[vmtk-users] vtkvmtk with C++

2013-04-01 Thread Berkowitz, Benjamin M
Hi, I'm interested in implementing some of the great functionality from the vtkvmtk C++ libraries into my programs. Is there a simple way to include all vtkvmtk libraries in my CMakeLists.txt file? Thanks Ben -- Own

Re: [vmtk-users] Problem: Interactor? Cannot move image planes in the renderer

2013-04-01 Thread Berkowitz, Benjamin M
Mat, I tried to do that with the Magic Mouse and BetterTouchTool. I couldn't get it to work. If you shell out a few bucks for a simple scroll-wheel mouse you can use that mouse specifically to move the image planes and the Magic Mouse for everything else. It's clunky but it works. Ben On

Re: [vmtk-users] calling VMTK from MATLAB

2013-04-01 Thread Berkowitz, Benjamin M
Anouk, You would need to have vmtk command line functionality implemented in order to use the vmtkscripts with the system function (http://www.vmtk.org/Main/Installation/). Ben On Mar 29, 2013, at 7:58 AM, Anouk Post anoukp...@gmail.com wrote: Hi Luca, Thanks! I do understand how I

Re: [vmtk-users] calling VMTK from MATLAB

2013-04-01 Thread Luca Antiga
Hi Anouk, Ben, right, although there might be a chance that just doing system('vmtk vmtksurfaceviewer -ifile foo.vtp'); might work, i.e. just specify the pipe right after the call to the vmtk script - the one that makes pypepad show up (above I just wrote vmtk, but whatever you used that

Re: [vmtk-users] vtkvmtk with C++

2013-04-01 Thread Luca Antiga
Hi Ben, try including the VMTKUse.cmake file in the vmtk build directory into your CMake project include(/path/to/VMTKUse.cmake) I just saw that the VMTKUse.cmake.in file needs an update, but it should work for most use cases. Best, Luca On Apr 1, 2013, at 7:21 PM, Berkowitz, Benjamin M

Re: [vmtk-users] How to calculate the ICA angle or planarity angle in VMTK or Paraview

2013-04-01 Thread Luca Antiga
Hi YiQiang, 1)what difference are between InPlaneBifurcationVectorAngles and ICA angle? The InPlaneBifurcationVectorAngles are the angles between the up-normal vector and a branch vector projected onto the bifurcation plane. The ICA angle is the angle between the ICA and ECA vectors

Re: [vmtk-users] Combineing level sets

2013-04-01 Thread Luca Antiga
Hello Adrian, in case of segmented sub-volumes of a larger volume, assuming the original larger volume is large.vti and the level set segmentations obtained from two smaller volumes (both extracted from large.vti) are ls1.vti and ls2.vti, you first need to resample the ls* volumes back onto the