Author: tlinnet
Date: Mon Oct 3 20:11:31 2016
New Revision: 28258
URL: http://svn.gna.org/viewcvs/relax?rev=28258=rev
Log:
Try to make the script for TCSH and openmpi working on all
versions of TCSH.
Modified:
trunk/devel_scripts/openmpi_test_install_tcsh.sh
Modified: trunk/devel_scripts
Author: tlinnet
Date: Mon Oct 3 18:43:39 2016
New Revision: 28257
URL: http://svn.gna.org/viewcvs/relax?rev=28257=rev
Log:
Adding shebang lines.
Modified:
trunk/devel_scripts/openmpi_test_install_bash.sh
trunk/devel_scripts/openmpi_test_install_tcsh.sh
Modified: trunk/devel_scripts
Author: tlinnet
Date: Mon Oct 3 18:22:04 2016
New Revision: 28256
URL: http://svn.gna.org/viewcvs/relax?rev=28256=rev
Log:
Scons on Centos findst python2.6 instead of python2.7
Modified:
trunk/devel_scripts/deploy_scripts/deploy_google_computing_centos_6_86_x64_upgrade_python.sh
Modified
Author: tlinnet
Date: Mon Oct 3 18:06:13 2016
New Revision: 28255
URL: http://svn.gna.org/viewcvs/relax?rev=28255=rev
Log:
Made a deployment script for centos 6.
Added:
trunk/devel_scripts/deploy_scripts/deploy_google_computing_centos_6_86_x64_upgrade_python.sh
- copied, changed from
Author: tlinnet
Date: Mon Oct 3 17:50:34 2016
New Revision: 28254
URL: http://svn.gna.org/viewcvs/relax?rev=28254=rev
Log:
Back to function in bash script for openmpi.
Modified:
trunk/devel_scripts/openmpi_test_install_bash.sh
Modified: trunk/devel_scripts/openmpi_test_install_bash.sh
URL
Author: tlinnet
Date: Mon Oct 3 17:43:55 2016
New Revision: 28253
URL: http://svn.gna.org/viewcvs/relax?rev=28253=rev
Log:
Small change to test openmpi script for bash
Modified:
trunk/devel_scripts/openmpi_test_install_bash.sh
Modified: trunk/devel_scripts/openmpi_test_install_bash.sh
URL
Author: tlinnet
Date: Mon Oct 3 17:23:41 2016
New Revision: 28252
URL: http://svn.gna.org/viewcvs/relax?rev=28252=rev
Log:
Last changes to testing of openmpi.
Modified:
trunk/devel_scripts/openmpi_test_install_bash.sh
trunk/devel_scripts/openmpi_test_install_tcsh.sh
Modified: trunk
Author: tlinnet
Date: Mon Oct 3 17:18:04 2016
New Revision: 28251
URL: http://svn.gna.org/viewcvs/relax?rev=28251=rev
Log:
Change to bash openmpi test script.
Modified:
trunk/devel_scripts/openmpi_test_install_bash.sh
Modified: trunk/devel_scripts/openmpi_test_install_bash.sh
URL:
http
Author: tlinnet
Date: Mon Oct 3 17:12:03 2016
New Revision: 28250
URL: http://svn.gna.org/viewcvs/relax?rev=28250=rev
Log:
Altering test openmpi script to an alias function.
Modified:
trunk/devel_scripts/openmpi_test_install_bash.sh
trunk/devel_scripts/openmpi_test_install_tcsh.sh
Author: tlinnet
Date: Mon Oct 3 17:08:20 2016
New Revision: 28249
URL: http://svn.gna.org/viewcvs/relax?rev=28249=rev
Log:
Changed more to openmpi script.
Modified:
trunk/devel_scripts/deploy_scripts/deploy_google_computing_redhat_6_86_x64_upgrade_python.sh
trunk/devel_scripts
Author: tlinnet
Date: Mon Oct 3 13:46:29 2016
New Revision: 28248
URL: http://svn.gna.org/viewcvs/relax?rev=28248=rev
Log:
Again small changes to deployment scripts.
Modified:
trunk/devel_scripts/deploy_scripts/deploy_google_computing_redhat_6_86_x64.sh
trunk/devel_scripts
Author: tlinnet
Date: Mon Oct 3 12:58:32 2016
New Revision: 28247
URL: http://svn.gna.org/viewcvs/relax?rev=28247=rev
Log:
Made a copy of openmpi test script for TCSH shell.
