Some possible causes:
a) Installation is corrupt [
https://software.intel.com/en-us/forums/intel-fortran-compiler-for-linux-and-mac-os-x/topic/748744
]
- You might want to check your Intel installation and see if the
libifcore.so.5 file exists [
What did you change the data toler value to? The 1.d-07 [
https://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/msg15787.html
] to 1.d-05 [
https://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/msg16402.html
]?
You used bz_lin.patch [
The reason init_lapw uses "-p" for dstart is likely so that the program
can autodetect whether or not dstart should run in serial or parallel mode.
As shown below, you should see it runs dstart in serial mode just fine
without or with "-p":
username@computername:~/wien/test$ ls -l
total 60
I quickly created a WIEN2k 17.1 test case (as shown below) and believe I
have reproduced the issue.
The 7_SrPtAs.bands.agr that was generated shows 6 lines between the M
and K labels with data toler /1.d-07/. The 5_SrPtAs.bands.agr that was
generated using data toler /1.d-05/ does not have
Good to hear that your problem seems to be solved.
If you use serial mode "x dstart -p" again and encounter a problem,
below is possibly an error message improvement for dstartpara_lapw that
one could try. It's the dstartpara_lapw.patch at:
Regarding your question 1) below, yes, it is necessary to add the -up
and -dn to the "x w2w -so" command as the Wien2Wannier 2.0 User’s Guide
says on page 5:
"Note: it does not make sense to run x w2w -so without either -up or -dn;"
Regarding your question 2) below, in the thread of posts for
In the dftd3.f of dftd3.tgz for V3.2 Rev 0 at
https://www.chemie.uni-bonn.de/pctc/mulliken-center/software/dft-d3/get-the-current-version-of-dft-d3
the lines 1531 - 1538 are:
! read parameter file from home directory
call system('hostname > .tmpx')
open(unit=43,file='.tmpx')
You may need to copy case.inwf to case.inwfup:
https://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/msg15145.html
https://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/msg15118.html
or maybe a newer version of Wien2Wannier is needed:
The following you say you have containing 3 dots
.dftd3.par.localhost
is not that same as 2 dots:
.dftd3par.localhost
The hostname localhost might be okay or it might not be. Your
case.dayfile indicates that your hostname may need to be
localhost.localdomain. Thus, you might need to
Maybe they are saying that by using the MULTI values given in case.struct:
:MMTOT = :MMI002*MULTI_Fe + :MMI001*MULTI_Y + :MMINT [
https://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/msg16320.html ]
:MMTOT = 2.8*4 + (-0.31749*2) + (-0.98948) = 6.82026 (same as MMTOT
but to 4
That is due to a known bug in WIEN2k 17.1 [
https://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/msg17218.html
]. It can be quite the effort to apply the fixes to WIEN2k 17.1 that
are mentioned in the mailing list (such as those mentioned at
See:
https://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/msg17212.html
On 8/2/2018 9:04 AM, Ramsewak Kashyap wrote:
I have update wien2k 18.2 and running the TiC example. Calculation
giving this error
next is setrmt
next is nn
STOP NN ENDS
specify nn-bondlength factor:
I believe WIEN2k still cannot do non-collinear magnetism.
There is WIENncm [ http://susi.theochem.tuwien.ac.at/reg_user/ncm/ ].
However, you need to be somewhat of an expert (with theory and
programming) to use it as I believe it still hasn't been maintained by
anyone to keep it up-to-date
Yes, or at least as far as I currently can tell, I believe support for
CYZ lattices has not been implemented for "x supercell".
I haven't tried it, but my guess is that happens for example with any
space group 38_Amm2 structures (generated by sgroup):
In WIEN2k 18.2, line 842 (seen in your error message below) in
SRC_w2w/util_w2w.F seems to be an "end if" statement. I would expect to
see a "read" statement, which suggests that you might be using an older
buggy WIEN2k version.
What WIEN2k version are you using that gives that error?
