Re: Javascript problems on the relax wiki.

2015-10-20 Thread Troels Emtekær Linnet
Hi Edward.

I have tried:
http://wiki.nmr-relax.com/Javascript_testing

For me this looks fine?

For the NavFrame test, I see both an expanded and collapsed box.

Is the error, that you don't see " the [hide] and [show] links to the right
of the titles" ?

This must be what you are missing:
*I also don't see the possibility to expand or hide.*

From:
http://wiki.nmr-relax.com/Special:Version

I see:
MediaWiki 1.21.1
PHP 5.3.29 (cgi-fcgi)
MySQL 5.6.25-1~dotdeb+7.1

Latest version of Mediawiki is:
1.25.3, and 1.21.1 is from 2013-05-25.
https://www.mediawiki.org/wiki/News

On the server is: PHP 5.3 enabled.
I can change to: 5.4, 5.5, 5.6, 7.0 (RC).

And there is options to change for PHP.
allow_url_fopen: On
allow_url_include: On
always_populate_raw_post_data: 0
apc.rfc1867: On
asp_tags: On
date.timezone
default_mimetype: text/html
display_errors: On
engine: On
expose_php: On
file_uploads: On
html_errors: On
magic_quotes_gpc: Off
max_execution_time: 30
max_file_uploads: 20
max_input_time: 60
max_input_vars: 1000
mbstring.func_overload: 0
mbstring.internal_encoding:
memory_limit: 128 MB
mysql.allow_persistent: On
mysql.default_host:
mysql.default_port: 3306
mysql.default_user:
mysql.trace_mode: Off
output_buffering: Off
post_max_size: 32 Mb
realpath_cache_size: 16
realpath_cache_ttl: 120
register_globals: Off
safe_mode: Off
session.auto_start: Off
session.bug_compat_42: Off
session.bug_compat_warn: Off
session.cookie_domain:
session.cookie_lifetime: 0
session.cookie_path: /
session.gc_maxlifetime: 3600

and some 20 more.


Does any of this help you?

Best
Troels




2015-10-19 14:59 GMT+02:00 Edward d'Auvergne :

> Hi Troels,
>
> I am having problems with javascript on the wiki, and was wondering if
> you might have an idea what the problem might be.  I have been trying
> to set up a template to allow for collapsible scripts based on the
> NavFrame, to de-clutter some of the wiki articles.  The template is:
>
> http://wiki.nmr-relax.com/Template:Collapsible_script
>
> This is based on exactly the same template I wrote at:
>
>http://wiki.flightgear.org/Template:Collapsible_script
>
> The idea is based on the collapsible NavFrame examples at:
>
> https://www.mediawiki.org/wiki/Manual:Collapsible_elements
>
> The problem is that javascript is not working properly on the relax
> wiki and the [hide] and [show] text programmatically inserted into the
>  element to allow it to collapse and expand is missing (it can be
> seen as functional on the FlightGear wiki, for reference).  To check
> our set up, I've set up a test page at:
>
> http://wiki.nmr-relax.com/Javascript_testing
>
> This shows that Javascript is now working (previously it was not due
> to the Harvard references js), but that the NavFrame javascript is
> not.  I do not know why this is not working, as according to the
> Manual:Collapsible_elements page, this should work from MediaWiki 1.18
> and above (we are using 1.21.1).  I have inserted the relevant
> javascript and CSS at:
>
> http://wiki.nmr-relax.com/MediaWiki:Common.js
> http://wiki.nmr-relax.com/MediaWiki:Common.css
>
> Would you have an idea why this is not working?  I tried commenting
> out all extensions in the LocalSettings.php file, but that did not
> help on the http://wiki.nmr-relax.com/Javascript_testing page.  This
> really has me stumped!  Maybe it is a bug in MediaWiki itself, and we
> need to update it?  Maybe it is related to the bug "Fix comma errors
> in various js files" fixed in MediaWiki 1.21.3 (
> https://www.mediawiki.org/wiki/Release_notes/1.21#MediaWiki_1.21.3 ) -
> this might cause other javascript to be broken.
>
> Cheers,
>
> Edward
>
> ___
> relax (http://www.nmr-relax.com)
>
> This is the relax-devel mailing list
> relax-devel@gna.org
>
> To unsubscribe from this list, get a password
> reminder, or change your subscription options,
> visit the list information page at
> https://mail.gna.org/listinfo/relax-devel
>
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Re: Javascript problems on the relax wiki.

2015-10-20 Thread Troels Emtekær Linnet
Hi Edward.

In:
https://www.mediawiki.org/wiki/Manual:Collapsible_elements#NavFrame

It says with red text, that* MediaWiki version: ≤ 1.18*

*??*


2015-10-20 12:45 GMT+02:00 Troels Emtekær Linnet :

> Hi Edward.
>
> I have tried:
> http://wiki.nmr-relax.com/Javascript_testing
>
> For me this looks fine?
>
> For the NavFrame test, I see both an expanded and collapsed box.
>
> Is the error, that you don't see " the [hide] and [show] links to the
> right of the titles" ?
>
> This must be what you are missing:
> *I also don't see the possibility to expand or hide.*
>
> From:
> http://wiki.nmr-relax.com/Special:Version
>
> I see:
> MediaWiki 1.21.1
> PHP 5.3.29 (cgi-fcgi)
> MySQL 5.6.25-1~dotdeb+7.1
>
> Latest version of Mediawiki is:
> 1.25.3, and 1.21.1 is from 2013-05-25.
> https://www.mediawiki.org/wiki/News
>
> On the server is: PHP 5.3 enabled.
> I can change to: 5.4, 5.5, 5.6, 7.0 (RC).
>
> And there is options to change for PHP.
> allow_url_fopen: On
> allow_url_include: On
> always_populate_raw_post_data: 0
> apc.rfc1867: On
> asp_tags: On
> date.timezone
> default_mimetype: text/html
> display_errors: On
> engine: On
> expose_php: On
> file_uploads: On
> html_errors: On
> magic_quotes_gpc: Off
> max_execution_time: 30
> max_file_uploads: 20
> max_input_time: 60
> max_input_vars: 1000
> mbstring.func_overload: 0
> mbstring.internal_encoding:
> memory_limit: 128 MB
> mysql.allow_persistent: On
> mysql.default_host:
> mysql.default_port: 3306
> mysql.default_user:
> mysql.trace_mode: Off
> output_buffering: Off
> post_max_size: 32 Mb
> realpath_cache_size: 16
> realpath_cache_ttl: 120
> register_globals: Off
> safe_mode: Off
> session.auto_start: Off
> session.bug_compat_42: Off
> session.bug_compat_warn: Off
> session.cookie_domain:
> session.cookie_lifetime: 0
> session.cookie_path: /
> session.gc_maxlifetime: 3600
>
> and some 20 more.
>
>
> Does any of this help you?
>
> Best
> Troels
>
>
>
>
> 2015-10-19 14:59 GMT+02:00 Edward d'Auvergne :
>
>> Hi Troels,
>>
>> I am having problems with javascript on the wiki, and was wondering if
>> you might have an idea what the problem might be.  I have been trying
>> to set up a template to allow for collapsible scripts based on the
>> NavFrame, to de-clutter some of the wiki articles.  The template is:
>>
>> http://wiki.nmr-relax.com/Template:Collapsible_script
>>
>> This is based on exactly the same template I wrote at:
>>
>>http://wiki.flightgear.org/Template:Collapsible_script
>>
>> The idea is based on the collapsible NavFrame examples at:
>>
>> https://www.mediawiki.org/wiki/Manual:Collapsible_elements
>>
>> The problem is that javascript is not working properly on the relax
>> wiki and the [hide] and [show] text programmatically inserted into the
>>  element to allow it to collapse and expand is missing (it can be
>> seen as functional on the FlightGear wiki, for reference).  To check
>> our set up, I've set up a test page at:
>>
>> http://wiki.nmr-relax.com/Javascript_testing
>>
>> This shows that Javascript is now working (previously it was not due
>> to the Harvard references js), but that the NavFrame javascript is
>> not.  I do not know why this is not working, as according to the
>> Manual:Collapsible_elements page, this should work from MediaWiki 1.18
>> and above (we are using 1.21.1).  I have inserted the relevant
>> javascript and CSS at:
>>
>> http://wiki.nmr-relax.com/MediaWiki:Common.js
>> http://wiki.nmr-relax.com/MediaWiki:Common.css
>>
>> Would you have an idea why this is not working?  I tried commenting
>> out all extensions in the LocalSettings.php file, but that did not
>> help on the http://wiki.nmr-relax.com/Javascript_testing page.  This
>> really has me stumped!  Maybe it is a bug in MediaWiki itself, and we
>> need to update it?  Maybe it is related to the bug "Fix comma errors
>> in various js files" fixed in MediaWiki 1.21.3 (
>> https://www.mediawiki.org/wiki/Release_notes/1.21#MediaWiki_1.21.3 ) -
>> this might cause other javascript to be broken.
>>
>> Cheers,
>>
>> Edward
>>
>> ___
>> relax (http://www.nmr-relax.com)
>>
>> This is the relax-devel mailing list
>> relax-devel@gna.org
>>
>> To unsubscribe from this list, get a password
>> reminder, or change your subscription options,
>> visit the list information page at
>> https://mail.gna.org/listinfo/relax-devel
>>
>
>
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Re: Javascript problems on the relax wiki.

2015-10-20 Thread Troels Emtekær Linnet
I am currently trying.

I will return.

best
Troels

2015-10-20 15:41 GMT+02:00 Edward d'Auvergne :

> On 20 October 2015 at 15:36, Troels Emtekær Linnet
>  wrote:
> > Hi.
> >
> > When I upgrade from 5.3, the page is flooded with problems relating to:
> >
> > includes/MagicWord.php
> >
> > http://www.gossamer-threads.com/lists/wiki/mediawiki/504636
> >
> > The fix is to update the wiki.
>
> Is there shell access to run the MediaWiki update.php script?  Or is
> this web-interface only?  I can help with updating the extensions, and
> we can do this gradually.
>
> Cheers,
>
> Edward
>
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Re: Javascript problems on the relax wiki.

2015-10-20 Thread Edward d'Auvergne
Thank you!  Just shout out if you need assistance.

Regards,

Edward

On 20 October 2015 at 15:50, Troels Emtekær Linnet
 wrote:
> I am currently trying.
>
> I will return.
>
> best
> Troels
>
> 2015-10-20 15:41 GMT+02:00 Edward d'Auvergne :
>>
>> On 20 October 2015 at 15:36, Troels Emtekær Linnet
>>  wrote:
>> > Hi.
>> >
>> > When I upgrade from 5.3, the page is flooded with problems relating to:
>> >
>> > includes/MagicWord.php
>> >
>> > http://www.gossamer-threads.com/lists/wiki/mediawiki/504636
>> >
>> > The fix is to update the wiki.
>>
>> Is there shell access to run the MediaWiki update.php script?  Or is
>> this web-interface only?  I can help with updating the extensions, and
>> we can do this gradually.
>>
>> Cheers,
>>
>> Edward
>
>

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Re: Javascript problems on the relax wiki.

2015-10-20 Thread Edward d'Auvergne
We are coming back:


https://web.archive.org/web/20151020142128/http://wiki.nmr-relax.com/Main_Page

:)



On 20 October 2015 at 15:52, Edward d'Auvergne  wrote:
> Thank you!  Just shout out if you need assistance.
>
> Regards,
>
> Edward
>
> On 20 October 2015 at 15:50, Troels Emtekær Linnet
>  wrote:
>> I am currently trying.
>>
>> I will return.
>>
>> best
>> Troels
>>
>> 2015-10-20 15:41 GMT+02:00 Edward d'Auvergne :
>>>
>>> On 20 October 2015 at 15:36, Troels Emtekær Linnet
>>>  wrote:
>>> > Hi.
>>> >
>>> > When I upgrade from 5.3, the page is flooded with problems relating to:
>>> >
>>> > includes/MagicWord.php
>>> >
>>> > http://www.gossamer-threads.com/lists/wiki/mediawiki/504636
>>> >
>>> > The fix is to update the wiki.
>>>
>>> Is there shell access to run the MediaWiki update.php script?  Or is
>>> this web-interface only?  I can help with updating the extensions, and
>>> we can do this gradually.
>>>
>>> Cheers,
>>>
>>> Edward
>>
>>

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Re: Javascript problems on the relax wiki.

2015-10-20 Thread Troels Emtekær Linnet
Upgrade existing installation
Information

There are MediaWiki tables in this database. To upgrade them to MediaWiki
1.25.3, click Continue.

2015-10-20 16:34 GMT+02:00 Troels Emtekær Linnet :

> Welcome to MediaWiki!
> Environmental checks
>
> Basic checks will now be performed to see if this environment is suitable
> for MediaWiki installation. Remember to include this information if you
> seek support on how to complete the installation.
> PHP 5.6.13 is installed.
> Warning: Could not find APC, XCache or WinCache.
>
> Object caching is not enabled.
> Found ImageMagick: /usr/bin/convert.
>
> Image thumbnailing will be enabled if you enable uploads.
> Found the Git version control software: /usr/bin/git.
> Using server name "http://wiki.nmr-relax.com;.
> Using server URL "http://wiki.nmr-relax.com;.
> Using the intl PECL extension for Unicode normalization.
>
>
>
> The environment has been checked. You can install MediaWiki.
>
> 2015-10-20 16:32 GMT+02:00 Troels Emtekær Linnet :
>
>> Hi Edward.
>>
>> 1) I downloaded a backup of old wiki and made MYSQL dump
>> 2) I downloaded and unpacked new wiki
>> 3) At server, I deleted old files, and changed PHP version to 5.6
>> 4) I uploaded new wiki files to server
>> 5) I copied the old Localsettings file and .htacess files
>> 6) I modified Localsettings, and commented out all all extensions
>> 7) I uploaded the Localsettings file, and .htaccess
>> 8) I went to: http://wiki.nmr-relax.com/mw-config/  to update.
>>
>> This is where I am at the moment
>>
>> I will have to:
>>
>> Upload image files
>> Update extensions
>>
>> Best
>> Troels
>>
>>
>> 2015-10-20 16:22 GMT+02:00 Edward d'Auvergne :
>>
>>> We are coming back:
>>>
>>>
>>> https://web.archive.org/web/20151020142128/http://wiki.nmr-relax.com/Main_Page
>>>
>>> :)
>>>
>>>
>>>
>>> On 20 October 2015 at 15:52, Edward d'Auvergne 
>>> wrote:
>>> > Thank you!  Just shout out if you need assistance.
>>> >
>>> > Regards,
>>> >
>>> > Edward
>>> >
>>> > On 20 October 2015 at 15:50, Troels Emtekær Linnet
>>> >  wrote:
>>> >> I am currently trying.
>>> >>
>>> >> I will return.
>>> >>
>>> >> best
>>> >> Troels
>>> >>
>>> >> 2015-10-20 15:41 GMT+02:00 Edward d'Auvergne :
>>> >>>
>>> >>> On 20 October 2015 at 15:36, Troels Emtekær Linnet
>>> >>>  wrote:
>>> >>> > Hi.
>>> >>> >
>>> >>> > When I upgrade from 5.3, the page is flooded with problems
>>> relating to:
>>> >>> >
>>> >>> > includes/MagicWord.php
>>> >>> >
>>> >>> > http://www.gossamer-threads.com/lists/wiki/mediawiki/504636
>>> >>> >
>>> >>> > The fix is to update the wiki.
>>> >>>
>>> >>> Is there shell access to run the MediaWiki update.php script?  Or is
>>> >>> this web-interface only?  I can help with updating the extensions,
>>> and
>>> >>> we can do this gradually.
>>> >>>
>>> >>> Cheers,
>>> >>>
>>> >>> Edward
>>> >>
>>> >>
>>>
>>
>>
>
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Re: Javascript problems on the relax wiki.