Added:
trunk/devel_scripts/openmpi_test_install_tcsh.sh
- copied unchanged from r28246,
trunk/devel_scripts
Author: tlinnet
Date: Mon Oct 3 12:58:03 2016
New Revision: 28246
URL: http://svn.gna.org/viewcvs/relax?rev=28246=rev
Log:
Moving test script of openmpi to bash version.
Added:
trunk/devel_scripts/openmpi_test_install_bash.sh
- copied unchanged from r28245,
trunk/devel_scripts
Author: tlinnet
Date: Mon Oct 3 12:56:19 2016
New Revision: 28245
URL: http://svn.gna.org/viewcvs/relax?rev=28245=rev
Log:
More changing to deployment scripts.
Added:
trunk/devel_scripts/deploy_scripts/deploy_google_computing_redhat_7_86_x64.sh
- copied, changed from r28240,
trunk
Author: tlinnet
Date: Mon Oct 3 10:36:47 2016
New Revision: 28244
URL: http://svn.gna.org/viewcvs/relax?rev=28244=rev
Log:
Small change to deploy script to build wxPython.
Modified:
trunk/devel_scripts/deploy_scripts/deploy_google_computing_redhat_6_86_x64_upgrade_python.sh
Modified
Author: tlinnet
Date: Mon Oct 3 01:11:19 2016
New Revision: 28243
URL: http://svn.gna.org/viewcvs/relax?rev=28243=rev
Log:
More changing to deploy scripts.
Modified:
trunk/devel_scripts/deploy_scripts/deploy_google_computing_redhat_6_86_x64_upgrade_python.sh
trunk/devel_scripts
Author: tlinnet
Date: Sun Oct 2 23:51:49 2016
New Revision: 28242
URL: http://svn.gna.org/viewcvs/relax?rev=28242=rev
Log:
Adding installation of matlotlib to Redhat 6, python 2.7.
Modified:
trunk/devel_scripts/deploy_scripts/deploy_google_computing_redhat_6_86_x64_upgrade_python.sh
Author: tlinnet
Date: Sun Oct 2 23:23:49 2016
New Revision: 28241
URL: http://svn.gna.org/viewcvs/relax?rev=28241=rev
Log:
Change to pip install command, to source python first.
Modified:
trunk/devel_scripts/deploy_scripts/deploy_google_computing_redhat_6_86_x64_upgrade_python.sh
Modified
Author: tlinnet
Date: Sun Oct 2 23:13:08 2016
New Revision: 28240
URL: http://svn.gna.org/viewcvs/relax?rev=28240=rev
Log:
Adding scripts to test openmpi installation and deploy in redhat.
Modified:
trunk/devel_scripts/deploy_scripts/deploy_google_computing_redhat_6_86_x64.sh
trunk
Author: tlinnet
Date: Sat Oct 1 10:05:59 2016
New Revision: 28239
URL: http://svn.gna.org/viewcvs/relax?rev=28239=rev
Log:
Small changes to the deploy scripts.
Modified:
trunk/devel_scripts/deploy_scripts/deploy_google_computing_redhat_6_86_x64.sh
trunk/devel_scripts/deploy_scripts
Author: tlinnet
Date: Sat Oct 1 09:56:56 2016
New Revision: 28238
URL: http://svn.gna.org/viewcvs/relax?rev=28238=rev
Log:
Renamed the ubuntu deploy script.
Added:
trunk/devel_scripts/deploy_scripts/deploy_google_computing_ubuntu_14-04_86_x64.sh
- copied unchanged from r28237,
trunk
Author: tlinnet
Date: Sat Oct 1 09:52:33 2016
New Revision: 28237
URL: http://svn.gna.org/viewcvs/relax?rev=28237=rev
Log:
Moved deploy scripts.
There would probably have to be a deploy script for each system.
Added:
trunk/devel_scripts/deploy_scripts/
trunk/devel_scripts
Author: tlinnet
Date: Sat Oct 1 09:49:01 2016
New Revision: 28236
URL: http://svn.gna.org/viewcvs/relax?rev=28236=rev
Log:
Making a Redhat 6 deploy script, which will upgrade python from 2.6 to 2.7
The normal installation through yum will have python 2.6 and only numpy 2.4.
This is not good
Author: tlinnet
Date: Sat Oct 1 01:29:56 2016
New Revision: 28235
URL: http://svn.gna.org/viewcvs/relax?rev=28235=rev
Log:
Small change to the openmpi test script.
Modified:
trunk/devel_scripts/openmpi_test_install.sh
Modified: trunk/devel_scripts/openmpi_test_install.sh
URL:
http
Author: tlinnet
Date: Sat Oct 1 01:21:30 2016
New Revision: 28234
URL: http://svn.gna.org/viewcvs/relax?rev=28234=rev
Log:
Added initial script for testing openmpi.