Also,
My advice:
I very much recommend using WIEN2k 18.2 for SO calculations. I believe
there were some serious spin orbit calculation bugs in WIEN2k 16.1. If
you want to know more about the 16.1 bugs in detail, check the WIEN2k
updates list [1] and see what fixes were made in particular to
That warning message which occurs in WIEN2k 18.2 (and 18.1) with the
ifort compiler means the -lm flag should not come before the object (.o)
files:
username@computername:~$ cd $WIENROOT/SRC_cif2struct
username@computername:~/WIEN2k/SRC_cif2struct$ tail -2 compile.msg
ifort -o ./cif2struct
I don't know for sure, but it might be that the /localscratch permission
denied errors make the parallel calculations broken.
To fix that, the cluster administer would probably have to give you file
permission to use /localscratch or /localscratch would have to be
changed to a directory that
hemie/forschungsgruppen/prof_dr_gkh_madsen_theoretical_materials_chemistry/boltztrap2/
On 8/16/2018 5:30 AM, BUSHRA SABIR wrote:
Prof Peter Blaha and Gavin abo,
i am trying to install wien2k latest version 18.2,
while installation i am facing problem.
In command
./siteconfig_lapw
i face error
Does your structure for this SO+U case allow a shifted k-mesh [1]? If
so, make sure during "x kgen" that you selected the non-shifted k-mesh
as the XCrySDen website [2] says:
"File-->Open WIEN2k ...-->Fermi Surface Pops-up a task window for Fermi
surface creation. After several steps the
I don't know if the 2017 version of crystal (CRYSTAL17) [
http://www.crystal.unito.it/index.php ] works with XCrySDen. You might
need one of the older CRYSTAL-95/98/03/06 versions [
http://www.xcrysden.org/doc/crystal.html ].
If you have one of the older versions installed that works on your
-lxc and -lxcf03 tells the compiler's linker to use the LIBXC library
files named libxc.a and libxcf03.a, respectively.
As the error message says, it cannot find the libxc.a and libxcf03.a files.
The path to the files set in LIBXC-LIBS of siteconfig might incorrect,
or your installation of
I tried the files you sent me.
When I click on the "ErrorInfo" button, it gives me:
At line 125 of file wn_readbakgegn.f (unit = 8, file = 'case.outputkgen')
Fortran runtime error: Bad integer for item 1 in list input
Based on the XCrySDen mailing list post for that error at:
In the SRC_lapw1/compile.msg that you sent, look at the error message:
ld: cannot find -lmkl_lapack
If you check the Intel mkl documentation [
https://software.intel.com/en-us/mkl-linux-developer-guide-listing-libraries-on-a-link-line
], it indicates for 64 bit that the lapack library flag
The SRC_lapw1/compile.msg is fine now.
If you don't have lapw0_mpi and lapw2_mpi, you need to check
SRC_lapw0/compile.msg and SRC_lapw2/compile.msg, respectively, for errors.
On 8/22/2018 8:42 AM, Lawal Mohammed wrote:
Dear Gavin,
Thank you very much for your help.
After rerun
See comments below.
here is correct inst configuration from attached struct file:
This configuration is uddu and not udud. Right?
The answer to the above question depends on how you define udud. It is
udud if you define it as follows.
For the "instgen_lapw -ask" input and case.inst below,
I believe 100,000 k-points was the set limit:
https://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/msg15219.html
On 8/24/2018 8:31 AM, Lukasz Plucinski wrote:
Dear All,
I tried 16 k-points (400x400) klist_band file, but I am getting
errors, and together with these errors hundreds
/*
On Thursday, August 23, 2018, 8:18:34 PM GMT+8, Gavin Abo
wrote:
In WIEN2k 18.2, I have in siteconfig:
Libraries:
F FFTW options: -DFFTW3 -I/home/username/fftw3/include
FFTW-LIBS: -L/home/username/fftw3/lib -lfftw3
FFTW-PLIBS
Regarding 2, fold2Bloch Guide [
https://github.com/rubel75/fold2Bloch-Wien2k/wiki/fold2Bloch-Guide ] and
Tutorial 1 [
https://github.com/rubel75/fold2Bloch-Wien2k/wiki/Tutorial-1:-Lattice-of-Hydrogen-atoms
] show that eigenvalues are Ry in case.f2b.
