/viewcvs/relax?rev=24134view=rev
Log:
Implemented profiling script for NS CPMG 2site 3D.
Task #7807 (https://gna.org/task/index.php?7807): Speed-up of dispersion models
for Clustered analysis.
Modified:
Author: tlinnet
Date: Wed Jun 18 19:36:48 2014
New Revision: 24135
URL: http://svn.gna.org/viewcvs/relax?rev=24135view=rev
Log:
Implemented profiling script for NS CPMG STAR and STAR FULL.
Task #7807 (https://gna.org/task/index.php?7807): Speed-up of dispersion models
for Clustered analysis.
Author: tlinnet
Date: Wed Jun 18 19:39:44 2014
New Revision: 24136
URL: http://svn.gna.org/viewcvs/relax?rev=24136view=rev
Log:
Copied profiling script to be used for LM63.
Added:
branches/disp_spin_speed/test_suite/shared_data/dispersion/profiling/profiling_lm63.py
- copied unchanged
Author: tlinnet
Date: Wed Jun 18 19:41:27 2014
New Revision: 24137
URL: http://svn.gna.org/viewcvs/relax?rev=24137view=rev
Log:
Copied profiling script to model IT99.
Added:
branches/disp_spin_speed/test_suite/shared_data/dispersion/profiling/profiling_it99.py
- copied unchanged from
Author: tlinnet
Date: Wed Jun 18 20:02:00 2014
New Revision: 24138
URL: http://svn.gna.org/viewcvs/relax?rev=24138view=rev
Log:
Fixed the packing out of paramter tex for global analysis in model IT99.
bug #0(https://gna.org/bugs/index.php?0): Unpacking of parameters for
global analysis
Author: tlinnet
Date: Wed Jun 18 20:03:09 2014
New Revision: 24139
URL: http://svn.gna.org/viewcvs/relax?rev=24139view=rev
Log:
Merged revisions 24138 via svnmerge from
svn+ssh://tlin...@svn.gna.org/svn/relax/trunk
r24138 | tlinnet | 2014-06-18 20:02:00 +0200 (Wed, 18 Jun 2014) | 3
Author: tlinnet
Date: Wed Jun 18 20:17:29 2014
New Revision: 24141
URL: http://svn.gna.org/viewcvs/relax?rev=24141view=rev
Log:
Implemented profiling script for LM63.
Task #7807 (https://gna.org/task/index.php?7807): Speed-up of dispersion models
for Clustered analysis.
Modified:
Author: tlinnet
Date: Wed Jun 18 20:17:26 2014
New Revision: 24140
URL: http://svn.gna.org/viewcvs/relax?rev=24140view=rev
Log:
Added profiling script for IT99.
Task #7807 (https://gna.org/task/index.php?7807): Speed-up of dispersion models
for Clustered analysis.
Modified:
Author: tlinnet
Date: Wed Jun 18 20:22:02 2014
New Revision: 24142
URL: http://svn.gna.org/viewcvs/relax?rev=24142view=rev
Log:
Moved the eta_scale = 2.0**(-3.0/2.0) out of lib function for mmq cr72, since
this is only needs to be computed once.
Task #7807 (https://gna.org/task/index.php?7807):
Author: tlinnet
Date: Wed Jun 18 20:23:51 2014
New Revision: 24143
URL: http://svn.gna.org/viewcvs/relax?rev=24143view=rev
Log:
Spell fix in code for ns cpmg 2site expanded.
Task #7807 (https://gna.org/task/index.php?7807): Speed-up of dispersion models
for Clustered analysis.
Modified:
Author: tlinnet
Date: Wed Jun 18 20:28:05 2014
New Revision: 24144
URL: http://svn.gna.org/viewcvs/relax?rev=24144view=rev
Log:
Fix for missing comments.
Task #7807 (https://gna.org/task/index.php?7807): Speed-up of dispersion models
for Clustered analysis.
Modified:
Author: tlinnet
Date: Wed Jun 18 20:32:40 2014
New Revision: 24145
URL: http://svn.gna.org/viewcvs/relax?rev=24145view=rev
Log:
Fix for spaces aroung = outside functions.
Task #7807 (https://gna.org/task/index.php?7807): Speed-up of dispersion models
for Clustered analysis.
Modified:
Author: tlinnet
Date: Wed Jun 18 20:41:35 2014
New Revision: 24146
URL: http://svn.gna.org/viewcvs/relax?rev=24146view=rev
Log:
Critical fix for wrong space inserted in ns mmq 3site mq.
Task #7807 (https://gna.org/task/index.php?7807): Speed-up of dispersion models
for Clustered analysis.
Author: tlinnet
Date: Wed Jun 18 20:41:37 2014
New Revision: 24147
URL: http://svn.gna.org/viewcvs/relax?rev=24147view=rev
Log:
Fixed the input for unit test of mmq cr72.
The number of input parameters has been lowered.
Task #7807 (https://gna.org/task/index.php?7807): Speed-up of dispersion
Author: tlinnet
Date: Wed Jun 18 20:50:32 2014
New Revision: 24148
URL: http://svn.gna.org/viewcvs/relax?rev=24148view=rev
Log:
Added additional math domain checking in B14.
This is when v1c is less than 1.0.
Task #7807 (https://gna.org/task/index.php?7807): Speed-up of dispersion models
for
Author: tlinnet
Date: Wed Jun 18 20:58:39 2014
New Revision: 24149
URL: http://svn.gna.org/viewcvs/relax?rev=24149view=rev
Log:
Comment fixing, for explaining the masking and replacing when dw is zeroÃ.
Task #7807 (https://gna.org/task/index.php?7807): Speed-up of dispersion models
for
Author: tlinnet
Date: Wed Jun 18 21:02:57 2014
New Revision: 24150
URL: http://svn.gna.org/viewcvs/relax?rev=24150view=rev
Log:
Copied profiling script to be used for profiling the use of higher dimensional
data for the numpy eig function.
Added:
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