Added:
trunk/devel_scripts/openmpi_test_install.sh
Modified:
trunk/devel_scripts/deploy_google_computing_redhat_6_86_x64
Author: tlinnet
Date: Sat Oct 1 00:59:50 2016
New Revision: 28233
URL: http://svn.gna.org/viewcvs/relax?rev=28233=rev
Log:
Make new filename for script.
Added:
trunk/devel_scripts/deploy_google_computing_redhat_6_86_x64.sh
- copied unchanged from r28232,
trunk/devel_scripts
Author: tlinnet
Date: Sat Oct 1 00:58:31 2016
New Revision: 28232
URL: http://svn.gna.org/viewcvs/relax?rev=28232=rev
Log:
Adding deploy script for rhel-6.
Modified:
trunk/devel_scripts/deploy_google_computing_redhat.sh
Modified: trunk/devel_scripts/deploy_google_computing_redhat.sh
URL
Author: tlinnet
Date: Sat Oct 1 00:24:20 2016
New Revision: 28231
URL: http://svn.gna.org/viewcvs/relax?rev=28231=rev
Log:
Made small change to variable printout.
Modified:
trunk/devel_scripts/deploy_google_computing_ubuntu.sh
Modified: trunk/devel_scripts
Author: tlinnet
Date: Fri Sep 30 22:25:26 2016
New Revision: 28230
URL: http://svn.gna.org/viewcvs/relax?rev=28230=rev
Log:
Moving fedora to redhat.
Google Cloud does not offer fedora images.
Added:
trunk/devel_scripts/deploy_google_computing_redhat.sh
- copied unchanged from r28229
Author: tlinnet
Date: Fri Sep 30 22:02:31 2016
New Revision: 28229
URL: http://svn.gna.org/viewcvs/relax?rev=28229=rev
Log:
Copying deployment script of Ubunto to a Fedora version.
This is a response to bug 25084 (https://gna.org/bugs/?25084).
Added:
trunk/devel_scripts
Author: tlinnet
Date: Sat Apr 2 22:45:58 2016
New Revision: 28199
URL: http://svn.gna.org/viewcvs/relax?rev=28199=rev
Log:
When the userfunction script() is called, a notification of pipe_alteration is
made.
This will force the GUI to update, and make sure that it is up to-date.
Modified
Author: tlinnet
Date: Sat Apr 2 22:10:15 2016
New Revision: 28198
URL: http://svn.gna.org/viewcvs/relax?rev=28198=rev
Log:
Optimising the width of the statusbar.
Modified:
trunk/gui/relax_gui.py
Modified: trunk/gui/relax_gui.py
URL:
http://svn.gna.org/viewcvs/relax/trunk/gui/relax_gui.py
Author: tlinnet
Date: Sat Apr 2 21:44:08 2016
New Revision: 28197
URL: http://svn.gna.org/viewcvs/relax?rev=28197=rev
Log:
Added a newline character after printing the script.
Modified:
trunk/prompt/interpreter.py
Modified: trunk/prompt/interpreter.py
URL:
http://svn.gna.org/viewcvs/relax
Author: tlinnet
Date: Sat Apr 2 21:41:55 2016
New Revision: 28196
URL: http://svn.gna.org/viewcvs/relax?rev=28196=rev
Log:
Fix for GUI prompt bug, where ansi escape characters should not be printed when
interpreter is inhereted from wxPython.
Modified:
trunk/prompt/interpreter.py
Modified
Author: tlinnet
Date: Sat Apr 2 18:59:24 2016
New Revision: 28195
URL: http://svn.gna.org/viewcvs/relax?rev=28195=rev
Log:
Changin the Keyboard shortcut for Changing the working directory to Ctrl+W.
Since Ctrl+C is often used for copying (from the terminal).
Modified:
trunk/gui/menu.py
Author: tlinnet
Date: Sat Apr 2 18:45:01 2016
New Revision: 28194
URL: http://svn.gna.org/viewcvs/relax?rev=28194=rev
Log:
For the 4 autoanalysis methods, the default results directory is now the
current working directory instead of the lauch directory.
gui/analyses/auto_model_free.py
gui
Author: tlinnet
Date: Sat Apr 2 18:08:40 2016
New Revision: 28193
URL: http://svn.gna.org/viewcvs/relax?rev=28193=rev
Log:
Updating the self.system_cwd_path when a directory change is observed.