Regarding 1, the ubs_dots.m [
ifort: Command not found <- As it says, it cannot find ifort installed
on your system. When you installed ifort using install_GUI.sh (or
install.sh), did it finish without errors [
https://software.intel.com/en-us/articles/intel-compilers-for-linux-and-mac-os-x-compiler-installation-help
]?
RETURN to continue
On 8/16/2018 10:02 PM, Gavin Abo wrote:
It looks like you might have two different problems:
1) tcsh: bad interpreter: No such file or directory <- This usually
indicates that tcsh is not installed.
- If using Ubuntu, try installing tcsh using: sudo apt install t
Section "4.5.13 Nonlocal van der Waals functionals" on page 58 in the
WIEN2k 18.2 usersguide [1] has the switch "-nlvdw".
Is the switch "-innlvdw" in your command below okay?
[1] http://susi.theochem.tuwien.ac.at/reg_user/textbooks/usersguide.pdf
On 8/17/2018 3:42 PM, Dr. K. C. Bhamu wrote:
From WIEN2k 18.2 UG page 126:
WFFIL: standard option, writes wave functions to file case.vector
(needed in lapw2)
SUPWF: suppresses wave function calculation (faster for testing
eigenvalues only)
WFPRI: prints eigenvectors to case.output1 and writes case.vector
(produces long outputs!)
With
In WIEN2k 18.2, I have in siteconfig:
Libraries:
F FFTW options: -DFFTW3 -I/home/username/fftw3/include
FFTW-LIBS: -L/home/username/fftw3/lib -lfftw3
FFTW-PLIBS: -lfftw3_mpi
In my SRC_lapw0/compile.msg, I see:
-DFFTW3
With instgen_lapw, you specify just ud or dn in that case as you have
two nonequivalent positions. Thus, only the one u and one d that you
see in case.inst. However, you have a multiplicity of 2 for each of the
two nonequivalent positions. So one of the nonequivalent Fe positions
As the error message says, one possible cause is the connection being
blocked by a firewall.
Another possible cause is a ssh passwordless access problem:
https://stackoverflow.com/questions/19565795/unable-to-execute-mpich2-on-multiple-machines-on-ubuntu-12-04-hydu-sock-connect
Yet, another
e
mailto:physique.kar...@gmail.com>>
wrote:
*dear dr Gavin Abo*
actually, the problem was solved by adding the hostname in
the hosts file in all the nodes and not only in the
master node.
now the calculation works very
You should compile all programs again with siteconfig. However, before
you do that, you must change your compiler settings to target the
correct architecture for your system.
ifort -o ./nn struk.o variable_fields.o nn.o dirlat.o ord2.o
reduce_alloc.o bvan.o -O1 -FR -mp1 -w -prec_div -pc80
*Steps to reproduce possible siteconfig bug in WIEN2k 18.1:*
username@computername:~/WIEN2k$ grep parallel WIEN2k_COMPILER
parallel:
username@computername:~/WIEN2k$ ./siteconfig
...
Selection: O
...
Selection: PO
...
C Parallel Compiler:
...
Selection: C
...
Parallel compiler=mpif90
In case others encounter the same problem with installing WIEN2k 18.1.
Downloaded libxc-4.2.3.tar.gz from
http://www.tddft.org/programs/libxc/download/
Put it in my home directory, then in a terminal did:
username@computername:~/Desktop$ cd ~
username@computername:~$ ls libxc-4.2.3.tar.gz
the compile message attached
bellow. please help me
On Wed, Aug 29, 2018 at 6:34 AM Gavin Abo mailto:gs...@crimson.ua.edu>> wrote:
ifort: Command not found <- As it says, it cannot find ifort
installed on your system. When you installed ifort using
As I previously said, ilp64 is wrong, you should use lp64.
Also, with the given information, I doubt anybody can help you. What
BLAS and lapack libraries are you using as I don't see which ones you
are using in your R_LIBS? What are the compile.msg errors after your
BLAS and lapack settings
The compile.msg tells you exactly what is wrong:
error: /opt/libopenblas: No such file or directory
error: /opt/liblapack: No such file or directory
Using those BLAS and lapack, I don't know. Those might be operating
systems package ones. Maybe they are not installed [
You need to install and use BLAS.