2015-10-20 Thread Troels Emtekær Linnet
Hi Edward.

1) I downloaded a backup of old wiki and made MYSQL dump
2) I downloaded and unpacked new wiki
3) At server, I deleted old files, and changed PHP version to 5.6
4) I uploaded new wiki files to server
5) I copied the old Localsettings file and .htacess files
6) I modified Localsettings, and commented out all all extensions
7) I uploaded the Localsettings file, and .htaccess
8) I went to: http://wiki.nmr-relax.com/mw-config/  to update.

This is where I am at the moment

I will have to:

Upload image files
Update extensions

Best
Troels


2015-10-20 16:22 GMT+02:00 Edward d'Auvergne :

> We are coming back:
>
>
> https://web.archive.org/web/20151020142128/http://wiki.nmr-relax.com/Main_Page
>
> :)
>
>
>
> On 20 October 2015 at 15:52, Edward d'Auvergne 
> wrote:
> > Thank you!  Just shout out if you need assistance.
> >
> > Regards,
> >
> > Edward
> >
> > On 20 October 2015 at 15:50, Troels Emtekær Linnet
> >  wrote:
> >> I am currently trying.
> >>
> >> I will return.
> >>
> >> best
> >> Troels
> >>
> >> 2015-10-20 15:41 GMT+02:00 Edward d'Auvergne :
> >>>
> >>> On 20 October 2015 at 15:36, Troels Emtekær Linnet
> >>>  wrote:
> >>> > Hi.
> >>> >
> >>> > When I upgrade from 5.3, the page is flooded with problems relating
> to:
> >>> >
> >>> > includes/MagicWord.php
> >>> >
> >>> > http://www.gossamer-threads.com/lists/wiki/mediawiki/504636
> >>> >
> >>> > The fix is to update the wiki.
> >>>
> >>> Is there shell access to run the MediaWiki update.php script?  Or is
> >>> this web-interface only?  I can help with updating the extensions, and
> >>> we can do this gradually.
> >>>
> >>> Cheers,
> >>>
> >>> Edward
> >>
> >>
>
___
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Re: Javascript problems on the relax wiki.

2015-10-20 Thread Troels Emtekær Linnet
Welcome to MediaWiki!
Environmental checks

Basic checks will now be performed to see if this environment is suitable
for MediaWiki installation. Remember to include this information if you
seek support on how to complete the installation.
PHP 5.6.13 is installed.
Warning: Could not find APC, XCache or WinCache.

Object caching is not enabled.
Found ImageMagick: /usr/bin/convert.

Image thumbnailing will be enabled if you enable uploads.
Found the Git version control software: /usr/bin/git.
Using server name "http://wiki.nmr-relax.com;.
Using server URL "http://wiki.nmr-relax.com;.
Using the intl PECL extension for Unicode normalization.



The environment has been checked. You can install MediaWiki.

2015-10-20 16:32 GMT+02:00 Troels Emtekær Linnet :

> Hi Edward.
>
> 1) I downloaded a backup of old wiki and made MYSQL dump
> 2) I downloaded and unpacked new wiki
> 3) At server, I deleted old files, and changed PHP version to 5.6
> 4) I uploaded new wiki files to server
> 5) I copied the old Localsettings file and .htacess files
> 6) I modified Localsettings, and commented out all all extensions
> 7) I uploaded the Localsettings file, and .htaccess
> 8) I went to: http://wiki.nmr-relax.com/mw-config/  to update.
>
> This is where I am at the moment
>
> I will have to:
>
> Upload image files
> Update extensions
>
> Best
> Troels
>
>
> 2015-10-20 16:22 GMT+02:00 Edward d'Auvergne :
>
>> We are coming back:
>>
>>
>> https://web.archive.org/web/20151020142128/http://wiki.nmr-relax.com/Main_Page
>>
>> :)
>>
>>
>>
>> On 20 October 2015 at 15:52, Edward d'Auvergne 
>> wrote:
>> > Thank you!  Just shout out if you need assistance.
>> >
>> > Regards,
>> >
>> > Edward
>> >
>> > On 20 October 2015 at 15:50, Troels Emtekær Linnet
>> >  wrote:
>> >> I am currently trying.
>> >>
>> >> I will return.
>> >>
>> >> best
>> >> Troels
>> >>
>> >> 2015-10-20 15:41 GMT+02:00 Edward d'Auvergne :
>> >>>
>> >>> On 20 October 2015 at 15:36, Troels Emtekær Linnet
>> >>>  wrote:
>> >>> > Hi.
>> >>> >
>> >>> > When I upgrade from 5.3, the page is flooded with problems relating
>> to:
>> >>> >
>> >>> > includes/MagicWord.php
>> >>> >
>> >>> > http://www.gossamer-threads.com/lists/wiki/mediawiki/504636
>> >>> >
>> >>> > The fix is to update the wiki.
>> >>>
>> >>> Is there shell access to run the MediaWiki update.php script?  Or is
>> >>> this web-interface only?  I can help with updating the extensions, and
>> >>> we can do this gradually.
>> >>>
>> >>> Cheers,
>> >>>
>> >>> Edward
>> >>
>> >>
>>
>
>
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Re: Javascript problems on the relax wiki.

2015-10-20 Thread Troels Emtekær Linnet
Turning off Content Handler DB fields for this part of upgrade.
...have ipb_id field in ipblocks table.
...have ipb_expiry field in ipblocks table.
...already have interwiki table
...indexes seem up to 20031107 standards.
...have rc_type field in recentchanges table.
...index new_name_timestamp already set on recentchanges table.
...have user_real_name field in user table.
...querycache table already exists.
...objectcache table already exists.
...categorylinks table already exists.
...have pagelinks; skipping old links table updates
...il_from OK
...have rc_ip field in recentchanges table.
...index PRIMARY already set on image table.
...have rc_id field in recentchanges table.
...have rc_patrolled field in recentchanges table.
...logging table already exists.
...have user_token field in user table.
...have wl_notificationtimestamp field in watchlist table.
...watchlist talk page rows already present.
...user table does not contain user_emailauthenticationtimestamp field.
...page table already exists.
...have log_params field in logging table.
...logging table has correct log_title encoding.
...have ar_rev_id field in archive table.
...have page_len field in page table.
...revision table does not contain inverse_timestamp field.
...have rev_text_id field in revision table.
...have rev_deleted field in revision table.
...have img_width field in image table.
...have img_metadata field in image table.
...have user_email_token field in user table.
...have ar_text_id field in archive table.
...page_namespace is already a full int (int(11)).
...ar_namespace is already a full int (int(11)).
...rc_namespace is already a full int (int(11)).
...wl_namespace is already a full int (int(11)).
...qc_namespace is already a full int (int(11)).
...log_namespace is already a full int (int(11)).
...have img_media_type field in image table.
...already have pagelinks table.
...image table does not contain img_type field.
...already have unique user_name index.
...user_groups table exists and is in current format.
...have ss_total_pages field in site_stats table.
...user_newtalk table already exists.
...transcache table already exists.
...have iw_trans field in interwiki table.
...wl_notificationtimestamp is already nullable.
...index times already set on logging table.
...have ipb_range_start field in ipblocks table.
...no page_random rows needed to be set
...have user_registration field in user table.
...templatelinks table already exists
...externallinks table already exists.
...job table already exists.
...have ss_images field in site_stats table.
...langlinks table already exists.
...querycache_info table already exists.
...filearchive table already exists.
...have ipb_anon_only field in ipblocks table.
...index rc_ns_usertext already set on recentchanges table.
...index rc_user_text already set on recentchanges table.
...have user_newpass_time field in user table.
...redirect table already exists.
...querycachetwo table already exists.
...have ipb_enable_autoblock field in ipblocks table.
...index pl_namespace on table pagelinks includes field pl_from.
...index tl_namespace on table templatelinks includes field tl_from.
...index il_to on table imagelinks includes field il_from.
...have rc_old_len field in recentchanges table.
...have user_editcount field in user table.
...page_restrictions table already exists.
...have log_id field in logging table.
...have rev_parent_id field in revision table.
...have pr_id field in page_restrictions table.
...have rev_len field in revision table.
...have rc_deleted field in recentchanges table.
...have log_deleted field in logging table.
...have ar_deleted field in archive table.
...have ipb_deleted field in ipblocks table.
...have fa_deleted field in filearchive table.
...have ar_len field in archive table.
...have ipb_block_email field in ipblocks table.
...index cl_sortkey on table categorylinks includes field cl_from.
...have oi_metadata field in oldimage table.
...index usertext_timestamp already set on archive table.
...index img_usertext_timestamp already set on image table.
...index oi_usertext_timestamp already set on oldimage table.
...have ar_page_id field in archive table.
...have img_sha1 field in image table.
...protected_titles table already exists.
...have ipb_by_text field in ipblocks table.
...page_props table already exists.
...updatelog table already exists.
...category table already exists.
...category table already populated.
...have ar_parent_id field in archive table.
...have user_last_timestamp field in user_newtalk table.
...protected_titles table has correct pt_title encoding.
...have ss_active_users field in site_stats table.
...ss_active_users user count set...
...have ipb_allow_usertalk field in ipblocks table.
...pl_namespace, tl_namespace, il_to indices are already UNIQUE.
...change_tag table already exists.
...tag_summary table already exists.
...valid_tag table already exists.
...user_properties table already exists.
...log_search table already 

Re: Javascript problems on the relax wiki.

2015-10-20 Thread Troels Emtekær Linnet
Homepage slide gallery is now working.

I try to disable htaccess

.htaccess renamed to htaccess



2015-10-20 17:12 GMT+02:00 Troels Emtekær Linnet :

> http://wiki.nmr-relax.com/Phpinfo.php
>
> Is uploaded.
>
> I now try to unlock database.
>
> So I can try:
> http://wiki.nmr-relax.com/Phpinfo.php?action=purge
>
>
>
> 2015-10-20 17:08 GMT+02:00 Troels Emtekær Linnet :
>
>> Hi Edward.
>>
>> I have uploaded:
>>
>> skins/common with favicon and ulysses images
>> images/*
>>
>> Currently, this does not work
>>
>> http://wiki.nmr-relax.com/File:Analysis_r1.png
>> http://wiki.nmr-relax.com/images/9/96/Analysis_r1.png
>>
>> 2015-10-20 16:55 GMT+02:00 Edward d'Auvergne :
>>
>>> On 20 October 2015 at 16:44, Troels Emtekær Linnet
>>>  wrote:
>>> > Hi Edward.
>>> >
>>> > We are up:
>>> >
>>> > http://wiki.nmr-relax.com/Main_Page
>>> > http://wiki.nmr-relax.com/Special:Version
>>> > http://wiki.nmr-relax.com/Javascript_testing
>>> >
>>> > The wiki is currently locked for editing:
>>> >
>>> > $wgReadOnly = 'Upgrading to MediaWiki 1.25.3';
>>> >
>>> > I will now upload images
>>>
>>> I'm watching the changes, and capturing some of the steps on the
>>> wayback machine (for curiosity):
>>>
>>>
>>> https://web.archive.org/web/20151020142128/http://wiki.nmr-relax.com/Main_Page
>>>
>>> https://web.archive.org/web/20151020143925/http://wiki.nmr-relax.com/Main_Page
>>>
>>> https://web.archive.org/web/20151020143930/http://wiki.nmr-relax.com/Special:Version
>>>
>>> I'm also keen to see what happens on this test page:
>>>
>>> http://wiki.nmr-relax.com/Temp_lua_testing_page
>>>
>>> If this upgrade gets Lua to work, then maybe this thread can be
>>> resurrected:
>>>
>>> http://thread.gmane.org/gmane.science.nmr.relax.devel/7046
>>>
>>> And Wikipedia Template:Infobox elements (using the Scribunto
>>> extension) can be added for all the relax releases.
>>>
>>> Cheers!
>>>
>>> Edward
>>>
>>
>>
>
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Re: Javascript problems on the relax wiki.

2015-10-20 Thread Edward d'Auvergne
I currently know absolutely nothing about .htaccess files, but might
this offer a solution:
http://www.fvue.nl/wiki/MediaWiki_error:_No_input_file_specified

Regards,

Edward


On 20 October 2015 at 18:13, Edward d'Auvergne  wrote:
> I think this is something to do with .htaccess, as it is clearly
> nothing to do with the MediaWiki part:
>
> """
> [edward@localhost wiki]$ wget
> http://wiki.nmr-relax.com/images/1/1d/Screenshot_start.png
> --2015-10-20 18:10:12--
> http://wiki.nmr-relax.com/images/1/1d/Screenshot_start.png
> Resolving wiki.nmr-relax.com (wiki.nmr-relax.com)... 217.116.232.203
> Connecting to wiki.nmr-relax.com
> (wiki.nmr-relax.com)|217.116.232.203|:80... connected.
> HTTP request sent, awaiting response... 404 Not Found
> 2015-10-20 18:10:13 ERROR 404: Not Found.
>
> [edward@localhost wiki]$ wget http://wiki.nmr-relax.com/LocalSettings.php
> --2015-10-20 18:11:24--  http://wiki.nmr-relax.com/LocalSettings.php
> Resolving wiki.nmr-relax.com (wiki.nmr-relax.com)... 217.116.232.203
> Connecting to wiki.nmr-relax.com
> (wiki.nmr-relax.com)|217.116.232.203|:80... connected.
> HTTP request sent, awaiting response... 200 OK
> Length: 0 [text/html]
> Saving to: ‘LocalSettings.php.1’
>
> [ <=>
>
>  ] 0   --.-K/s   in 0s
>
> 2015-10-20 18:11:25 (0.00 B/s) - ‘LocalSettings.php.1’ saved [0/0]
>
> [edward@localhost temp]$ wget http://wiki.nmr-relax.com/cache/.htaccess
> --2015-10-20 18:12:23--  http://wiki.nmr-relax.com/cache/.htaccess
> Resolving wiki.nmr-relax.com (wiki.nmr-relax.com)... 217.116.232.203
> Connecting to wiki.nmr-relax.com
> (wiki.nmr-relax.com)|217.116.232.203|:80... connected.
> HTTP request sent, awaiting response... 403 Forbidden
> 2015-10-20 18:12:23 ERROR 403: Forbidden.
>
> """
>
> This is suspicious!
>
> Regards,
>
> Edward
>
>
>
>
> On 20 October 2015 at 18:08, Troels Emtekær Linnet
>  wrote:
>> Hm.
>>
>> I am looking into this:
>> https://www.mediawiki.org/wiki/Manual:Image_table
>> https://www.mediawiki.org/wiki/Manual:$wgHashedUploadDirectory
>>
>> This did not work
>>
>> I reenabled .htaccess.
>> Did not work.
>>
>> Has the md5 changed?
>>
>> 2015-10-20 17:53 GMT+02:00 Edward d'Auvergne :
>>>
>>> On 20 October 2015 at 17:48, Troels Emtekær Linnet
>>>  wrote:
>>> > Hi.
>>> >
>>> > I have added extension:
>>> > https://www.mediawiki.org/wiki/Extension:Maintenance
>>> > http://wiki.nmr-relax.com/index.php?title=Special:Version
>>> > http://wiki.nmr-relax.com/index.php?title=Special:Maintenance
>>> >
>>> > I have tried:
>>> >
>>> > http://wiki.nmr-relax.com/index.php?title=Special:Maintenance/checkImages
>>> >
>>> > 2_make_surface_plot.png: missing
>>> > About_gui.png: missing
>>> > About_relax.png: missing
>>> > Analysis_mf.png: missing
>>> > Analysis_noe.png: missing
>>> > Analysis_r1.png: missing
>>> > Analysis_r2.png: missing
>>> > Analysis_wizard.png: missing
>>> > Bug_22024_Dw_kex.png: missing
>>> > Bug_22024_Dw_kex_pA.png: missing
>>> > Bug_22024_Dw_pA.png: missing
>>> > Bug_22024_Kex_pA.png: missing
>>> > Bug_22024_R2eff.png: missing
>>> > CPMG_Model_B14_Example_data_disp_1_H.png: missing
>>> > Consistency_testing_200x94.png: missing
>>> > Core_design.png: missing
>>> > Disp_1002_N.png: missing
>>> > Disp_1003_N.png: missing
>>> > Disp_1004_N.png: missing
>>> > Disp_1005_N.png: missing
>>> > Disp_1006_N.png: missing
>>> > Disp_1007_N.png: missing
>>> > Disp_1008_N.png: missing
>>> > Disp_1009_N.png: missing
>>> > Disp_1010_N.png: missing
>>> > Disp_1011_N.png: missing
>>> > Disp_1012_N.png: missing
>>> > Disp_1013_N.png: missing
>>> > Disp_1014_N.png: missing
>>> > Disp_1015_N.png: missing
>>> > Disp_1016_N.png: missing
>>> > Disp_1017_N.png: missing
>>> > Disp_1018_N.png: missing
>>> > Disp_1019_N.png: missing
>>> > Disp_1020_N.png: missing
>>> > Disp_1021_N.png: missing
>>> > Disp_1022_N.png: missing
>>> > Disp_1023_N.png: missing
>>> > Disp_1024_N.png: missing
>>> > Disp_1025_N.png: missing
>>> > Disp_1026_N.png: missing
>>> > Disp_1027_N.png: missing
>>> > Disp_1028_N.png: missing
>>> > Disp_1029_N.png: missing
>>> > Disp_1030_N.png: missing
>>> > Disp_1031_N.png: missing
>>> > Disp_1032_N.png: missing
>>> > Disp_1033_N.png: missing
>>> > Disp_1034_N.png: missing
>>> > Disp_1035_N.png: missing
>>> > Disp_1036_N.png: missing
>>> > Disp_1037_N.png: missing
>>> > Disp_1038_N.png: missing
>>> > Disp_1039_N.png: missing
>>> > Disp_1040_N.png: missing
>>> > Disp_1041_N.png: missing
>>> > Disp_1042_N.png: missing
>>> > Disp_1043_N.png: missing
>>> > Disp_1044_N.png: missing
>>> > Disp_1045_N.png: missing
>>> > Disp_1046_N.png: missing
>>> > Disp_1047_N.png: missing
>>> > Disp_1048_N.png: missing
>>> > Disp_1049_N.png: missing
>>> > Disp_1050_N.png: missing
>>> > Dx_map_1.png: missing
>>> > Fig1_Palmer_Massi_2006.png: missing
>>> > Git_development.png: missing
>>> > License_upload_test.png: missing
>>> > License_upload_test_2.png: missing