Modified:
trunk/gui/relax_gui.py
Modified: trunk/gui/relax_gui.py
URL:
http://svn.gna.org
Author: tlinnet
Date: Sat Apr 2 17:44:49 2016
New Revision: 28192
URL: http://svn.gna.org/viewcvs/relax?rev=28192=rev
Log:
Letting the current working directory be printed in the statusbar in the bottom.
Modified:
trunk/gui/relax_gui.py
Modified: trunk/gui/relax_gui.py
URL:
http
Author: tlinnet
Date: Sat Apr 2 17:42:55 2016
New Revision: 28191
URL: http://svn.gna.org/viewcvs/relax?rev=28191=rev
Log:
Letting the lib.system.cd function notify the observer, when chanding directory.
Modified:
trunk/lib/system.py
Modified: trunk/lib/system.py
URL:
http://svn.gna.org
Author: tlinnet
Date: Sat Apr 2 17:41:30 2016
New Revision: 28190
URL: http://svn.gna.org/viewcvs/relax?rev=28190=rev
Log:
Modifying the userfunction system.cd() not to show the result to STDOUT.
Modified:
trunk/user_functions/sys_info.py
Modified: trunk/user_functions/sys_info.py
URL
Author: tlinnet
Date: Sat Apr 2 17:39:54 2016
New Revision: 28189
URL: http://svn.gna.org/viewcvs/relax?rev=28189=rev
Log:
Adding an observer for current working directory.
Modified:
trunk/status.py
Modified: trunk/status.py
URL:
http://svn.gna.org/viewcvs/relax/trunk/status.py?rev=28189
Author: tlinnet
Date: Sat Apr 2 17:07:50 2016
New Revision: 28188
URL: http://svn.gna.org/viewcvs/relax?rev=28188=rev
Log:
Changing to a filedialog for the userfunction system.cd()
Modified:
trunk/user_functions/sys_info.py
Modified: trunk/user_functions/sys_info.py
URL:
http
Author: tlinnet
Date: Sat Apr 2 17:05:45 2016
New Revision: 28187
URL: http://svn.gna.org/viewcvs/relax?rev=28187=rev
Log:
Adding af verbose flag to lib.system.pwd() function.
Modified:
trunk/lib/system.py
Modified: trunk/lib/system.py
URL:
http://svn.gna.org/viewcvs/relax/trunk/lib
Author: tlinnet
Date: Sat Apr 2 16:13:31 2016
New Revision: 28186
URL: http://svn.gna.org/viewcvs/relax?rev=28186=rev
Log:
Adding a toolbar button for changing the current working direxctory.
Modified:
trunk/gui/relax_gui.py
Modified: trunk/gui/relax_gui.py
URL:
http://svn.gna.org/viewcvs
Author: tlinnet
Date: Sat Apr 2 16:02:32 2016
New Revision: 28185
URL: http://svn.gna.org/viewcvs/relax?rev=28185=rev
Log:
Storing the current working directory as a GUI variable.
Modified:
trunk/gui/relax_gui.py
Modified: trunk/gui/relax_gui.py
URL:
http://svn.gna.org/viewcvs/relax/trunk
Author: tlinnet
Date: Sat Apr 2 15:59:42 2016
New Revision: 28184
URL: http://svn.gna.org/viewcvs/relax?rev=28184=rev
Log:
Adding a verbose True/False for the lib.system.pwd() function.
Modified:
trunk/lib/system.py
Modified: trunk/lib/system.py
URL:
http://svn.gna.org/viewcvs/relax
Author: tlinnet
Date: Sat Apr 2 15:47:19 2016
New Revision: 28183
URL: http://svn.gna.org/viewcvs/relax?rev=28183=rev
Log:
Adding a menu item for changing the current working directory.
Modified:
trunk/gui/menu.py
Modified: trunk/gui/menu.py
URL:
http://svn.gna.org/viewcvs/relax/trunk/gui
Author: tlinnet
Date: Sat Apr 2 15:46:09 2016
New Revision: 28182
URL: http://svn.gna.org/viewcvs/relax?rev=28182=rev
Log:
Adding a relax gui menu for changing the current working directory.
Modified:
trunk/gui/relax_gui.py
Modified: trunk/gui/relax_gui.py
URL:
http://svn.gna.org/viewcvs
Author: tlinnet
Date: Sat Apr 2 14:16:24 2016
New Revision: 28181
URL: http://svn.gna.org/viewcvs/relax?rev=28181=rev
Log:
Adding new 16x16 px and 200px of the oxygen icon folder-development.
This icon is used for displaying the current working directory.