I'm not as familiar with scalapack. I believe that is only needed for a
mpi parallel compile. The mpi is useless for a single computer [
https://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/msg03793.html
,
Are you using ELPA? WIEN2k 18.2 usersguide on page 129 says:
"Note: When using ELPA for MPI-parallel computations EMAX does NOT
determine the largest eigenvalue and is ignored. To increase the number
of computed eigenvalues in that case you have to increase nband."
Does it maybe need
Do a directory listing of your WIEN2k installation directory? Does a
non-zero nn file exist [
https://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/msg17699.html
], e.g.:
ls -l /home/wangzm/soft/wien2k_13/nn
If it does not exist, you need to compile WIEN2k to create it using
Search the WIEN2k and XCrySDen mailing list archives at
https://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/maillist.html
http://www.democritos.it/pipermail/xcrysden/
as the topic came up in the past; just last month in the WIEN2k list it
was reposted that XCrySDen's fermi surface
Which WIEN2k and wien2wannier (w2w) version is that error from? Looks
like it might be from WIEN2k 14.2 and w2w 1.0.
Many changes to WIEN2k [1] and w2w [2] have been made since then (which
fixed bugs that existed in the old versions). Have you tried the latest
WIEN2k 18.2 and w2w 2.0?
How are the several machines connected? If the machines are connected
using the currently typical 10/100 Mb/s, it is useless to do that [2].
As was mentioned before, you need either 1 Gb/s [3] or InfiniBand [4].
Are the machines setup to have common (NFS) filesystem [5,6]?
The given
I just tried and the xcrysden semishared binary package successfully ran
on openSUSE 15.0 installed on a USB stick. So I would expect a full
openSUSE install to be no different.
The installation process was very similar to CentOS, Fedora, and Ubuntu
[
So, are you saying gllb.scf was generated by "save_lapw gllb"? If so,
the "save_lapw gllb" is the save performed after your step 1 below
(corresponding to "save_lapw solid_GLLB" in [1]) or your step 2 below
(corresponding to save blablabla in [1]).
[1]
Was WIEN2k 17.1 previously installed on the same system? If so, did you
completely remove WIEN2k 17.1 or did you edit .bashrc (i.e., change the
WIENROOT variable to point to version 18.1 instead then use a new
terminal or reboot your system to properly reload the new .bashrc settings)?
On
The FAQ page [
http://susi.theochem.tuwien.ac.at/reg_user/faq/supercells.html ] says
you can also use special labels.
Probably, if you set all equivalent atoms as nonequivalent atoms in
StructGen using the special labels it will keep the 2x2x2 supercell that
you see in XCrySDen. However,
Did you notice in the siteconfig script of WIEN2k 18.1 how RP now only
seems to be coded to work for gfortran. For example lines 1334-1342:
if ($FC == "gfortran") then
echo ""
echo " Since you use gfortran you might need to specify
additional libraries."
echo " You have to
No output is showing after using the command "grep -ie error compile.msg".
This is regarding installation of Wien2k 17.1 version on a desktop PC
having core i7 with ubuntu
16.04 operating system, fortran compiler ifort, math libraries MKL.
Seems expected as your compile.msg below suggests
Have you tried installing bc, the GNU Command Line Calculator [
https://software.opensuse.org/package/bc ]?
I believe the openSUSE terminal command to install it is:
sudo zypper install bc
On 7/9/2018 5:21 AM, Dr. K. Balamurugan wrote:
Dear Wien2k developer and users,
I recently installed
This may be because libxc was compiled with a different compiler (like
gfortran) instead of with ifort, refer to the post at:
https://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/msg15222.html
Note: Instead of libxc 3.0.0, if you prefer to use the newer version of
libxc (4.0.3) [
In the terminal, type the command [1]: locale
Is LC_NUMERIC set to en_US.UTF-8? If Linux is installed with a language
other than English, the WIEN2k scripts like siteconfig_lapw sometimes
don't run properly.
The "if: Expression Syntax" can happen if one side of the operator in an
if
The ilp64 in your R_LIBS cannot be used for WIEN2k, you must use lp64 [
https://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/msg08707.html
].
For composer 2017, you might also need "-assume nobuffered_io" in the O
line [
The output below looks like it is from a *.error and case.dayfile.
