Public bug reported:

Binary package hint: update-manager

After doing an update (or checking for an update) update manager takes
up to a minute to remove itself from the notification area after it has
been closed. the notification icon states a package manger is being run
even though one is not.  you can still run apt-get or click the icon and
launch update manager

uname:
Linux 2.6.24-12-generic #1 SMP Wed Mar 12 23:01:54 UTC 2008 i686 GNU/Linux
lsb_release:
Description:    Ubuntu hardy (development branch)
Release:        8.04

update-manager:
  Installed: 1:0.87.14
  Candidate: 1:0.87.14
  Version table:
 *** 1:0.87.14 0
        500 http://us.archive.ubuntu.com hardy/main Packages
        100 /var/lib/dpkg/status

notification-daemon:
  Installed: 0.3.7-1ubuntu10
  Candidate: 0.3.7-1ubuntu10
  Version table:
 *** 0.3.7-1ubuntu10 0
        500 http://us.archive.ubuntu.com hardy/main Packages
        100 /var/lib/dpkg/status
 
update-notifier:
  Installed: 0.70.5
  Candidate: 0.70.5
  Version table:
 *** 0.70.5 0
        500 http://us.archive.ubuntu.com hardy/main Packages
        100 /var/lib/dpkg/status

** Affects: update-manager (Ubuntu)
     Importance: Undecided
         Status: New

-- 
update manager notification slow closing
https://bugs.launchpad.net/bugs/206360
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