Added:
trunk/graphics
Author: tlinnet
Date: Sat Apr 2 14:14:01 2016
New Revision: 28180
URL: http://svn.gna.org/viewcvs/relax?rev=28180=rev
Log:
Adding a new user function sys,tem.pwd() to print/display the current working
directory.
Modified:
trunk/user_functions/sys_info.py
Modified: trunk/user_functions
Author: tlinnet
Date: Sat Apr 2 14:12:25 2016
New Revision: 28179
URL: http://svn.gna.org/viewcvs/relax?rev=28179=rev
Log:
Adding a new lib.system,.pwd() function, to print and return the current
working directory.
Modified:
trunk/lib/system.py
Modified: trunk/lib/system.py
URL:
http
Author: tlinnet
Date: Sat Apr 2 13:49:45 2016
New Revision: 28178
URL: http://svn.gna.org/viewcvs/relax?rev=28178=rev
Log:
Adding a userfunction translation for:
'sys_info': 'system.sys_info',
'time': 'system.time'
This is to cathc the new naming of these functions.
Modified:
trunk
Author: tlinnet
Date: Sat Apr 2 13:41:22 2016
New Revision: 28177
URL: http://svn.gna.org/viewcvs/relax?rev=28177=rev
Log:
Adding a new 200px of oxygen folder-favorites icon. This is to be used in the
wizard image.
Added:
trunk/graphics/oxygen_icons/200x/places/
trunk/graphics
Author: tlinnet
Date: Sat Apr 2 13:40:03 2016
New Revision: 28176
URL: http://svn.gna.org/viewcvs/relax?rev=28176=rev
Log:
Adding the new user function: system.cd(path).
This is to change the current working dirextory.
Modified:
trunk/user_functions/sys_info.py
Modified: trunk
Author: tlinnet
Date: Sat Apr 2 13:35:18 2016
New Revision: 28175
URL: http://svn.gna.org/viewcvs/relax?rev=28175=rev
Log:
Adding a new graphics variable: WIZARD_OXYGEN_PATH, to use oxygen icons with
size of 200px.
Modified:
trunk/graphics/__init__.py
Modified: trunk/graphics/__init__.py
Author: tlinnet
Date: Sat Apr 2 13:34:30 2016
New Revision: 28174
URL: http://svn.gna.org/viewcvs/relax?rev=28174=rev
Log:
Deleting the old folder-favorites icon.
Removed:
trunk/graphics/oxygen_icons/16x16/places/folder-favorites-icon.png
Removed: trunk/graphics/oxygen_icons/16x16/places
Author: tlinnet
Date: Sat Apr 2 13:31:47 2016
New Revision: 28173
URL: http://svn.gna.org/viewcvs/relax?rev=28173=rev
Log:
Renaming the folder-favorites icon.
Added:
trunk/graphics/oxygen_icons/16x16/places/folder-favorites.png
- copied unchanged from r28170,
trunk/graphics
Author: tlinnet
Date: Sat Apr 2 12:53:23 2016
New Revision: 28172
URL: http://svn.gna.org/viewcvs/relax?rev=28172=rev
Log:
In /lib/__init__.py, adding the filename for system.py.
Modified:
trunk/lib/__init__.py
Modified: trunk/lib/__init__.py
URL:
http://svn.gna.org/viewcvs/relax/trunk
Author: tlinnet
Date: Sat Apr 2 12:52:04 2016
New Revision: 28171
URL: http://svn.gna.org/viewcvs/relax?rev=28171=rev
Log:
Adding a new file at lib/system.py.
This file will contain different functions related to python os and system
related functions.
For example changing directory
Author: tlinnet
Date: Sat Apr 2 12:47:47 2016
New Revision: 28170
URL: http://svn.gna.org/viewcvs/relax?rev=28170=rev
Log:
Added a new 16x16 icon for the oxygen folder-favorites icon.
Added:
trunk/graphics/oxygen_icons/16x16/places/
trunk/graphics/oxygen_icons/16x16/places/folder
Author: tlinnet
Date: Sat Apr 2 12:44:15 2016
New Revision: 28169
URL: http://svn.gna.org/viewcvs/relax?rev=28169=rev
Log:
Reverted r28168 - Too much was committed at the same time.
The command used was:
svn merge -r28168:28167 .
Removed:
trunk/graphics/oxygen_icons/16x16/places/
Modified
Author: tlinnet
Date: Sat Apr 2 12:38:41 2016
New Revision: 28168
URL: http://svn.gna.org/viewcvs/relax?rev=28168=rev
Log:
Added a new 16x16 icon for the oxygen folder-favorites icon.