Re: Javascript problems on the relax wiki.

2015-10-20 Thread Edward d'Auvergne
On 20 October 2015 at 17:48, Troels Emtekær Linnet
 wrote:
> Hi.
>
> I have added extension:
> https://www.mediawiki.org/wiki/Extension:Maintenance
> http://wiki.nmr-relax.com/index.php?title=Special:Version
> http://wiki.nmr-relax.com/index.php?title=Special:Maintenance
>
> I have tried:
> http://wiki.nmr-relax.com/index.php?title=Special:Maintenance/checkImages
>
> 2_make_surface_plot.png: missing
> About_gui.png: missing
> About_relax.png: missing
> Analysis_mf.png: missing
> Analysis_noe.png: missing
> Analysis_r1.png: missing
> Analysis_r2.png: missing
> Analysis_wizard.png: missing
> Bug_22024_Dw_kex.png: missing
> Bug_22024_Dw_kex_pA.png: missing
> Bug_22024_Dw_pA.png: missing
> Bug_22024_Kex_pA.png: missing
> Bug_22024_R2eff.png: missing
> CPMG_Model_B14_Example_data_disp_1_H.png: missing
> Consistency_testing_200x94.png: missing
> Core_design.png: missing
> Disp_1002_N.png: missing
> Disp_1003_N.png: missing
> Disp_1004_N.png: missing
> Disp_1005_N.png: missing
> Disp_1006_N.png: missing
> Disp_1007_N.png: missing
> Disp_1008_N.png: missing
> Disp_1009_N.png: missing
> Disp_1010_N.png: missing
> Disp_1011_N.png: missing
> Disp_1012_N.png: missing
> Disp_1013_N.png: missing
> Disp_1014_N.png: missing
> Disp_1015_N.png: missing
> Disp_1016_N.png: missing
> Disp_1017_N.png: missing
> Disp_1018_N.png: missing
> Disp_1019_N.png: missing
> Disp_1020_N.png: missing
> Disp_1021_N.png: missing
> Disp_1022_N.png: missing
> Disp_1023_N.png: missing
> Disp_1024_N.png: missing
> Disp_1025_N.png: missing
> Disp_1026_N.png: missing
> Disp_1027_N.png: missing
> Disp_1028_N.png: missing
> Disp_1029_N.png: missing
> Disp_1030_N.png: missing
> Disp_1031_N.png: missing
> Disp_1032_N.png: missing
> Disp_1033_N.png: missing
> Disp_1034_N.png: missing
> Disp_1035_N.png: missing
> Disp_1036_N.png: missing
> Disp_1037_N.png: missing
> Disp_1038_N.png: missing
> Disp_1039_N.png: missing
> Disp_1040_N.png: missing
> Disp_1041_N.png: missing
> Disp_1042_N.png: missing
> Disp_1043_N.png: missing
> Disp_1044_N.png: missing
> Disp_1045_N.png: missing
> Disp_1046_N.png: missing
> Disp_1047_N.png: missing
> Disp_1048_N.png: missing
> Disp_1049_N.png: missing
> Disp_1050_N.png: missing
> Dx_map_1.png: missing
> Fig1_Palmer_Massi_2006.png: missing
> Git_development.png: missing
> License_upload_test.png: missing
> License_upload_test_2.png: missing
> Map_2.png: missing
> Matplotlib_52_N_R1_rho_R2eff_disp.png: missing
> Matplotlib_52_N_R1_rho_R2eff_w_eff.png: missing
> Matplotlib_52_N_R1_rho_theta_sep.png: missing
> Model_free_600x600.png: missing
> Molecular_BioSystems_graphical_abstract.png: missing
> Noe_600x600.png: missing
> Pipe_editor.png: missing
> R1_600x600.png: missing
> R2_600x600.png: missing
> Ramp_Omega_spin-lock_offset.png: missing
> Ramp_w1_ramping_spin-lock_field_strength.png: missing
> Relax_controller.png: missing
> Relax_disp_600x600.png: missing
> Relax_prompt.png: missing
> Results_viewer.png: missing
> Screenshot_start.png: missing
> Spin_viewer.png: missing
> Test_ftp_diff.png: missing
> Test_ftp_mirror.png: missing
> Test_image.png: missing
> Test_jpeg.jpg: missing
> Test_wiki_nmr-relax_com_upload.png: missing
> Ulysses_wiki.png: missing
> Wiki_test.png: missing
> Good images: 0/95
> checkImages ran successfully!

The files are clearly there, but the URLs to them are not working.
Maybe the PHP update broke this rather than the MediaWiki update, and
we need to update/fix the htaccess file :S

Regards,

Edward

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Re: Javascript problems on the relax wiki.

2015-10-20 Thread Edward d'Auvergne
On 20 October 2015 at 18:56, Troels Emtekær Linnet
 wrote:
> Cheers.
>
> I think it was good to get updated. :)
>
> It stays one sharp in mediawiki.
>
> Hope someone finds this thread.
>
> :)

It should receive a few Google hits - I think we've covered enough key
words.  Anyway, I've now reinstalled and reactivated all extensions.
There are a few changes:

1)  The collapsible NavFrame elements work!  Well, only partly.  The
"[ hide ]" and "[ show ]" text is visible now.  The 'show' link works
and opens the  box.  However 'hide' does not cause the  box
to collapse.  See the test page at
http://wiki.nmr-relax.com/Javascript_testing .  I have to investigate
this more.  At least the MediaWiki upgrade allows these links to be
injected into the  box via JavaScript, so bugs in the MediaWiki
1.21.1 version was clearly the problem.


2)  MathJax is abandoned, so unfortunately we now have to use
SimpleMathJax (https://www.mediawiki.org/wiki/Extension:MathJax vs.
https://www.mediawiki.org/wiki/Extension:SimpleMathJax).  This means
that only  tags are supported, and all LaTeX maths between $...$
signs must be replaced :(  A few relaxation dispersion model articles
will need updating, in due time.


3)  Scribunto is still not working
(https://www.mediawiki.org/wiki/Extension:Scribunto).  See the test
page:

http://wiki.nmr-relax.com/Temp_lua_testing_page

This dumps the 'lua-error.log' file in the base directory, which
simply says 'Segmentation fault'.  The page itself has the error "Lua
error: Internal error: The interpreter exited with status 139.  No
further details are available."  This is the same problem as before
the update.  I have to investigate this more :(


4)  We'll see what else pops up now on the wiki, but I'll looking good to me.


Thank you again for updating the wiki infrastructure!  It is much appreciated.

Cheers,

Edward

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Re: Javascript problems on the relax wiki.

2015-10-20 Thread Edward d'Auvergne
On 20 October 2015 at 17:22, Troels Emtekær Linnet
 wrote:
> These are commented out:
>
> #20151020 $wgArticlePath = "/$1";
> #20151020 $wgUsePathInfo = true;
>
> This now works
>
> http://wiki.nmr-relax.com
> http://wiki.nmr-relax.com/index.php?title=Main_Page
>
> Still no luck with images
> http://wiki.nmr-relax.com/index.php?title=File:Screenshot_start.png

I'm looking into the image problem too.  I'll report back if I find
something, and let you make the changes over ftp.  There's a risk of
overwriting the LocalSettings.php file if we work on it
simultaneously.

Cheers,

Edward

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Re: Javascript problems on the relax wiki.

2015-10-20 Thread Troels Emtekær Linnet
Ehh.

There is a .htaccess file in the images folder

Before:
/Users/tlinnet/Desktop/wiki.nmr-relax.com_backup/images
tlinnet@linmac:images$ cat .htaccess
# Protect against bug 28235

RewriteEngine On
RewriteCond %{QUERY_STRING} \.[^\\/:*?\x22<>|%]+(#|\?|$) [nocase]
RewriteRule . - [forbidden]



/Users/tlinnet/Desktop/wiki.nmr-relax.com/images
tlinnet@linmac:images$ cat .htaccess
# Protect against bug 28235

RewriteEngine On
RewriteCond %{QUERY_STRING} \.[^\\/:*?\x22<>|%]+(#|\?|$) [nocase]
RewriteRule . - [forbidden]
# Fix for bug T64289
Options +FollowSymLinks

tlinnet@linmac

2015-10-20 18:37 GMT+02:00 Troels Emtekær Linnet :

> Yup.
>
> I have now enabled all standard extensions, which was avaiable in the
> extension folder.
>
> I give up here...
>
> I dont know if the file permissions is correct?
> Or the md5 hash has changes, or an image table is gone, or something with
> apache...
>
>
>
> 2015-10-20 18:31 GMT+02:00 Edward d'Auvergne :
>
>> This is a tough one!
>>
>> On 20 October 2015 at 18:16, Edward d'Auvergne 
>> wrote:
>> > I currently know absolutely nothing about .htaccess files, but might
>> > this offer a solution:
>> > http://www.fvue.nl/wiki/MediaWiki_error:_No_input_file_specified
>> >
>> > Regards,
>> >
>> > Edward
>> >
>> >
>> > On 20 October 2015 at 18:13, Edward d'Auvergne 
>> wrote:
>> >> I think this is something to do with .htaccess, as it is clearly
>> >> nothing to do with the MediaWiki part:
>> >>
>> >> """
>> >> [edward@localhost wiki]$ wget
>> >> http://wiki.nmr-relax.com/images/1/1d/Screenshot_start.png
>> >> --2015-10-20 18:10:12--
>> >> http://wiki.nmr-relax.com/images/1/1d/Screenshot_start.png
>> >> Resolving wiki.nmr-relax.com (wiki.nmr-relax.com)... 217.116.232.203
>> >> Connecting to wiki.nmr-relax.com
>> >> (wiki.nmr-relax.com)|217.116.232.203|:80... connected.
>> >> HTTP request sent, awaiting response... 404 Not Found
>> >> 2015-10-20 18:10:13 ERROR 404: Not Found.
>> >>
>> >> [edward@localhost wiki]$ wget
>> http://wiki.nmr-relax.com/LocalSettings.php
>> >> --2015-10-20 18:11:24--  http://wiki.nmr-relax.com/LocalSettings.php
>> >> Resolving wiki.nmr-relax.com (wiki.nmr-relax.com)... 217.116.232.203
>> >> Connecting to wiki.nmr-relax.com
>> >> (wiki.nmr-relax.com)|217.116.232.203|:80... connected.
>> >> HTTP request sent, awaiting response... 200 OK
>> >> Length: 0 [text/html]
>> >> Saving to: ‘LocalSettings.php.1’
>> >>
>> >> [ <=>
>> >>
>> >>  ] 0   --.-K/s   in 0s
>> >>
>> >> 2015-10-20 18:11:25 (0.00 B/s) - ‘LocalSettings.php.1’ saved [0/0]
>> >>
>> >> [edward@localhost temp]$ wget
>> http://wiki.nmr-relax.com/cache/.htaccess
>> >> --2015-10-20 18:12:23--  http://wiki.nmr-relax.com/cache/.htaccess
>> >> Resolving wiki.nmr-relax.com (wiki.nmr-relax.com)... 217.116.232.203
>> >> Connecting to wiki.nmr-relax.com
>> >> (wiki.nmr-relax.com)|217.116.232.203|:80... connected.
>> >> HTTP request sent, awaiting response... 403 Forbidden
>> >> 2015-10-20 18:12:23 ERROR 403: Forbidden.
>> >>
>> >> """
>> >>
>> >> This is suspicious!
>> >>
>> >> Regards,
>> >>
>> >> Edward
>> >>
>> >>
>> >>
>> >>
>> >> On 20 October 2015 at 18:08, Troels Emtekær Linnet
>> >>  wrote:
>> >>> Hm.
>> >>>
>> >>> I am looking into this:
>> >>> https://www.mediawiki.org/wiki/Manual:Image_table
>> >>> https://www.mediawiki.org/wiki/Manual:$wgHashedUploadDirectory
>> >>>
>> >>> This did not work
>> >>>
>> >>> I reenabled .htaccess.
>> >>> Did not work.
>> >>>
>> >>> Has the md5 changed?
>> >>>
>> >>> 2015-10-20 17:53 GMT+02:00 Edward d'Auvergne :
>> 
>>  On 20 October 2015 at 17:48, Troels Emtekær Linnet
>>   wrote:
>>  > Hi.
>>  >
>>  > I have added extension:
>>  > https://www.mediawiki.org/wiki/Extension:Maintenance
>>  > http://wiki.nmr-relax.com/index.php?title=Special:Version
>>  > http://wiki.nmr-relax.com/index.php?title=Special:Maintenance
>>  >
>>  > I have tried:
>>  >
>>  >
>> http://wiki.nmr-relax.com/index.php?title=Special:Maintenance/checkImages
>>  >
>>  > 2_make_surface_plot.png: missing
>>  > About_gui.png: missing
>>  > About_relax.png: missing
>>  > Analysis_mf.png: missing
>>  > Analysis_noe.png: missing
>>  > Analysis_r1.png: missing
>>  > Analysis_r2.png: missing
>>  > Analysis_wizard.png: missing
>>  > Bug_22024_Dw_kex.png: missing
>>  > Bug_22024_Dw_kex_pA.png: missing
>>  > Bug_22024_Dw_pA.png: missing
>>  > Bug_22024_Kex_pA.png: missing
>>  > Bug_22024_R2eff.png: missing
>>  > CPMG_Model_B14_Example_data_disp_1_H.png: missing
>>  > Consistency_testing_200x94.png: missing
>>  > Core_design.png: missing
>>  > Disp_1002_N.png: missing
>>  > Disp_1003_N.png: missing
>>  > Disp_1004_N.png: missing
>>  > Disp_1005_N.png: missing
>>  > 

Re: Javascript problems on the relax wiki.