Added:
trunk/graphics/oxygen_icons/16x16/places/
trunk/graphics/oxygen_icons/16x16/places/folder
Author: tlinnet
Date: Sat Apr 2 11:36:00 2016
New Revision: 28167
URL: http://svn.gna.org/viewcvs/relax?rev=28167=rev
Log:
In the GUI the userfunctions sys_info() and time() are now grouped into a
"system" subclass.
This is to prepare for other system related functions.
Modified:
Author: tlinnet
Date: Sat Nov 28 11:57:41 2015
New Revision: 28120
URL: http://svn.gna.org/viewcvs/relax?rev=28120=rev
Log:
Fix for running relax at a server with no graphical display and using
matplotlib.
The error was found by:
relax_trunk --time -s Relax_disp.test_repeat_cpmg -d
Author: tlinnet
Date: Sat Nov 28 12:10:18 2015
New Revision: 28121
URL: http://svn.gna.org/viewcvs/relax?rev=28121=rev
Log:
Removing lines with spaces in it.
Modified:
trunk/test_suite/system_tests/relax_disp.py
Modified: trunk/test_suite/system_tests/relax_disp.py
URL:
http://svn.gna.org
Author: tlinnet
Date: Sat Nov 28 22:55:26 2015
New Revision: 28126
URL: http://svn.gna.org/viewcvs/relax?rev=28126=rev
Log:
Splitting deploy script into several small functions.
Modified:
trunk/devel_scripts/deploy_google_computing_ubuntu.sh
Modified: trunk/devel_scripts
Author: tlinnet
Date: Sat Nov 28 23:09:36 2015
New Revision: 28127
URL: http://svn.gna.org/viewcvs/relax?rev=28127=rev
Log:
Adding checking statements to intstall script.
Modified:
trunk/devel_scripts/deploy_google_computing_ubuntu.sh
Modified: trunk/devel_scripts
Author: tlinnet
Date: Sat Nov 28 21:11:09 2015
New Revision: 28122
URL: http://svn.gna.org/viewcvs/relax?rev=28122=rev
Log:
Adding a testing deploy script, for rapid deployment on Google Cloud Computing.
This is for intented install in Ubuntu 14.04 LTS
Added:
trunk/devel_scripts
Author: tlinnet
Date: Sun Nov 29 00:10:39 2015
New Revision: 28132
URL: http://svn.gna.org/viewcvs/relax?rev=28132=rev
Log:
Fix for small spin id error in tutorial script.
Modified:
trunk/test_suite/shared_data/dispersion/Paul_Schanda_2015_Nov/3_tutorial_clustered.py
Modified:
trunk
Author: tlinnet
Date: Sat Nov 28 21:36:46 2015
New Revision: 28123
URL: http://svn.gna.org/viewcvs/relax?rev=28123=rev
Log:
Expanding script for installation.
Modified:
trunk/devel_scripts/deploy_google_computing_ubuntu.sh
Modified: trunk/devel_scripts/deploy_google_computing_ubuntu.sh
URL
Author: tlinnet
Date: Sat Nov 28 23:28:20 2015
New Revision: 28129
URL: http://svn.gna.org/viewcvs/relax?rev=28129=rev
Log:
Added spaces to install script for better printing.
Modified:
trunk/devel_scripts/deploy_google_computing_ubuntu.sh
Modified: trunk/devel_scripts
Author: tlinnet
Date: Sat Nov 28 23:56:54 2015
New Revision: 28130
URL: http://svn.gna.org/viewcvs/relax?rev=28130=rev
Log:
Adding a tutorial script.
Added:
trunk/test_suite/shared_data/dispersion/Paul_Schanda_2015_Nov/1_tutorial_prepare_data.py
Added:
trunk/test_suite/shared_data
Author: tlinnet
Date: Sun Nov 29 00:05:43 2015
New Revision: 28131
URL: http://svn.gna.org/viewcvs/relax?rev=28131=rev
Log:
Adding 2 tutorial scripts.
Added:
trunk/test_suite/shared_data/dispersion/Paul_Schanda_2015_Nov/2_tutorial_load_data.py
trunk/test_suite/shared_data/dispersion
Author: tlinnet
Date: Sat Nov 28 21:49:28 2015
New Revision: 28124
URL: http://svn.gna.org/viewcvs/relax?rev=28124=rev
Log:
Putting installation into functions in deploy script.
Modified:
trunk/devel_scripts/deploy_google_computing_ubuntu.sh
Modified: trunk/devel_scripts
Author: tlinnet
Date: Sat Nov 28 21:56:29 2015
New Revision: 28125
URL: http://svn.gna.org/viewcvs/relax?rev=28125=rev
Log:
Small changes to deploy script.
Modified:
trunk/devel_scripts/deploy_google_computing_ubuntu.sh
Modified: trunk/devel_scripts/deploy_google_computing_ubuntu.sh
URL
Author: tlinnet
Date: Sat Nov 28 23:24:20 2015
New Revision: 28128
URL: http://svn.gna.org/viewcvs/relax?rev=28128=rev
Log:
When sourcing the scripts, several functions can be performed instead.
Modified:
trunk/devel_scripts/deploy_google_computing_ubuntu.sh
Modified: trunk/devel_scripts
Author: tlinnet
Date: Tue Nov 24 08:15:43 2015
New Revision: 28094
URL: http://svn.gna.org/viewcvs/relax?rev=28094=rev
Log:
Fix for spelling mistake and documenting the new behavior of
relax_disp.r2eff_read(), when reading r2eff points with the same frequency.
If the spin-container already
Author: tlinnet
Date: Tue Nov 24 08:15:35 2015
New Revision: 28093
URL: http://svn.gna.org/viewcvs/relax?rev=28093=rev
Log:
Using Gary's lib.float.isNaN() instead of math.isnan(), to have backwards
compability with python 2.5.
Modified:
trunk/lib/sequence.py
Modified: trunk/lib/sequence.py
Author: tlinnet
Date: Sun Nov 22 16:02:30 2015
New Revision: 28077
URL: http://svn.gna.org/viewcvs/relax?rev=28077=rev
Log:
Making sure that the replicated 4000 Hz point fpr the 950 MHz experiment is not
overwritten.
Modified:
trunk/test_suite/shared_data/dispersion/Paul_Schanda_2015_Nov
Author: tlinnet
Date: Sun Nov 22 16:02:42 2015
New Revision: 28082
URL: http://svn.gna.org/viewcvs/relax?rev=28082=rev
Log:
In the function of r2eff_read, in data module of the dispersion, added the
possibilities to read
r2eff values which are replicated.
This is done first checking
Author: tlinnet
Date: Sun Nov 22 16:02:35 2015
New Revision: 28079
URL: http://svn.gna.org/viewcvs/relax?rev=28079=rev
Log:
In the systemtest of -s Relax_disp.test_paul_schanda_nov_2015, added a test of
counting the R2eff values.
This shows that the replicaceted R2eff at 950 MHz/4000 Hz point
Author: tlinnet
Date: Sun Nov 22 16:02:39 2015
New Revision: 28081
URL: http://svn.gna.org/viewcvs/relax?rev=28081=rev
Log:
Added further tests to -s Relax_disp.test_paul_schanda_nov_2015.
This will show that replicates of R2eff values is not handled well.
Modified:
trunk/test_suite
Author: tlinnet
Date: Sun Nov 22 16:02:33 2015
New Revision: 28078
URL: http://svn.gna.org/viewcvs/relax?rev=28078=rev
Log:
Small fix for an example script.
Modified:
trunk/test_suite/shared_data/dispersion/Paul_Schanda_2015_Nov/2_load_data.py
Modified:
trunk/test_suite/shared_data
Author: tlinnet
Date: Sun Nov 22 16:19:21 2015
New Revision: 28084
URL: http://svn.gna.org/viewcvs/relax?rev=28084=rev
Log:
Raising an error if plotting dispersion curves, and no model is saved.
Modified:
trunk/specific_analyses/relax_disp/data.py
Modified: trunk/specific_analyses
Author: tlinnet
Date: Sun Nov 22 18:02:17 2015
New Revision: 28089
URL: http://svn.gna.org/viewcvs/relax?rev=28089=rev
Log:
Added GUI test: relax --gui-tests Relax_disp.test_paul_schanda_nov_2015 --time
-d
This will show that loading a state will create a problem.
Traceback (most recent call
Author: tlinnet
Date: Sun Nov 22 18:02:12 2015
New Revision: 28087
URL: http://svn.gna.org/viewcvs/relax?rev=28087=rev
Log:
Extended the systemtest -s Relax_disp.test_paul_schanda_nov_2015 to include
auto analysis and clustered fits.
This should show that the analysis is now possible.
Modified
Author: tlinnet
Date: Sun Nov 22 18:02:15 2015
New Revision: 28088
URL: http://svn.gna.org/viewcvs/relax?rev=28088=rev
Log:
Added a temporary state and a script for GUI setup to the data Paul Schanda.