2015-10-20 Thread Edward d'Auvergne
I'll keep looking, and try to learn the .htaccess rules.  There are
plenty of people on the internet with the same problem, so a solution
will be out there.  Most are saying it is the .htaccess file.

Cheers,

Edward

On 20 October 2015 at 18:37, Troels Emtekær Linnet
 wrote:
> Yup.
>
> I have now enabled all standard extensions, which was avaiable in the
> extension folder.
>
> I give up here...
>
> I dont know if the file permissions is correct?
> Or the md5 hash has changes, or an image table is gone, or something with
> apache...
>
>
>
> 2015-10-20 18:31 GMT+02:00 Edward d'Auvergne :
>>
>> This is a tough one!
>>
>> On 20 October 2015 at 18:16, Edward d'Auvergne 
>> wrote:
>> > I currently know absolutely nothing about .htaccess files, but might
>> > this offer a solution:
>> > http://www.fvue.nl/wiki/MediaWiki_error:_No_input_file_specified
>> >
>> > Regards,
>> >
>> > Edward
>> >
>> >
>> > On 20 October 2015 at 18:13, Edward d'Auvergne 
>> > wrote:
>> >> I think this is something to do with .htaccess, as it is clearly
>> >> nothing to do with the MediaWiki part:
>> >>
>> >> """
>> >> [edward@localhost wiki]$ wget
>> >> http://wiki.nmr-relax.com/images/1/1d/Screenshot_start.png
>> >> --2015-10-20 18:10:12--
>> >> http://wiki.nmr-relax.com/images/1/1d/Screenshot_start.png
>> >> Resolving wiki.nmr-relax.com (wiki.nmr-relax.com)... 217.116.232.203
>> >> Connecting to wiki.nmr-relax.com
>> >> (wiki.nmr-relax.com)|217.116.232.203|:80... connected.
>> >> HTTP request sent, awaiting response... 404 Not Found
>> >> 2015-10-20 18:10:13 ERROR 404: Not Found.
>> >>
>> >> [edward@localhost wiki]$ wget
>> >> http://wiki.nmr-relax.com/LocalSettings.php
>> >> --2015-10-20 18:11:24--  http://wiki.nmr-relax.com/LocalSettings.php
>> >> Resolving wiki.nmr-relax.com (wiki.nmr-relax.com)... 217.116.232.203
>> >> Connecting to wiki.nmr-relax.com
>> >> (wiki.nmr-relax.com)|217.116.232.203|:80... connected.
>> >> HTTP request sent, awaiting response... 200 OK
>> >> Length: 0 [text/html]
>> >> Saving to: ‘LocalSettings.php.1’
>> >>
>> >> [ <=>
>> >>
>> >>  ] 0   --.-K/s   in 0s
>> >>
>> >> 2015-10-20 18:11:25 (0.00 B/s) - ‘LocalSettings.php.1’ saved [0/0]
>> >>
>> >> [edward@localhost temp]$ wget http://wiki.nmr-relax.com/cache/.htaccess
>> >> --2015-10-20 18:12:23--  http://wiki.nmr-relax.com/cache/.htaccess
>> >> Resolving wiki.nmr-relax.com (wiki.nmr-relax.com)... 217.116.232.203
>> >> Connecting to wiki.nmr-relax.com
>> >> (wiki.nmr-relax.com)|217.116.232.203|:80... connected.
>> >> HTTP request sent, awaiting response... 403 Forbidden
>> >> 2015-10-20 18:12:23 ERROR 403: Forbidden.
>> >>
>> >> """
>> >>
>> >> This is suspicious!
>> >>
>> >> Regards,
>> >>
>> >> Edward
>> >>
>> >>
>> >>
>> >>
>> >> On 20 October 2015 at 18:08, Troels Emtekær Linnet
>> >>  wrote:
>> >>> Hm.
>> >>>
>> >>> I am looking into this:
>> >>> https://www.mediawiki.org/wiki/Manual:Image_table
>> >>> https://www.mediawiki.org/wiki/Manual:$wgHashedUploadDirectory
>> >>>
>> >>> This did not work
>> >>>
>> >>> I reenabled .htaccess.
>> >>> Did not work.
>> >>>
>> >>> Has the md5 changed?
>> >>>
>> >>> 2015-10-20 17:53 GMT+02:00 Edward d'Auvergne :
>> 
>>  On 20 October 2015 at 17:48, Troels Emtekær Linnet
>>   wrote:
>>  > Hi.
>>  >
>>  > I have added extension:
>>  > https://www.mediawiki.org/wiki/Extension:Maintenance
>>  > http://wiki.nmr-relax.com/index.php?title=Special:Version
>>  > http://wiki.nmr-relax.com/index.php?title=Special:Maintenance
>>  >
>>  > I have tried:
>>  >
>>  >
>>  > http://wiki.nmr-relax.com/index.php?title=Special:Maintenance/checkImages
>>  >
>>  > 2_make_surface_plot.png: missing
>>  > About_gui.png: missing
>>  > About_relax.png: missing
>>  > Analysis_mf.png: missing
>>  > Analysis_noe.png: missing
>>  > Analysis_r1.png: missing
>>  > Analysis_r2.png: missing
>>  > Analysis_wizard.png: missing
>>  > Bug_22024_Dw_kex.png: missing
>>  > Bug_22024_Dw_kex_pA.png: missing
>>  > Bug_22024_Dw_pA.png: missing
>>  > Bug_22024_Kex_pA.png: missing
>>  > Bug_22024_R2eff.png: missing
>>  > CPMG_Model_B14_Example_data_disp_1_H.png: missing
>>  > Consistency_testing_200x94.png: missing
>>  > Core_design.png: missing
>>  > Disp_1002_N.png: missing
>>  > Disp_1003_N.png: missing
>>  > Disp_1004_N.png: missing
>>  > Disp_1005_N.png: missing
>>  > Disp_1006_N.png: missing
>>  > Disp_1007_N.png: missing
>>  > Disp_1008_N.png: missing
>>  > Disp_1009_N.png: missing
>>  > Disp_1010_N.png: missing
>>  > Disp_1011_N.png: missing
>>  > Disp_1012_N.png: missing
>>  > Disp_1013_N.png: missing
>>  > Disp_1014_N.png: missing
>>  > Disp_1015_N.png: missing
>>  > 

Re: Javascript problems on the relax wiki.

2015-10-20 Thread Troels Emtekær Linnet
These are commented out:

#20151020 $wgArticlePath = "/$1";
#20151020 $wgUsePathInfo = true;

This now works

http://wiki.nmr-relax.com
http://wiki.nmr-relax.com/index.php?title=Main_Page

Still no luck with images
http://wiki.nmr-relax.com/index.php?title=File:Screenshot_start.png

2015-10-20 17:17 GMT+02:00 Troels Emtekær Linnet :

> Homepage slide gallery is now working.
>
> I try to disable htaccess
>
> .htaccess renamed to htaccess
>
>
>
> 2015-10-20 17:12 GMT+02:00 Troels Emtekær Linnet :
>
>> http://wiki.nmr-relax.com/Phpinfo.php
>>
>> Is uploaded.
>>
>> I now try to unlock database.
>>
>> So I can try:
>> http://wiki.nmr-relax.com/Phpinfo.php?action=purge
>>
>>
>>
>> 2015-10-20 17:08 GMT+02:00 Troels Emtekær Linnet :
>>
>>> Hi Edward.
>>>
>>> I have uploaded:
>>>
>>> skins/common with favicon and ulysses images
>>> images/*
>>>
>>> Currently, this does not work
>>>
>>> http://wiki.nmr-relax.com/File:Analysis_r1.png
>>> http://wiki.nmr-relax.com/images/9/96/Analysis_r1.png
>>>
>>> 2015-10-20 16:55 GMT+02:00 Edward d'Auvergne :
>>>
 On 20 October 2015 at 16:44, Troels Emtekær Linnet
  wrote:
 > Hi Edward.
 >
 > We are up:
 >
 > http://wiki.nmr-relax.com/Main_Page
 > http://wiki.nmr-relax.com/Special:Version
 > http://wiki.nmr-relax.com/Javascript_testing
 >
 > The wiki is currently locked for editing:
 >
 > $wgReadOnly = 'Upgrading to MediaWiki 1.25.3';
 >
 > I will now upload images

 I'm watching the changes, and capturing some of the steps on the
 wayback machine (for curiosity):


 https://web.archive.org/web/20151020142128/http://wiki.nmr-relax.com/Main_Page

 https://web.archive.org/web/20151020143925/http://wiki.nmr-relax.com/Main_Page

 https://web.archive.org/web/20151020143930/http://wiki.nmr-relax.com/Special:Version

 I'm also keen to see what happens on this test page:

 http://wiki.nmr-relax.com/Temp_lua_testing_page

 If this upgrade gets Lua to work, then maybe this thread can be
 resurrected:

 http://thread.gmane.org/gmane.science.nmr.relax.devel/7046

 And Wikipedia Template:Infobox elements (using the Scribunto
 extension) can be added for all the relax releases.

 Cheers!

 Edward

>>>
>>>
>>
>
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Re: Javascript problems on the relax wiki.

2015-10-20 Thread Troels Emtekær Linnet
Hm.

I am looking into this:
https://www.mediawiki.org/wiki/Manual:Image_table
https://www.mediawiki.org/wiki/Manual:$wgHashedUploadDirectory

This did not work

I reenabled .htaccess.
Did not work.

Has the md5 changed?

2015-10-20 17:53 GMT+02:00 Edward d'Auvergne :

> On 20 October 2015 at 17:48, Troels Emtekær Linnet
>  wrote:
> > Hi.
> >
> > I have added extension:
> > https://www.mediawiki.org/wiki/Extension:Maintenance
> > http://wiki.nmr-relax.com/index.php?title=Special:Version
> > http://wiki.nmr-relax.com/index.php?title=Special:Maintenance
> >
> > I have tried:
> >
> http://wiki.nmr-relax.com/index.php?title=Special:Maintenance/checkImages
> >
> > 2_make_surface_plot.png: missing
> > About_gui.png: missing
> > About_relax.png: missing
> > Analysis_mf.png: missing
> > Analysis_noe.png: missing
> > Analysis_r1.png: missing
> > Analysis_r2.png: missing
> > Analysis_wizard.png: missing
> > Bug_22024_Dw_kex.png: missing
> > Bug_22024_Dw_kex_pA.png: missing
> > Bug_22024_Dw_pA.png: missing
> > Bug_22024_Kex_pA.png: missing
> > Bug_22024_R2eff.png: missing
> > CPMG_Model_B14_Example_data_disp_1_H.png: missing
> > Consistency_testing_200x94.png: missing
> > Core_design.png: missing
> > Disp_1002_N.png: missing
> > Disp_1003_N.png: missing
> > Disp_1004_N.png: missing
> > Disp_1005_N.png: missing
> > Disp_1006_N.png: missing
> > Disp_1007_N.png: missing
> > Disp_1008_N.png: missing
> > Disp_1009_N.png: missing
> > Disp_1010_N.png: missing
> > Disp_1011_N.png: missing
> > Disp_1012_N.png: missing
> > Disp_1013_N.png: missing
> > Disp_1014_N.png: missing
> > Disp_1015_N.png: missing
> > Disp_1016_N.png: missing
> > Disp_1017_N.png: missing
> > Disp_1018_N.png: missing
> > Disp_1019_N.png: missing
> > Disp_1020_N.png: missing
> > Disp_1021_N.png: missing
> > Disp_1022_N.png: missing
> > Disp_1023_N.png: missing
> > Disp_1024_N.png: missing
> > Disp_1025_N.png: missing
> > Disp_1026_N.png: missing
> > Disp_1027_N.png: missing
> > Disp_1028_N.png: missing
> > Disp_1029_N.png: missing
> > Disp_1030_N.png: missing
> > Disp_1031_N.png: missing
> > Disp_1032_N.png: missing
> > Disp_1033_N.png: missing
> > Disp_1034_N.png: missing
> > Disp_1035_N.png: missing
> > Disp_1036_N.png: missing
> > Disp_1037_N.png: missing
> > Disp_1038_N.png: missing
> > Disp_1039_N.png: missing
> > Disp_1040_N.png: missing
> > Disp_1041_N.png: missing
> > Disp_1042_N.png: missing
> > Disp_1043_N.png: missing
> > Disp_1044_N.png: missing
> > Disp_1045_N.png: missing
> > Disp_1046_N.png: missing
> > Disp_1047_N.png: missing
> > Disp_1048_N.png: missing
> > Disp_1049_N.png: missing
> > Disp_1050_N.png: missing
> > Dx_map_1.png: missing
> > Fig1_Palmer_Massi_2006.png: missing
> > Git_development.png: missing
> > License_upload_test.png: missing
> > License_upload_test_2.png: missing
> > Map_2.png: missing
> > Matplotlib_52_N_R1_rho_R2eff_disp.png: missing
> > Matplotlib_52_N_R1_rho_R2eff_w_eff.png: missing
> > Matplotlib_52_N_R1_rho_theta_sep.png: missing
> > Model_free_600x600.png: missing
> > Molecular_BioSystems_graphical_abstract.png: missing
> > Noe_600x600.png: missing
> > Pipe_editor.png: missing
> > R1_600x600.png: missing
> > R2_600x600.png: missing
> > Ramp_Omega_spin-lock_offset.png: missing
> > Ramp_w1_ramping_spin-lock_field_strength.png: missing
> > Relax_controller.png: missing
> > Relax_disp_600x600.png: missing
> > Relax_prompt.png: missing
> > Results_viewer.png: missing
> > Screenshot_start.png: missing
> > Spin_viewer.png: missing
> > Test_ftp_diff.png: missing
> > Test_ftp_mirror.png: missing
> > Test_image.png: missing
> > Test_jpeg.jpg: missing
> > Test_wiki_nmr-relax_com_upload.png: missing
> > Ulysses_wiki.png: missing
> > Wiki_test.png: missing
> > Good images: 0/95
> > checkImages ran successfully!
>
> The files are clearly there, but the URLs to them are not working.
> Maybe the PHP update broke this rather than the MediaWiki update, and
> we need to update/fix the htaccess file :S
>
> Regards,
>
> Edward
>
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Re: Javascript problems on the relax wiki.

2015-10-20 Thread Troels Emtekær Linnet
Yup.

I have now enabled all standard extensions, which was avaiable in the
extension folder.

I give up here...

I dont know if the file permissions is correct?
Or the md5 hash has changes, or an image table is gone, or something with
apache...