Added:
trunk/test_suite/shared_data/dispersion/Paul_Schanda_2015_Nov/2_load_data_GUI.py
Author: tlinnet
Date: Sun Nov 22 18:02:10 2015
New Revision: 28086
URL: http://svn.gna.org/viewcvs/relax?rev=28086=rev
Log:
Removed lines in example script.
Modified:
trunk/test_suite/shared_data/dispersion/Paul_Schanda_2015_Nov/2_load_data.py
Modified:
trunk/test_suite/shared_data
Author: tlinnet
Date: Sun Nov 22 19:03:10 2015
New Revision: 28090
URL: http://svn.gna.org/viewcvs/relax?rev=28090=rev
Log:
Fix for GUI test: relax --gui-tests Relax_disp.test_paul_schanda_nov_2015
--time -d.
When loading from a script state file, the value of "None" can be present.
T
Author: tlinnet
Date: Sat Nov 21 15:08:17 2015
New Revision: 28076
URL: http://svn.gna.org/viewcvs/relax?rev=28076=rev
Log:
Made additional check in sequence reading, that "nan" values are skipped.
Modified:
trunk/lib/sequence.py
Modified: trunk/lib/sequence.py
URL:
http://s
Author: tlinnet
Date: Fri Nov 20 19:17:22 2015
New Revision: 28075
URL: http://svn.gna.org/viewcvs/relax?rev=28075=rev
Log:
Added systemtest relax -s Relax_disp.test_paul_schanda_nov_2015 -d.
This will cathc the loaning of "nan" values.
Modified:
trunk/test_suite/system_tests/rel
Author: tlinnet
Date: Fri Nov 20 19:17:16 2015
New Revision: 28074
URL: http://svn.gna.org/viewcvs/relax?rev=28074=rev
Log:
Added initial data for testing data from Paul Schanda.
This will demonstrate that there are several possibilities to enhance the r2eff
point method.
Added:
trunk
Author: tlinnet
Date: Thu Jul 23 14:08:17 2015
New Revision: 27866
URL: http://svn.gna.org/viewcvs/relax?rev=27866view=rev
Log:
Made a summarize function to compare results.
Task #7826 (https://gna.org/task/?7826): Write an python class for the repeated
analysis of dispersion data.
Modified
Author: tlinnet
Date: Mon Jun 15 23:12:52 2015
New Revision: 27852
URL: http://svn.gna.org/viewcvs/relax?rev=27852view=rev
Log:
Added sample data and analysis script, that will eventually show that there is
not much differentce in the sample statistics used for comparing the output of
two
very
Author: tlinnet
Date: Sat Jun 13 14:00:39 2015
New Revision: 27849
URL: http://svn.gna.org/viewcvs/relax?rev=27849view=rev
Log:
Added unittest that shows the trickers the bug.
Test added in test_delete_spin_all, and can be accessed with: relax -u
_pipe_control.test_spin.
Bug #23642 (https
Author: tlinnet
Date: Sat Jun 13 14:08:44 2015
New Revision: 27850
URL: http://svn.gna.org/viewcvs/relax?rev=27850view=rev
Log:
Fix committed, where an empty spin placeholder has the select flag set to False.
Bug #23642 (https://gna.org/bugs/index.php?23642): When deleting all spins
Author: tlinnet
Date: Thu Jun 11 13:15:54 2015
New Revision: 27848
URL: http://svn.gna.org/viewcvs/relax?rev=27848view=rev
Log:
Reverted r27840-r27845, related to Bug #23618, queuing system for multi
processors is not well designed.
The changes has not been proven to increase the minimisation
Author: tlinnet
Date: Fri May 29 18:32:43 2015
New Revision: 27847
URL: http://svn.gna.org/viewcvs/relax?rev=27847view=rev
Log:
Small fix for the shell script to collect data files, and not use the program
column in the end.
The line width becomes to large to handle for column.
Task #7826
Author: tlinnet
Date: Thu May 28 18:15:48 2015
New Revision: 27846
URL: http://svn.gna.org/viewcvs/relax?rev=27846view=rev
Log:
Added additional test to systemtest
Relax_disp.test_bug_23186_cluster_error_calc_dw() to prove that Bug #23619 is
invalid.
Bug #23619: (https://gna.org/bugs/index.php
Author: tlinnet
Date: Wed May 27 03:09:40 2015
New Revision: 27836
URL: http://svn.gna.org/viewcvs/relax?rev=27836view=rev
Log:
In the collection bash script, removes spins which have not been fitted.
Task #7826 (https://gna.org/task/?7826): Write an python class for the repeated
analysis
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