2015-10-20 18:31 GMT+02:00 Edward d'Auvergne :

> This is a tough one!
>
> On 20 October 2015 at 18:16, Edward d'Auvergne 
> wrote:
> > I currently know absolutely nothing about .htaccess files, but might
> > this offer a solution:
> > http://www.fvue.nl/wiki/MediaWiki_error:_No_input_file_specified
> >
> > Regards,
> >
> > Edward
> >
> >
> > On 20 October 2015 at 18:13, Edward d'Auvergne 
> wrote:
> >> I think this is something to do with .htaccess, as it is clearly
> >> nothing to do with the MediaWiki part:
> >>
> >> """
> >> [edward@localhost wiki]$ wget
> >> http://wiki.nmr-relax.com/images/1/1d/Screenshot_start.png
> >> --2015-10-20 18:10:12--
> >> http://wiki.nmr-relax.com/images/1/1d/Screenshot_start.png
> >> Resolving wiki.nmr-relax.com (wiki.nmr-relax.com)... 217.116.232.203
> >> Connecting to wiki.nmr-relax.com
> >> (wiki.nmr-relax.com)|217.116.232.203|:80... connected.
> >> HTTP request sent, awaiting response... 404 Not Found
> >> 2015-10-20 18:10:13 ERROR 404: Not Found.
> >>
> >> [edward@localhost wiki]$ wget
> http://wiki.nmr-relax.com/LocalSettings.php
> >> --2015-10-20 18:11:24--  http://wiki.nmr-relax.com/LocalSettings.php
> >> Resolving wiki.nmr-relax.com (wiki.nmr-relax.com)... 217.116.232.203
> >> Connecting to wiki.nmr-relax.com
> >> (wiki.nmr-relax.com)|217.116.232.203|:80... connected.
> >> HTTP request sent, awaiting response... 200 OK
> >> Length: 0 [text/html]
> >> Saving to: ‘LocalSettings.php.1’
> >>
> >> [ <=>
> >>
> >>  ] 0   --.-K/s   in 0s
> >>
> >> 2015-10-20 18:11:25 (0.00 B/s) - ‘LocalSettings.php.1’ saved [0/0]
> >>
> >> [edward@localhost temp]$ wget http://wiki.nmr-relax.com/cache/.htaccess
> >> --2015-10-20 18:12:23--  http://wiki.nmr-relax.com/cache/.htaccess
> >> Resolving wiki.nmr-relax.com (wiki.nmr-relax.com)... 217.116.232.203
> >> Connecting to wiki.nmr-relax.com
> >> (wiki.nmr-relax.com)|217.116.232.203|:80... connected.
> >> HTTP request sent, awaiting response... 403 Forbidden
> >> 2015-10-20 18:12:23 ERROR 403: Forbidden.
> >>
> >> """
> >>
> >> This is suspicious!
> >>
> >> Regards,
> >>
> >> Edward
> >>
> >>
> >>
> >>
> >> On 20 October 2015 at 18:08, Troels Emtekær Linnet
> >>  wrote:
> >>> Hm.
> >>>
> >>> I am looking into this:
> >>> https://www.mediawiki.org/wiki/Manual:Image_table
> >>> https://www.mediawiki.org/wiki/Manual:$wgHashedUploadDirectory
> >>>
> >>> This did not work
> >>>
> >>> I reenabled .htaccess.
> >>> Did not work.
> >>>
> >>> Has the md5 changed?
> >>>
> >>> 2015-10-20 17:53 GMT+02:00 Edward d'Auvergne :
> 
>  On 20 October 2015 at 17:48, Troels Emtekær Linnet
>   wrote:
>  > Hi.
>  >
>  > I have added extension:
>  > https://www.mediawiki.org/wiki/Extension:Maintenance
>  > http://wiki.nmr-relax.com/index.php?title=Special:Version
>  > http://wiki.nmr-relax.com/index.php?title=Special:Maintenance
>  >
>  > I have tried:
>  >
>  >
> http://wiki.nmr-relax.com/index.php?title=Special:Maintenance/checkImages
>  >
>  > 2_make_surface_plot.png: missing
>  > About_gui.png: missing
>  > About_relax.png: missing
>  > Analysis_mf.png: missing
>  > Analysis_noe.png: missing
>  > Analysis_r1.png: missing
>  > Analysis_r2.png: missing
>  > Analysis_wizard.png: missing
>  > Bug_22024_Dw_kex.png: missing
>  > Bug_22024_Dw_kex_pA.png: missing
>  > Bug_22024_Dw_pA.png: missing
>  > Bug_22024_Kex_pA.png: missing
>  > Bug_22024_R2eff.png: missing
>  > CPMG_Model_B14_Example_data_disp_1_H.png: missing
>  > Consistency_testing_200x94.png: missing
>  > Core_design.png: missing
>  > Disp_1002_N.png: missing
>  > Disp_1003_N.png: missing
>  > Disp_1004_N.png: missing
>  > Disp_1005_N.png: missing
>  > Disp_1006_N.png: missing
>  > Disp_1007_N.png: missing
>  > Disp_1008_N.png: missing
>  > Disp_1009_N.png: missing
>  > Disp_1010_N.png: missing
>  > Disp_1011_N.png: missing
>  > Disp_1012_N.png: missing
>  > Disp_1013_N.png: missing
>  > Disp_1014_N.png: missing
>  > Disp_1015_N.png: missing
>  > Disp_1016_N.png: missing
>  > Disp_1017_N.png: missing
>  > Disp_1018_N.png: missing
>  > Disp_1019_N.png: missing
>  > Disp_1020_N.png: missing
>  > Disp_1021_N.png: missing
>  > Disp_1022_N.png: missing
>  > Disp_1023_N.png: missing
>  > Disp_1024_N.png: missing
>  > Disp_1025_N.png: missing
>  > Disp_1026_N.png: missing
>  > Disp_1027_N.png: missing
>  > Disp_1028_N.png: missing
>  > Disp_1029_N.png: missing
> 

Re: Javascript problems on the relax wiki.

2015-10-20 Thread Edward d'Auvergne
On 20 October 2015 at 18:49, Troels Emtekær Linnet
 wrote:
> I think you can leave the "old" version of .htaccess
>
> # Protect against bug 28235
> 
> RewriteEngine On
> RewriteCond %{QUERY_STRING} \.[^\\/:*?\x22<>|%]+(#|\?|$) [nocase]
> RewriteRule . - [forbidden]
> # Fix for bug T64289
> # Options +FollowSymLinks
> 
>
> The bug is here:
> https://phabricator.wikimedia.org/T64289
>
> Some developer must have added the Symlinks

I'll let you set up the .htaccess file and test it.  Note that without
.htacess, everything appears to work fine.  Ok, I see the images with
the modified .htaccess file too.  But the script at
http://wiki.nmr-relax.com/Special:Maintenance/checkImages isn't happy.
Oh well, it works :)  Thanks a lot for all of this!

Regards,

Edward

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Re: Javascript problems on the relax wiki.

2015-10-20 Thread Troels Emtekær Linnet
Cheers.

I think it was good to get updated. :)

It stays one sharp in mediawiki.

Hope someone finds this thread.

:)

2015-10-20 18:54 GMT+02:00 Edward d'Auvergne :

> On 20 October 2015 at 18:49, Troels Emtekær Linnet
>  wrote:
> > I think you can leave the "old" version of .htaccess
> >
> > # Protect against bug 28235
> > 
> > RewriteEngine On
> > RewriteCond %{QUERY_STRING} \.[^\\/:*?\x22<>|%]+(#|\?|$) [nocase]
> > RewriteRule . - [forbidden]
> > # Fix for bug T64289
> > # Options +FollowSymLinks
> > 
> >
> > The bug is here:
> > https://phabricator.wikimedia.org/T64289
> >
> > Some developer must have added the Symlinks
>
> I'll let you set up the .htaccess file and test it.  Note that without
> .htacess, everything appears to work fine.  Ok, I see the images with
> the modified .htaccess file too.  But the script at
> http://wiki.nmr-relax.com/Special:Maintenance/checkImages isn't happy.
> Oh well, it works :)  Thanks a lot for all of this!
>
> Regards,
>
> Edward
>
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Re: Javascript problems on the relax wiki.

2015-10-20 Thread Troels Emtekær Linnet
Hi Edward.

We are up:

http://wiki.nmr-relax.com/Main_Page
http://wiki.nmr-relax.com/Special:Version
http://wiki.nmr-relax.com/Javascript_testing

The wiki is currently locked for editing:

$wgReadOnly = 'Upgrading to MediaWiki 1.25.3';

I will now upload images

Best
Troels


2015-10-20 16:38 GMT+02:00 Edward d'Auvergne :

> On 20 October 2015 at 16:32, Troels Emtekær Linnet
>  wrote:
> > Hi Edward.
> >
> > 1) I downloaded a backup of old wiki and made MYSQL dump
> > 2) I downloaded and unpacked new wiki
> > 3) At server, I deleted old files, and changed PHP version to 5.6
> > 4) I uploaded new wiki files to server
> > 5) I copied the old Localsettings file and .htacess files
> > 6) I modified Localsettings, and commented out all all extensions
> > 7) I uploaded the Localsettings file, and .htaccess
> > 8) I went to: http://wiki.nmr-relax.com/mw-config/  to update.
> >
> > This is where I am at the moment
> >
> > I will have to:
> >
> > Upload image files
> > Update extensions
>
> Awesome!  It's progressing well.  We don't have to do all the
> extensions all at once.  And I can install a couple of them, using the
> newest or most stable versions, if you wish.
>
> Cheers,
>
> Edward
>
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Re: Javascript problems on the relax wiki.

2015-10-20 Thread Edward d'Auvergne
On 20 October 2015 at 16:32, Troels Emtekær Linnet
 wrote:
> Hi Edward.
>
> 1) I downloaded a backup of old wiki and made MYSQL dump
> 2) I downloaded and unpacked new wiki
> 3) At server, I deleted old files, and changed PHP version to 5.6
> 4) I uploaded new wiki files to server
> 5) I copied the old Localsettings file and .htacess files
> 6) I modified Localsettings, and commented out all all extensions
> 7) I uploaded the Localsettings file, and .htaccess
> 8) I went to: http://wiki.nmr-relax.com/mw-config/  to update.
>
> This is where I am at the moment
>
> I will have to:
>
> Upload image files
> Update extensions

Awesome!  It's progressing well.  We don't have to do all the
extensions all at once.  And I can install a couple of them, using the
newest or most stable versions, if you wish.

Cheers,

Edward

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Re: Javascript problems on the relax wiki.

2015-10-20 Thread Troels Emtekær Linnet
I am looking into this:

https://www.mediawiki.org/wiki/Manual:Maintenance_scripts

2015-10-20 17:28 GMT+02:00 Edward d'Auvergne :

> On 20 October 2015 at 17:22, Troels Emtekær Linnet
>  wrote:
> > These are commented out:
> >
> > #20151020 $wgArticlePath = "/$1";
> > #20151020 $wgUsePathInfo = true;
> >
> > This now works
> >
> > http://wiki.nmr-relax.com
> > http://wiki.nmr-relax.com/index.php?title=Main_Page
> >
> > Still no luck with images
> > http://wiki.nmr-relax.com/index.php?title=File:Screenshot_start.png
>
> I'm looking into the image problem too.  I'll report back if I find
> something, and let you make the changes over ftp.  There's a risk of
> overwriting the LocalSettings.php file if we work on it
> simultaneously.
>
> Cheers,
>
> Edward
>
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Re: Javascript problems on the relax wiki.

2015-10-20 Thread Edward d'Auvergne
On 20 October 2015 at 17:29, Troels Emtekær Linnet
 wrote:
> I am looking into this:
>
> https://www.mediawiki.org/wiki/Manual:Maintenance_scripts

I'm running an ftp dump at the moment, and am looking into possible
file permission issues.

Regards,

Edward

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Re: Javascript problems on the relax wiki.

2015-10-20 Thread Edward d'Auvergne
This is a tough one!

On 20 October 2015 at 18:16, Edward d'Auvergne  wrote:
> I currently know absolutely nothing about .htaccess files, but might
> this offer a solution:
> http://www.fvue.nl/wiki/MediaWiki_error:_No_input_file_specified
>
> Regards,
>
> Edward
>
>
> On 20 October 2015 at 18:13, Edward d'Auvergne  wrote:
>> I think this is something to do with .htaccess, as it is clearly
>> nothing to do with the MediaWiki part:
>>
>> """
>> [edward@localhost wiki]$ wget
>> http://wiki.nmr-relax.com/images/1/1d/Screenshot_start.png
>> --2015-10-20 18:10:12--
>> http://wiki.nmr-relax.com/images/1/1d/Screenshot_start.png
>> Resolving wiki.nmr-relax.com (wiki.nmr-relax.com)... 217.116.232.203
>> Connecting to wiki.nmr-relax.com
>> (wiki.nmr-relax.com)|217.116.232.203|:80... connected.
>> HTTP request sent, awaiting response... 404 Not Found
>> 2015-10-20 18:10:13 ERROR 404: Not Found.
>>
>> [edward@localhost wiki]$ wget http://wiki.nmr-relax.com/LocalSettings.php
>> --2015-10-20 18:11:24--  http://wiki.nmr-relax.com/LocalSettings.php
>> Resolving wiki.nmr-relax.com (wiki.nmr-relax.com)... 217.116.232.203
>> Connecting to wiki.nmr-relax.com
>> (wiki.nmr-relax.com)|217.116.232.203|:80... connected.
>> HTTP request sent, awaiting response... 200 OK
>> Length: 0 [text/html]
>> Saving to: ‘LocalSettings.php.1’
>>
>> [ <=>
>>
>>  ] 0   --.-K/s   in 0s
>>
>> 2015-10-20 18:11:25 (0.00 B/s) - ‘LocalSettings.php.1’ saved [0/0]
>>
>> [edward@localhost temp]$ wget http://wiki.nmr-relax.com/cache/.htaccess
>> --2015-10-20 18:12:23--  http://wiki.nmr-relax.com/cache/.htaccess
>> Resolving wiki.nmr-relax.com (wiki.nmr-relax.com)... 217.116.232.203
>> Connecting to wiki.nmr-relax.com
>> (wiki.nmr-relax.com)|217.116.232.203|:80... connected.
>> HTTP request sent, awaiting response... 403 Forbidden
>> 2015-10-20 18:12:23 ERROR 403: Forbidden.
>>
>> """
>>
>> This is suspicious!
>>
>> Regards,
>>
>> Edward
>>
>>
>>
>>
>> On 20 October 2015 at 18:08, Troels Emtekær Linnet
>>  wrote:
>>> Hm.
>>>
>>> I am looking into this:
>>> https://www.mediawiki.org/wiki/Manual:Image_table
>>> https://www.mediawiki.org/wiki/Manual:$wgHashedUploadDirectory
>>>
>>> This did not work
>>>
>>> I reenabled .htaccess.
>>> Did not work.
>>>
>>> Has the md5 changed?
>>>
>>> 2015-10-20 17:53 GMT+02:00 Edward d'Auvergne :

 On 20 October 2015 at 17:48, Troels Emtekær Linnet
  wrote:
 > Hi.
 >
 > I have added extension:
 > https://www.mediawiki.org/wiki/Extension:Maintenance
 > http://wiki.nmr-relax.com/index.php?title=Special:Version
 > http://wiki.nmr-relax.com/index.php?title=Special:Maintenance
 >
 > I have tried:
 >
 > http://wiki.nmr-relax.com/index.php?title=Special:Maintenance/checkImages
 >
 > 2_make_surface_plot.png: missing
 > About_gui.png: missing
 > About_relax.png: missing
 > Analysis_mf.png: missing
 > Analysis_noe.png: missing
 > Analysis_r1.png: missing
 > Analysis_r2.png: missing
 > Analysis_wizard.png: missing
 > Bug_22024_Dw_kex.png: missing
 > Bug_22024_Dw_kex_pA.png: missing
 > Bug_22024_Dw_pA.png: missing
 > Bug_22024_Kex_pA.png: missing
 > Bug_22024_R2eff.png: missing
 > CPMG_Model_B14_Example_data_disp_1_H.png: missing
 > Consistency_testing_200x94.png: missing
 > Core_design.png: missing
 > Disp_1002_N.png: missing
 > Disp_1003_N.png: missing
 > Disp_1004_N.png: missing
 > Disp_1005_N.png: missing
 > Disp_1006_N.png: missing
 > Disp_1007_N.png: missing
 > Disp_1008_N.png: missing
 > Disp_1009_N.png: missing
 > Disp_1010_N.png: missing
 > Disp_1011_N.png: missing
 > Disp_1012_N.png: missing
 > Disp_1013_N.png: missing
 > Disp_1014_N.png: missing
 > Disp_1015_N.png: missing
 > Disp_1016_N.png: missing
 > Disp_1017_N.png: missing
 > Disp_1018_N.png: missing
 > Disp_1019_N.png: missing
 > Disp_1020_N.png: missing
 > Disp_1021_N.png: missing
 > Disp_1022_N.png: missing
 > Disp_1023_N.png: missing
 > Disp_1024_N.png: missing
 > Disp_1025_N.png: missing
 > Disp_1026_N.png: missing
 > Disp_1027_N.png: missing
 > Disp_1028_N.png: missing
 > Disp_1029_N.png: missing
 > Disp_1030_N.png: missing
 > Disp_1031_N.png: missing
 > Disp_1032_N.png: missing
 > Disp_1033_N.png: missing
 > Disp_1034_N.png: missing
 > Disp_1035_N.png: missing
 > Disp_1036_N.png: missing
 > Disp_1037_N.png: missing
 > Disp_1038_N.png: missing
 > Disp_1039_N.png: missing
 > Disp_1040_N.png: missing
 > Disp_1041_N.png: missing
 > Disp_1042_N.png: missing
 > Disp_1043_N.png: missing
 > Disp_1044_N.png: missing
 > Disp_1045_N.png: missing
 > Disp_1046_N.png: missing
 > Disp_1047_N.png: missing
 > Disp_1048_N.png: 

Re: Javascript problems on the relax wiki.

2015-10-20 Thread Troels Emtekær Linnet
Check.

And now it is back to .htaccess with commented out line

It works

2015-10-20 18:49 GMT+02:00 Edward d'Auvergne :

> On 20 October 2015 at 18:47, Troels Emtekær Linnet
>  wrote:
> > NAILED IT!
>
> You might want to check this.  I just ran the ftp command:
>
> ftp> rename .htaccess old.htaccess
>
> I think that might have had more of an impact ;)
>
> Regards,
>
> Edward
>
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Re: Javascript problems on the relax wiki.

2015-10-20 Thread Troels Emtekær Linnet
Hi.

I have added extension:
https://www.mediawiki.org/wiki/Extension:Maintenance
http://wiki.nmr-relax.com/index.php?title=Special:Version
http://wiki.nmr-relax.com/index.php?title=Special:Maintenance

I have tried:
http://wiki.nmr-relax.com/index.php?title=Special:Maintenance/checkImages

2_make_surface_plot.png: missing
About_gui.png: missing
About_relax.png: missing
Analysis_mf.png: missing
Analysis_noe.png: missing
Analysis_r1.png: missing
Analysis_r2.png: missing
Analysis_wizard.png: missing
Bug_22024_Dw_kex.png: missing
Bug_22024_Dw_kex_pA.png: missing
Bug_22024_Dw_pA.png: missing
Bug_22024_Kex_pA.png: missing
Bug_22024_R2eff.png: missing
CPMG_Model_B14_Example_data_disp_1_H.png: missing
Consistency_testing_200x94.png: missing
Core_design.png: missing
Disp_1002_N.png: missing
Disp_1003_N.png: missing
Disp_1004_N.png: missing
Disp_1005_N.png: missing
Disp_1006_N.png: missing
Disp_1007_N.png: missing
Disp_1008_N.png: missing
Disp_1009_N.png: missing
Disp_1010_N.png: missing
Disp_1011_N.png: missing
Disp_1012_N.png: missing
Disp_1013_N.png: missing
Disp_1014_N.png: missing
Disp_1015_N.png: missing
Disp_1016_N.png: missing
Disp_1017_N.png: missing
Disp_1018_N.png: missing
Disp_1019_N.png: missing
Disp_1020_N.png: missing
Disp_1021_N.png: missing
Disp_1022_N.png: missing
Disp_1023_N.png: missing
Disp_1024_N.png: missing
Disp_1025_N.png: missing
Disp_1026_N.png: missing
Disp_1027_N.png: missing
Disp_1028_N.png: missing
Disp_1029_N.png: missing
Disp_1030_N.png: missing
Disp_1031_N.png: missing
Disp_1032_N.png: missing
Disp_1033_N.png: missing
Disp_1034_N.png: missing
Disp_1035_N.png: missing
Disp_1036_N.png: missing
Disp_1037_N.png: missing
Disp_1038_N.png: missing
Disp_1039_N.png: missing
Disp_1040_N.png: missing
Disp_1041_N.png: missing
Disp_1042_N.png: missing
Disp_1043_N.png: missing
Disp_1044_N.png: missing
Disp_1045_N.png: missing
Disp_1046_N.png: missing
Disp_1047_N.png: missing
Disp_1048_N.png: missing
Disp_1049_N.png: missing
Disp_1050_N.png: missing
Dx_map_1.png: missing
Fig1_Palmer_Massi_2006.png: missing
Git_development.png: missing
License_upload_test.png: missing
License_upload_test_2.png: missing
Map_2.png: missing
Matplotlib_52_N_R1_rho_R2eff_disp.png: missing
Matplotlib_52_N_R1_rho_R2eff_w_eff.png: missing
Matplotlib_52_N_R1_rho_theta_sep.png: missing
Model_free_600x600.png: missing
Molecular_BioSystems_graphical_abstract.png: missing
Noe_600x600.png: missing
Pipe_editor.png: missing
R1_600x600.png: missing
R2_600x600.png: missing
Ramp_Omega_spin-lock_offset.png: missing
Ramp_w1_ramping_spin-lock_field_strength.png: missing
Relax_controller.png: missing
Relax_disp_600x600.png: missing
Relax_prompt.png: missing
Results_viewer.png: missing
Screenshot_start.png: missing
Spin_viewer.png: missing
Test_ftp_diff.png: missing
Test_ftp_mirror.png: missing
Test_image.png: missing
Test_jpeg.jpg: missing
Test_wiki_nmr-relax_com_upload.png: missing
Ulysses_wiki.png: missing
Wiki_test.png: missing
Good images: 0/95
checkImages ran successfully!

2015-10-20 17:34 GMT+02:00 Edward d'Auvergne :

> On 20 October 2015 at 17:29, Troels Emtekær Linnet
>  wrote:
> > I am looking into this:
> >
> > https://www.mediawiki.org/wiki/Manual:Maintenance_scripts
>
> I'm running an ftp dump at the moment, and am looking into possible
> file permission issues.
>
> Regards,
>
> Edward
>
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Re: Javascript problems on the relax wiki.

2015-10-20 Thread Troels Emtekær Linnet
Warning.

I have spent oceans on time on this,

Try this:
http://shorturls.redwerks.org

That helped the last time



## http://www.mediawiki.org/wiki/Manual:Short_URL
## http://www.mediawiki.org/wiki/Manual:Short_URL/Apache
## Made with http://shorturls.redwerks.org/ and Article Path: /$1

2015-10-20 18:41 GMT+02:00 Edward d'Auvergne :

> I'll keep looking, and try to learn the .htaccess rules.  There are
> plenty of people on the internet with the same problem, so a solution
> will be out there.  Most are saying it is the .htaccess file.
>
> Cheers,
>
> Edward
>
> On 20 October 2015 at 18:37, Troels Emtekær Linnet
>  wrote:
> > Yup.
> >
> > I have now enabled all standard extensions, which was avaiable in the
> > extension folder.
> >
> > I give up here...
> >
> > I dont know if the file permissions is correct?
> > Or the md5 hash has changes, or an image table is gone, or something with
> > apache...
> >
> >
> >
> > 2015-10-20 18:31 GMT+02:00 Edward d'Auvergne :
> >>
> >> This is a tough one!
> >>
> >> On 20 October 2015 at 18:16, Edward d'Auvergne 
> >> wrote:
> >> > I currently know absolutely nothing about .htaccess files, but might
> >> > this offer a solution:
> >> > http://www.fvue.nl/wiki/MediaWiki_error:_No_input_file_specified
> >> >
> >> > Regards,
> >> >
> >> > Edward
> >> >
> >> >
> >> > On 20 October 2015 at 18:13, Edward d'Auvergne 
> >> > wrote:
> >> >> I think this is something to do with .htaccess, as it is clearly
> >> >> nothing to do with the MediaWiki part:
> >> >>
> >> >> """
> >> >> [edward@localhost wiki]$ wget
> >> >> http://wiki.nmr-relax.com/images/1/1d/Screenshot_start.png
> >> >> --2015-10-20 18:10:12--
> >> >> http://wiki.nmr-relax.com/images/1/1d/Screenshot_start.png
> >> >> Resolving wiki.nmr-relax.com (wiki.nmr-relax.com)... 217.116.232.203
> >> >> Connecting to wiki.nmr-relax.com
> >> >> (wiki.nmr-relax.com)|217.116.232.203|:80... connected.
> >> >> HTTP request sent, awaiting response... 404 Not Found
> >> >> 2015-10-20 18:10:13 ERROR 404: Not Found.
> >> >>
> >> >> [edward@localhost wiki]$ wget
> >> >> http://wiki.nmr-relax.com/LocalSettings.php
> >> >> --2015-10-20 18:11:24--  http://wiki.nmr-relax.com/LocalSettings.php
> >> >> Resolving wiki.nmr-relax.com (wiki.nmr-relax.com)... 217.116.232.203
> >> >> Connecting to wiki.nmr-relax.com
> >> >> (wiki.nmr-relax.com)|217.116.232.203|:80... connected.
> >> >> HTTP request sent, awaiting response... 200 OK
> >> >> Length: 0 [text/html]
> >> >> Saving to: ‘LocalSettings.php.1’
> >> >>
> >> >> [ <=>
> >> >>
> >> >>  ] 0   --.-K/s   in 0s
> >> >>
> >> >> 2015-10-20 18:11:25 (0.00 B/s) - ‘LocalSettings.php.1’ saved [0/0]
> >> >>
> >> >> [edward@localhost temp]$ wget
> http://wiki.nmr-relax.com/cache/.htaccess
> >> >> --2015-10-20 18:12:23--  http://wiki.nmr-relax.com/cache/.htaccess
> >> >> Resolving wiki.nmr-relax.com (wiki.nmr-relax.com)... 217.116.232.203
> >> >> Connecting to wiki.nmr-relax.com
> >> >> (wiki.nmr-relax.com)|217.116.232.203|:80... connected.
> >> >> HTTP request sent, awaiting response... 403 Forbidden
> >> >> 2015-10-20 18:12:23 ERROR 403: Forbidden.
> >> >>
> >> >> """
> >> >>
> >> >> This is suspicious!
> >> >>
> >> >> Regards,
> >> >>
> >> >> Edward
> >> >>
> >> >>
> >> >>
> >> >>
> >> >> On 20 October 2015 at 18:08, Troels Emtekær Linnet
> >> >>  wrote:
> >> >>> Hm.
> >> >>>
> >> >>> I am looking into this:
> >> >>> https://www.mediawiki.org/wiki/Manual:Image_table
> >> >>> https://www.mediawiki.org/wiki/Manual:$wgHashedUploadDirectory
> >> >>>
> >> >>> This did not work
> >> >>>
> >> >>> I reenabled .htaccess.
> >> >>> Did not work.
> >> >>>
> >> >>> Has the md5 changed?
> >> >>>
> >> >>> 2015-10-20 17:53 GMT+02:00 Edward d'Auvergne  >:
> >> 
> >>  On 20 October 2015 at 17:48, Troels Emtekær Linnet
> >>   wrote:
> >>  > Hi.
> >>  >
> >>  > I have added extension:
> >>  > https://www.mediawiki.org/wiki/Extension:Maintenance
> >>  > http://wiki.nmr-relax.com/index.php?title=Special:Version
> >>  > http://wiki.nmr-relax.com/index.php?title=Special:Maintenance
> >>  >
> >>  > I have tried:
> >>  >
> >>  >
> >>  >
> http://wiki.nmr-relax.com/index.php?title=Special:Maintenance/checkImages
> >>  >
> >>  > 2_make_surface_plot.png: missing
> >>  > About_gui.png: missing
> >>  > About_relax.png: missing
> >>  > Analysis_mf.png: missing
> >>  > Analysis_noe.png: missing
> >>  > Analysis_r1.png: missing
> >>  > Analysis_r2.png: missing
> >>  > Analysis_wizard.png: missing
> >>  > Bug_22024_Dw_kex.png: missing
> >>  > Bug_22024_Dw_kex_pA.png: missing
> >>  > Bug_22024_Dw_pA.png: missing
> >>  > Bug_22024_Kex_pA.png: missing
> >>  > Bug_22024_R2eff.png: missing
> >>  > 

Re: Javascript problems on the relax wiki.

2015-10-20 Thread Edward d'Auvergne
On 20 October 2015 at 18:47, Troels Emtekær Linnet
 wrote:
> NAILED IT!

You might want to check this.  I just ran the ftp command:

ftp> rename .htaccess old.htaccess

I think that might have had more of an impact ;)

Regards,

Edward

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Re: Javascript problems on the relax wiki.

2015-10-20 Thread Troels Emtekær Linnet
http://wiki.nmr-relax.com/Phpinfo.php

Is uploaded.

I now try to unlock database.

So I can try:
http://wiki.nmr-relax.com/Phpinfo.php?action=purge



2015-10-20 17:08 GMT+02:00 Troels Emtekær Linnet :

> Hi Edward.
>
> I have uploaded:
>
> skins/common with favicon and ulysses images
> images/*
>
> Currently, this does not work
>
> http://wiki.nmr-relax.com/File:Analysis_r1.png
> http://wiki.nmr-relax.com/images/9/96/Analysis_r1.png
>
> 2015-10-20 16:55 GMT+02:00 Edward d'Auvergne :
>
>> On 20 October 2015 at 16:44, Troels Emtekær Linnet
>>  wrote:
>> > Hi Edward.
>> >
>> > We are up:
>> >
>> > http://wiki.nmr-relax.com/Main_Page
>> > http://wiki.nmr-relax.com/Special:Version
>> > http://wiki.nmr-relax.com/Javascript_testing
>> >
>> > The wiki is currently locked for editing:
>> >
>> > $wgReadOnly = 'Upgrading to MediaWiki 1.25.3';
>> >
>> > I will now upload images
>>
>> I'm watching the changes, and capturing some of the steps on the
>> wayback machine (for curiosity):
>>
>>
>> https://web.archive.org/web/20151020142128/http://wiki.nmr-relax.com/Main_Page
>>
>> https://web.archive.org/web/20151020143925/http://wiki.nmr-relax.com/Main_Page
>>
>> https://web.archive.org/web/20151020143930/http://wiki.nmr-relax.com/Special:Version
>>
>> I'm also keen to see what happens on this test page:
>>
>> http://wiki.nmr-relax.com/Temp_lua_testing_page
>>
>> If this upgrade gets Lua to work, then maybe this thread can be
>> resurrected:
>>
>> http://thread.gmane.org/gmane.science.nmr.relax.devel/7046
>>
>> And Wikipedia Template:Infobox elements (using the Scribunto
>> extension) can be added for all the relax releases.
>>
>> Cheers!
>>
>> Edward
>>
>
>
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Re: Javascript problems on the relax wiki.

2015-10-20 Thread Edward d'Auvergne
I think this is something to do with .htaccess, as it is clearly
nothing to do with the MediaWiki part:

"""
[edward@localhost wiki]$ wget
http://wiki.nmr-relax.com/images/1/1d/Screenshot_start.png
--2015-10-20 18:10:12--
http://wiki.nmr-relax.com/images/1/1d/Screenshot_start.png
Resolving wiki.nmr-relax.com (wiki.nmr-relax.com)... 217.116.232.203
Connecting to wiki.nmr-relax.com
(wiki.nmr-relax.com)|217.116.232.203|:80... connected.
HTTP request sent, awaiting response... 404 Not Found
2015-10-20 18:10:13 ERROR 404: Not Found.

[edward@localhost wiki]$ wget http://wiki.nmr-relax.com/LocalSettings.php
--2015-10-20 18:11:24--  http://wiki.nmr-relax.com/LocalSettings.php
Resolving wiki.nmr-relax.com (wiki.nmr-relax.com)... 217.116.232.203
Connecting to wiki.nmr-relax.com
(wiki.nmr-relax.com)|217.116.232.203|:80... connected.
HTTP request sent, awaiting response... 200 OK
Length: 0 [text/html]
Saving to: ‘LocalSettings.php.1’

[ <=>

 ] 0   --.-K/s   in 0s

2015-10-20 18:11:25 (0.00 B/s) - ‘LocalSettings.php.1’ saved [0/0]

[edward@localhost temp]$ wget http://wiki.nmr-relax.com/cache/.htaccess
--2015-10-20 18:12:23--  http://wiki.nmr-relax.com/cache/.htaccess
Resolving wiki.nmr-relax.com (wiki.nmr-relax.com)... 217.116.232.203
Connecting to wiki.nmr-relax.com
(wiki.nmr-relax.com)|217.116.232.203|:80... connected.
HTTP request sent, awaiting response... 403 Forbidden
2015-10-20 18:12:23 ERROR 403: Forbidden.

"""

This is suspicious!

Regards,

Edward




On 20 October 2015 at 18:08, Troels Emtekær Linnet
 wrote:
> Hm.
>
> I am looking into this:
> https://www.mediawiki.org/wiki/Manual:Image_table
> https://www.mediawiki.org/wiki/Manual:$wgHashedUploadDirectory
>
> This did not work
>
> I reenabled .htaccess.
> Did not work.
>
> Has the md5 changed?
>
> 2015-10-20 17:53 GMT+02:00 Edward d'Auvergne :
>>
>> On 20 October 2015 at 17:48, Troels Emtekær Linnet
>>  wrote:
>> > Hi.
>> >
>> > I have added extension:
>> > https://www.mediawiki.org/wiki/Extension:Maintenance
>> > http://wiki.nmr-relax.com/index.php?title=Special:Version
>> > http://wiki.nmr-relax.com/index.php?title=Special:Maintenance
>> >
>> > I have tried:
>> >
>> > http://wiki.nmr-relax.com/index.php?title=Special:Maintenance/checkImages
>> >
>> > 2_make_surface_plot.png: missing
>> > About_gui.png: missing
>> > About_relax.png: missing
>> > Analysis_mf.png: missing
>> > Analysis_noe.png: missing
>> > Analysis_r1.png: missing
>> > Analysis_r2.png: missing
>> > Analysis_wizard.png: missing
>> > Bug_22024_Dw_kex.png: missing
>> > Bug_22024_Dw_kex_pA.png: missing
>> > Bug_22024_Dw_pA.png: missing
>> > Bug_22024_Kex_pA.png: missing
>> > Bug_22024_R2eff.png: missing
>> > CPMG_Model_B14_Example_data_disp_1_H.png: missing
>> > Consistency_testing_200x94.png: missing
>> > Core_design.png: missing
>> > Disp_1002_N.png: missing
>> > Disp_1003_N.png: missing
>> > Disp_1004_N.png: missing
>> > Disp_1005_N.png: missing
>> > Disp_1006_N.png: missing
>> > Disp_1007_N.png: missing
>> > Disp_1008_N.png: missing
>> > Disp_1009_N.png: missing
>> > Disp_1010_N.png: missing
>> > Disp_1011_N.png: missing
>> > Disp_1012_N.png: missing
>> > Disp_1013_N.png: missing
>> > Disp_1014_N.png: missing
>> > Disp_1015_N.png: missing
>> > Disp_1016_N.png: missing
>> > Disp_1017_N.png: missing
>> > Disp_1018_N.png: missing
>> > Disp_1019_N.png: missing
>> > Disp_1020_N.png: missing
>> > Disp_1021_N.png: missing
>> > Disp_1022_N.png: missing
>> > Disp_1023_N.png: missing
>> > Disp_1024_N.png: missing
>> > Disp_1025_N.png: missing
>> > Disp_1026_N.png: missing
>> > Disp_1027_N.png: missing
>> > Disp_1028_N.png: missing
>> > Disp_1029_N.png: missing
>> > Disp_1030_N.png: missing
>> > Disp_1031_N.png: missing
>> > Disp_1032_N.png: missing
>> > Disp_1033_N.png: missing
>> > Disp_1034_N.png: missing
>> > Disp_1035_N.png: missing
>> > Disp_1036_N.png: missing
>> > Disp_1037_N.png: missing
>> > Disp_1038_N.png: missing
>> > Disp_1039_N.png: missing
>> > Disp_1040_N.png: missing
>> > Disp_1041_N.png: missing
>> > Disp_1042_N.png: missing
>> > Disp_1043_N.png: missing
>> > Disp_1044_N.png: missing
>> > Disp_1045_N.png: missing
>> > Disp_1046_N.png: missing
>> > Disp_1047_N.png: missing
>> > Disp_1048_N.png: missing
>> > Disp_1049_N.png: missing
>> > Disp_1050_N.png: missing
>> > Dx_map_1.png: missing
>> > Fig1_Palmer_Massi_2006.png: missing
>> > Git_development.png: missing
>> > License_upload_test.png: missing
>> > License_upload_test_2.png: missing
>> > Map_2.png: missing
>> > Matplotlib_52_N_R1_rho_R2eff_disp.png: missing
>> > Matplotlib_52_N_R1_rho_R2eff_w_eff.png: missing
>> > Matplotlib_52_N_R1_rho_theta_sep.png: missing
>> > Model_free_600x600.png: missing
>> > Molecular_BioSystems_graphical_abstract.png: missing
>> > Noe_600x600.png: missing
>> > Pipe_editor.png: missing
>> > R1_600x600.png: missing
>> > R2_600x600.png: missing
>> > Ramp_Omega_spin-lock_offset.png: missing

Re: Javascript problems on the relax wiki.

2015-10-20 Thread Troels Emtekær Linnet
I think you can leave the "old" version of .htaccess

# Protect against bug 28235

RewriteEngine On
RewriteCond %{QUERY_STRING} \.[^\\/:*?\x22<>|%]+(#|\?|$) [nocase]
RewriteRule . - [forbidden]
# Fix for bug T64289
# Options +FollowSymLinks


The bug is here:
https://phabricator.wikimedia.org/T64289

Some developer must have added the Symlinks

2015-10-20 18:47 GMT+02:00 Edward d'Auvergne :

> He he, I just killed the images/.htaccess file, and all is good :)
>
> Regards,
>
> Edward
>
> On 20 October 2015 at 18:43, Troels Emtekær Linnet
>  wrote:
> > Warning.
> >
> > I have spent oceans on time on this,
> >
> > Try this:
> > http://shorturls.redwerks.org
> >
> > That helped the last time
> >
> >
> >
> > ## http://www.mediawiki.org/wiki/Manual:Short_URL
> > ## http://www.mediawiki.org/wiki/Manual:Short_URL/Apache
> > ## Made with http://shorturls.redwerks.org/ and Article Path: /$1
> >
> > 2015-10-20 18:41 GMT+02:00 Edward d'Auvergne :
> >>
> >> I'll keep looking, and try to learn the .htaccess rules.  There are
> >> plenty of people on the internet with the same problem, so a solution
> >> will be out there.  Most are saying it is the .htaccess file.
> >>
> >> Cheers,
> >>
> >> Edward
> >>
> >> On 20 October 2015 at 18:37, Troels Emtekær Linnet
> >>  wrote:
> >> > Yup.
> >> >
> >> > I have now enabled all standard extensions, which was avaiable in the
> >> > extension folder.
> >> >
> >> > I give up here...
> >> >
> >> > I dont know if the file permissions is correct?
> >> > Or the md5 hash has changes, or an image table is gone, or something
> >> > with
> >> > apache...
> >> >
> >> >
> >> >
> >> > 2015-10-20 18:31 GMT+02:00 Edward d'Auvergne :
> >> >>
> >> >> This is a tough one!
> >> >>
> >> >> On 20 October 2015 at 18:16, Edward d'Auvergne  >
> >> >> wrote:
> >> >> > I currently know absolutely nothing about .htaccess files, but
> might
> >> >> > this offer a solution:
> >> >> > http://www.fvue.nl/wiki/MediaWiki_error:_No_input_file_specified
> >> >> >
> >> >> > Regards,
> >> >> >
> >> >> > Edward
> >> >> >
> >> >> >
> >> >> > On 20 October 2015 at 18:13, Edward d'Auvergne <
> edw...@nmr-relax.com>
> >> >> > wrote:
> >> >> >> I think this is something to do with .htaccess, as it is clearly
> >> >> >> nothing to do with the MediaWiki part:
> >> >> >>
> >> >> >> """
> >> >> >> [edward@localhost wiki]$ wget
> >> >> >> http://wiki.nmr-relax.com/images/1/1d/Screenshot_start.png
> >> >> >> --2015-10-20 18:10:12--
> >> >> >> http://wiki.nmr-relax.com/images/1/1d/Screenshot_start.png
> >> >> >> Resolving wiki.nmr-relax.com (wiki.nmr-relax.com)...
> 217.116.232.203
> >> >> >> Connecting to wiki.nmr-relax.com
> >> >> >> (wiki.nmr-relax.com)|217.116.232.203|:80... connected.
> >> >> >> HTTP request sent, awaiting response... 404 Not Found
> >> >> >> 2015-10-20 18:10:13 ERROR 404: Not Found.
> >> >> >>
> >> >> >> [edward@localhost wiki]$ wget
> >> >> >> http://wiki.nmr-relax.com/LocalSettings.php
> >> >> >> --2015-10-20 18:11:24--
> http://wiki.nmr-relax.com/LocalSettings.php
> >> >> >> Resolving wiki.nmr-relax.com (wiki.nmr-relax.com)...
> 217.116.232.203
> >> >> >> Connecting to wiki.nmr-relax.com
> >> >> >> (wiki.nmr-relax.com)|217.116.232.203|:80... connected.
> >> >> >> HTTP request sent, awaiting response... 200 OK
> >> >> >> Length: 0 [text/html]
> >> >> >> Saving to: ‘LocalSettings.php.1’
> >> >> >>
> >> >> >> [ <=>
> >> >> >>
> >> >> >>  ] 0   --.-K/s   in 0s
> >> >> >>
> >> >> >> 2015-10-20 18:11:25 (0.00 B/s) - ‘LocalSettings.php.1’ saved [0/0]
> >> >> >>
> >> >> >> [edward@localhost temp]$ wget
> >> >> >> http://wiki.nmr-relax.com/cache/.htaccess
> >> >> >> --2015-10-20 18:12:23--
> http://wiki.nmr-relax.com/cache/.htaccess
> >> >> >> Resolving wiki.nmr-relax.com (wiki.nmr-relax.com)...
> 217.116.232.203
> >> >> >> Connecting to wiki.nmr-relax.com
> >> >> >> (wiki.nmr-relax.com)|217.116.232.203|:80... connected.
> >> >> >> HTTP request sent, awaiting response... 403 Forbidden
> >> >> >> 2015-10-20 18:12:23 ERROR 403: Forbidden.
> >> >> >>
> >> >> >> """
> >> >> >>
> >> >> >> This is suspicious!
> >> >> >>
> >> >> >> Regards,
> >> >> >>
> >> >> >> Edward
> >> >> >>
> >> >> >>
> >> >> >>
> >> >> >>
> >> >> >> On 20 October 2015 at 18:08, Troels Emtekær Linnet
> >> >> >>  wrote:
> >> >> >>> Hm.
> >> >> >>>
> >> >> >>> I am looking into this:
> >> >> >>> https://www.mediawiki.org/wiki/Manual:Image_table
> >> >> >>> https://www.mediawiki.org/wiki/Manual:$wgHashedUploadDirectory
> >> >> >>>
> >> >> >>> This did not work
> >> >> >>>
> >> >> >>> I reenabled .htaccess.
> >> >> >>> Did not work.
> >> >> >>>
> >> >> >>> Has the md5 changed?
> >> >> >>>
> >> >> >>> 2015-10-20 17:53 GMT+02:00 Edward d'Auvergne
> >> >> >>> :
> >> >> 
> >> >>  On 20 October 2015 at 17:48, Troels Emtekær 

Re: Javascript problems on the relax wiki.

2015-10-20 Thread Troels Emtekær Linnet
Anyway.

That solution was so random, that I cannot believe I used 2 hours on this...

Oh you programming.

I leave it up to you, to add the missing extensions.

The lines in LocalSettings are commented out with:
#20151020

Cheers!

2015-10-20 18:51 GMT+02:00 Troels Emtekær Linnet :

> Check.
>
> And now it is back to .htaccess with commented out line
>
> It works
>
> 2015-10-20 18:49 GMT+02:00 Edward d'Auvergne :
>
>> On 20 October 2015 at 18:47, Troels Emtekær Linnet
>>  wrote:
>> > NAILED IT!
>>
>> You might want to check this.  I just ran the ftp command:
>>
>> ftp> rename .htaccess old.htaccess
>>
>> I think that might have had more of an impact ;)
>>
>> Regards,
>>
>> Edward
>>
>
>
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Re: Javascript problems on the relax wiki.

2015-10-20 Thread Edward d'Auvergne
On 20 October 2015 at 16:44, Troels Emtekær Linnet
 wrote:
> Hi Edward.
>
> We are up:
>
> http://wiki.nmr-relax.com/Main_Page
> http://wiki.nmr-relax.com/Special:Version
> http://wiki.nmr-relax.com/Javascript_testing
>
> The wiki is currently locked for editing:
>
> $wgReadOnly = 'Upgrading to MediaWiki 1.25.3';
>
> I will now upload images

I'm watching the changes, and capturing some of the steps on the
wayback machine (for curiosity):


https://web.archive.org/web/20151020142128/http://wiki.nmr-relax.com/Main_Page

https://web.archive.org/web/20151020143925/http://wiki.nmr-relax.com/Main_Page

https://web.archive.org/web/20151020143930/http://wiki.nmr-relax.com/Special:Version

I'm also keen to see what happens on this test page:

http://wiki.nmr-relax.com/Temp_lua_testing_page

If this upgrade gets Lua to work, then maybe this thread can be resurrected:

http://thread.gmane.org/gmane.science.nmr.relax.devel/7046

And Wikipedia Template:Infobox elements (using the Scribunto
extension) can be added for all the relax releases.

Cheers!

Edward

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Re: Javascript problems on the relax wiki.

2015-10-20 Thread Troels Emtekær Linnet
Hi Edward.

I have uploaded:

skins/common with favicon and ulysses images
images/*

Currently, this does not work

http://wiki.nmr-relax.com/File:Analysis_r1.png
http://wiki.nmr-relax.com/images/9/96/Analysis_r1.png

2015-10-20 16:55 GMT+02:00 Edward d'Auvergne :

> On 20 October 2015 at 16:44, Troels Emtekær Linnet
>  wrote:
> > Hi Edward.
> >
> > We are up:
> >
> > http://wiki.nmr-relax.com/Main_Page
> > http://wiki.nmr-relax.com/Special:Version
> > http://wiki.nmr-relax.com/Javascript_testing
> >
> > The wiki is currently locked for editing:
> >
> > $wgReadOnly = 'Upgrading to MediaWiki 1.25.3';
> >
> > I will now upload images
>
> I'm watching the changes, and capturing some of the steps on the
> wayback machine (for curiosity):
>
>
> https://web.archive.org/web/20151020142128/http://wiki.nmr-relax.com/Main_Page
>
> https://web.archive.org/web/20151020143925/http://wiki.nmr-relax.com/Main_Page
>
> https://web.archive.org/web/20151020143930/http://wiki.nmr-relax.com/Special:Version
>
> I'm also keen to see what happens on this test page:
>
> http://wiki.nmr-relax.com/Temp_lua_testing_page
>
> If this upgrade gets Lua to work, then maybe this thread can be
> resurrected:
>
> http://thread.gmane.org/gmane.science.nmr.relax.devel/7046
>
> And Wikipedia Template:Infobox elements (using the Scribunto
> extension) can be added for all the relax releases.
>
> Cheers!
>
> Edward
>
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Re: Javascript problems on the relax wiki.

2015-10-20 Thread Edward d'Auvergne
On 20 October 2015 at 13:00, Troels Emtekær Linnet
 wrote:
> Hi Edward.
>
> In:
> https://www.mediawiki.org/wiki/Manual:Collapsible_elements#NavFrame
>
> It says with red text, that MediaWiki version: ≤ 1.18
>
> ??

Hi,

Thanks for the quick response!  The support should be there, but some
bug is breaking the JavaScript on
http://wiki.nmr-relax.com/MediaWiki:Common.js .  The "mw-collapsible"
is fully functional, but the class="NavFrame" elements are more
advanced relying on this custom JavaScript to turn the  box into
a collapsible element, based on the MediaWiki "mw-collapsible"
concept.


> 2015-10-20 12:45 GMT+02:00 Troels Emtekær Linnet :
>>
>> Hi Edward.
>>
>> I have tried:
>> http://wiki.nmr-relax.com/Javascript_testing
>>
>> For me this looks fine?
>>
>> For the NavFrame test, I see both an expanded and collapsed box.
>>
>> Is the error, that you don't see " the [hide] and [show] links to the
>> right of the titles" ?
>>
>> This must be what you are missing:
>> I also don't see the possibility to expand or hide.

This is the problem.  The standard MediaWiki NavFrame JavaScript that
I added to http://wiki.nmr-relax.com/MediaWiki:Common.js is somehow
broken.  This js code should turn the  element
into a collapsible element, which appears to be working using an old
version of the NavFrame JavaScript, but it is having a problem adding
the "[ show ]" and "[ hide ]" text into the  box to allow the
 box to open and close.


>> From:
>> http://wiki.nmr-relax.com/Special:Version
>>
>> I see:
>> MediaWiki 1.21.1
>> PHP 5.3.29 (cgi-fcgi)
>> MySQL 5.6.25-1~dotdeb+7.1
>>
>> Latest version of Mediawiki is:
>> 1.25.3, and 1.21.1 is from 2013-05-25.
>> https://www.mediawiki.org/wiki/News
>>
>> On the server is: PHP 5.3 enabled.
>> I can change to: 5.4, 5.5, 5.6, 7.0 (RC).
>>
>> And there is options to change for PHP.
>> allow_url_fopen: On
>> allow_url_include: On
>> always_populate_raw_post_data: 0
>> apc.rfc1867: On
>> asp_tags: On
>> date.timezone
>> default_mimetype: text/html
>> display_errors: On
>> engine: On
>> expose_php: On
>> file_uploads: On
>> html_errors: On
>> magic_quotes_gpc: Off
>> max_execution_time: 30
>> max_file_uploads: 20
>> max_input_time: 60
>> max_input_vars: 1000
>> mbstring.func_overload: 0
>> mbstring.internal_encoding:
>> memory_limit: 128 MB
>> mysql.allow_persistent: On
>> mysql.default_host:
>> mysql.default_port: 3306
>> mysql.default_user:
>> mysql.trace_mode: Off
>> output_buffering: Off
>> post_max_size: 32 Mb
>> realpath_cache_size: 16
>> realpath_cache_ttl: 120
>> register_globals: Off
>> safe_mode: Off
>> session.auto_start: Off
>> session.bug_compat_42: Off
>> session.bug_compat_warn: Off
>> session.cookie_domain:
>> session.cookie_lifetime: 0
>> session.cookie_path: /
>> session.gc_maxlifetime: 3600
>>
>> and some 20 more.
>>
>>
>> Does any of this help you?

Unfortunately not.   The info at http://wiki.nmr-relax.com/phpinfo.php
also doesn't help.  That's why I have a feeling that this is maybe a
bug within MediaWiki itself, specifically to do with JavaScript.
Though I cannot be sure.  In any case, the result should be that "[
show ]" and "[ hide ]" links are present, so that these two templates
match 100%, as the code is identical:

http://wiki.nmr-relax.com/Template:Collapsible_script
http://wiki.flightgear.org/Template:Collapsible_script

I'll continue with the testing.  Though temporarily removing all
installed extensions from LocalSettings.php does not fix the problem,
so it won't be an extension problem.  It is rather perplexing!

Cheers,

Edward

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Re: Javascript problems on the relax wiki.

2015-10-20 Thread Troels Emtekær Linnet
Hi Edward.

I will try to change the PHP version, to see what happens.

Best
Troels

2015-10-20 15:07 GMT+02:00 Edward d'Auvergne :

> On 20 October 2015 at 13:00, Troels Emtekær Linnet
>  wrote:
> > Hi Edward.
> >
> > In:
> > https://www.mediawiki.org/wiki/Manual:Collapsible_elements#NavFrame
> >
> > It says with red text, that MediaWiki version: ≤ 1.18
> >
> > ??
>
> Hi,
>
> Thanks for the quick response!  The support should be there, but some
> bug is breaking the JavaScript on
> http://wiki.nmr-relax.com/MediaWiki:Common.js .  The "mw-collapsible"
> is fully functional, but the class="NavFrame" elements are more
> advanced relying on this custom JavaScript to turn the  box into
> a collapsible element, based on the MediaWiki "mw-collapsible"
> concept.
>
>
> > 2015-10-20 12:45 GMT+02:00 Troels Emtekær Linnet  >:
> >>
> >> Hi Edward.
> >>
> >> I have tried:
> >> http://wiki.nmr-relax.com/Javascript_testing
> >>
> >> For me this looks fine?
> >>
> >> For the NavFrame test, I see both an expanded and collapsed box.
> >>
> >> Is the error, that you don't see " the [hide] and [show] links to the
> >> right of the titles" ?
> >>
> >> This must be what you are missing:
> >> I also don't see the possibility to expand or hide.
>
> This is the problem.  The standard MediaWiki NavFrame JavaScript that
> I added to http://wiki.nmr-relax.com/MediaWiki:Common.js is somehow
> broken.  This js code should turn the  element
> into a collapsible element, which appears to be working using an old
> version of the NavFrame JavaScript, but it is having a problem adding
> the "[ show ]" and "[ hide ]" text into the  box to allow the
>  box to open and close.
>
>
> >> From:
> >> http://wiki.nmr-relax.com/Special:Version
> >>
> >> I see:
> >> MediaWiki 1.21.1
> >> PHP 5.3.29 (cgi-fcgi)
> >> MySQL 5.6.25-1~dotdeb+7.1
> >>
> >> Latest version of Mediawiki is:
> >> 1.25.3, and 1.21.1 is from 2013-05-25.
> >> https://www.mediawiki.org/wiki/News
> >>
> >> On the server is: PHP 5.3 enabled.
> >> I can change to: 5.4, 5.5, 5.6, 7.0 (RC).
> >>
> >> And there is options to change for PHP.
> >> allow_url_fopen: On
> >> allow_url_include: On
> >> always_populate_raw_post_data: 0
> >> apc.rfc1867: On
> >> asp_tags: On
> >> date.timezone
> >> default_mimetype: text/html
> >> display_errors: On
> >> engine: On
> >> expose_php: On
> >> file_uploads: On
> >> html_errors: On
> >> magic_quotes_gpc: Off
> >> max_execution_time: 30
> >> max_file_uploads: 20
> >> max_input_time: 60
> >> max_input_vars: 1000
> >> mbstring.func_overload: 0
> >> mbstring.internal_encoding:
> >> memory_limit: 128 MB
> >> mysql.allow_persistent: On
> >> mysql.default_host:
> >> mysql.default_port: 3306
> >> mysql.default_user:
> >> mysql.trace_mode: Off
> >> output_buffering: Off
> >> post_max_size: 32 Mb
> >> realpath_cache_size: 16
> >> realpath_cache_ttl: 120
> >> register_globals: Off
> >> safe_mode: Off
> >> session.auto_start: Off
> >> session.bug_compat_42: Off
> >> session.bug_compat_warn: Off
> >> session.cookie_domain:
> >> session.cookie_lifetime: 0
> >> session.cookie_path: /
> >> session.gc_maxlifetime: 3600
> >>
> >> and some 20 more.
> >>
> >>
> >> Does any of this help you?
>
> Unfortunately not.   The info at http://wiki.nmr-relax.com/phpinfo.php
> also doesn't help.  That's why I have a feeling that this is maybe a
> bug within MediaWiki itself, specifically to do with JavaScript.
> Though I cannot be sure.  In any case, the result should be that "[
> show ]" and "[ hide ]" links are present, so that these two templates
> match 100%, as the code is identical:
>
> http://wiki.nmr-relax.com/Template:Collapsible_script
> http://wiki.flightgear.org/Template:Collapsible_script
>
> I'll continue with the testing.  Though temporarily removing all
> installed extensions from LocalSettings.php does not fix the problem,
> so it won't be an extension problem.  It is rather perplexing!
>
> Cheers,
>
> Edward
>
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Re: Javascript problems on the relax wiki.

2015-10-20 Thread Troels Emtekær Linnet
This shows it should be possible to change:

https://www.mediawiki.org/wiki/Compatibility

2015-10-20 15:26 GMT+02:00 Troels Emtekær Linnet :

> Hi Edward.
>
> I will try to change the PHP version, to see what happens.
>
> Best
> Troels
>
> 2015-10-20 15:07 GMT+02:00 Edward d'Auvergne :
>
>> On 20 October 2015 at 13:00, Troels Emtekær Linnet
>>  wrote:
>> > Hi Edward.
>> >
>> > In:
>> > https://www.mediawiki.org/wiki/Manual:Collapsible_elements#NavFrame
>> >
>> > It says with red text, that MediaWiki version: ≤ 1.18
>> >
>> > ??
>>
>> Hi,
>>
>> Thanks for the quick response!  The support should be there, but some
>> bug is breaking the JavaScript on
>> http://wiki.nmr-relax.com/MediaWiki:Common.js .  The "mw-collapsible"
>> is fully functional, but the class="NavFrame" elements are more
>> advanced relying on this custom JavaScript to turn the  box into
>> a collapsible element, based on the MediaWiki "mw-collapsible"
>> concept.
>>
>>
>> > 2015-10-20 12:45 GMT+02:00 Troels Emtekær Linnet > >:
>> >>
>> >> Hi Edward.
>> >>
>> >> I have tried:
>> >> http://wiki.nmr-relax.com/Javascript_testing
>> >>
>> >> For me this looks fine?
>> >>
>> >> For the NavFrame test, I see both an expanded and collapsed box.
>> >>
>> >> Is the error, that you don't see " the [hide] and [show] links to the
>> >> right of the titles" ?
>> >>
>> >> This must be what you are missing:
>> >> I also don't see the possibility to expand or hide.
>>
>> This is the problem.  The standard MediaWiki NavFrame JavaScript that
>> I added to http://wiki.nmr-relax.com/MediaWiki:Common.js is somehow
>> broken.  This js code should turn the  element
>> into a collapsible element, which appears to be working using an old
>> version of the NavFrame JavaScript, but it is having a problem adding
>> the "[ show ]" and "[ hide ]" text into the  box to allow the
>>  box to open and close.
>>
>>
>> >> From:
>> >> http://wiki.nmr-relax.com/Special:Version
>> >>
>> >> I see:
>> >> MediaWiki 1.21.1
>> >> PHP 5.3.29 (cgi-fcgi)
>> >> MySQL 5.6.25-1~dotdeb+7.1
>> >>
>> >> Latest version of Mediawiki is:
>> >> 1.25.3, and 1.21.1 is from 2013-05-25.
>> >> https://www.mediawiki.org/wiki/News
>> >>
>> >> On the server is: PHP 5.3 enabled.
>> >> I can change to: 5.4, 5.5, 5.6, 7.0 (RC).
>> >>
>> >> And there is options to change for PHP.
>> >> allow_url_fopen: On
>> >> allow_url_include: On
>> >> always_populate_raw_post_data: 0
>> >> apc.rfc1867: On
>> >> asp_tags: On
>> >> date.timezone
>> >> default_mimetype: text/html
>> >> display_errors: On
>> >> engine: On
>> >> expose_php: On
>> >> file_uploads: On
>> >> html_errors: On
>> >> magic_quotes_gpc: Off
>> >> max_execution_time: 30
>> >> max_file_uploads: 20
>> >> max_input_time: 60
>> >> max_input_vars: 1000
>> >> mbstring.func_overload: 0
>> >> mbstring.internal_encoding:
>> >> memory_limit: 128 MB
>> >> mysql.allow_persistent: On
>> >> mysql.default_host:
>> >> mysql.default_port: 3306
>> >> mysql.default_user:
>> >> mysql.trace_mode: Off
>> >> output_buffering: Off
>> >> post_max_size: 32 Mb
>> >> realpath_cache_size: 16
>> >> realpath_cache_ttl: 120
>> >> register_globals: Off
>> >> safe_mode: Off
>> >> session.auto_start: Off
>> >> session.bug_compat_42: Off
>> >> session.bug_compat_warn: Off
>> >> session.cookie_domain:
>> >> session.cookie_lifetime: 0
>> >> session.cookie_path: /
>> >> session.gc_maxlifetime: 3600
>> >>
>> >> and some 20 more.
>> >>
>> >>
>> >> Does any of this help you?
>>
>> Unfortunately not.   The info at http://wiki.nmr-relax.com/phpinfo.php
>> also doesn't help.  That's why I have a feeling that this is maybe a
>> bug within MediaWiki itself, specifically to do with JavaScript.
>> Though I cannot be sure.  In any case, the result should be that "[
>> show ]" and "[ hide ]" links are present, so that these two templates
>> match 100%, as the code is identical:
>>
>> http://wiki.nmr-relax.com/Template:Collapsible_script
>> http://wiki.flightgear.org/Template:Collapsible_script
>>
>> I'll continue with the testing.  Though temporarily removing all
>> installed extensions from LocalSettings.php does not fix the problem,
>> so it won't be an extension problem.  It is rather perplexing!
>>
>> Cheers,
>>
>> Edward
>>
>
>
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Re: Javascript problems on the relax wiki.

2015-10-20 Thread Edward d'Auvergne
On 20 October 2015 at 15:36, Troels Emtekær Linnet
 wrote:
> Hi.
>
> When I upgrade from 5.3, the page is flooded with problems relating to:
>
> includes/MagicWord.php
>
> http://www.gossamer-threads.com/lists/wiki/mediawiki/504636
>
> The fix is to update the wiki.
>
> Do you have a current backup?

Yes, my cron job just ran for the day, so I have a db dump, XML dump,
and ftpdump from a few hours ago.

Regards,

Edward

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Re: Javascript problems on the relax wiki.

2015-10-20 Thread Edward d'Auvergne
On 20 October 2015 at 15:36, Troels Emtekær Linnet
 wrote:
> Hi.
>
> When I upgrade from 5.3, the page is flooded with problems relating to:
>
> includes/MagicWord.php
>
> http://www.gossamer-threads.com/lists/wiki/mediawiki/504636
>
> The fix is to update the wiki.

Is there shell access to run the MediaWiki update.php script?  Or is
this web-interface only?  I can help with updating the extensions, and
we can do this gradually.

Cheers,

Edward

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