While that is partially informative, it seems insufficient. So I doubt
anybody can help you with the given information. I suggest you look
further for additional error messages.
Usually such an error is accompanied with a
This looks like the WIEN2k 17.1 w2web bug reported before [1,2].
Are you using the fixed band.pl and scf.pl from the mailing list [3] or
band.patch and scf.patch [4] for WIEN2k 17.1?
[1]
https://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/msg16743.html
[2]
Did you add wannier90.x to the environmental PATH? [
https://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/msg05974.html ]
There are different ways to do that in Linux. Add it to the PATH in
.bashrc, add it to a bin folder that is in the PATH, etc.
For example, add it to $WIENROOT:
That w2web error with gfortran is due to bugs in the band.pl and scf.pl
files. You need to apply the fixed files given in the mailing list
archive [
http://zeus.theochem.tuwien.ac.at/pipermail/wien/2017-July/026651.html ,
Below steps on a WIEN2k install (using gfortran/cc, Ubuntu, OpenBLAS):
ubuntu@ubuntu:~$ lsb_release -a
No LSB modules are available.
Distributor ID: Ubuntu
Description: Ubuntu 16.04.4 LTS
Release: 16.04
Codename: xenial
ubuntu@ubuntu:~$ sudo add-apt-repository "deb
Currently don't know if it is related, but topic sounds similar to the
THETA and PHI I calculated before [
https://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/msg06838.html
] and reciprocal vectors used for klist_band [
There can be differences between the new and old scheme of setrmt_lapw.
To see what the differences are, try running setrmt_lapw for both the
new and old scheme, then compare what the differences are. For example,
like in the post:
Sounds fine to me, but keep in mind that if you change 1 inequivalent
position in StructGen, it should also change all equivalent positions
(seen in XCrySDen). Say you have 1 inequivalent position that has 2
equivalent positions. So if you change the 1 inequivalent, would be
changing 3 atoms
Thought of using "structeditor" (got to know from wien2k manual),
terminal returns "command not found".
In the terminal, do you see something like this:
username@computername:~/wiendata/TiC$ structeditor
structeditor: command not found
To use structeditor, see section "9.28.1 Execution' on
While I don't know the solution to that error, I can provide some comments.
If I remember correctly, I think the "error during read" means one of
two things. Either the stoso.vectorsoup was partially written in the
previous scf step or the stoso.vectorsoup was fully written but the
lapw2
Regarding the SupplMat-WIEN2k.pdf at
https://molmod.ugent.be/deltacodesdft
I could be wrong, but it seems to be referring to lnsmax and lmax in
case.in1 and GMAX in case.in2 as seen in the WIEN2k usersguide [
http://susi.theochem.tuwien.ac.at/reg_user/textbooks/usersguide.pdf ].
On
If it helps, my list in a README file of many (perhaps, most) of the
WIEN2k 17.1 fixes is at:
https://github.com/gsabo/WIEN2k-Patches/tree/master/17.1
On 4/13/2018 3:13 AM, Hyungjun Lee wrote:
Dear developers:
Now I am using WIEN2k 17.1 and found that there are some patches to
this
You may want to extract the original WIEN2k 17.1 l2main.F file from
SRC_lapw2 of WIEN2k_17.1.tar. Apply l2main.patch to it. If you do that,
the addtinv.f and timeinv1.f files have to be added to SRC_lapw2 and
lapw2Makefile.orig.patch must be applied as well.
If you go to:
The size limit as I recall applies to the entire email which includes
text and attachments. Usually, you can only send text to the list as
images are typically too large.
A solution to that can be to host the files somewhere else and provide a
link to it. There used to be a lot of sites you
It looks like the initialization finished okay in single mode as I see
"init_lapw finished ok" in the image.
The "PBS_NODEFILE: Undefined variable" indicates a problem with your
parallel setup or an Linux environment setup issue.
There might be a problem with how you setup your jobs file to
Sorry, I don't know which of the 2016/2017/2018 ifort/mkl versions are
more stable as I mentioned before [
https://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/msg16802.html
].
I would probably try the Update 2, Update 4, or try compiling with -O0
as Intel suggested on the webpage:
It depends on what Linux distribution you are using.
For example, if you are using Ubuntu, evince should be the default
PostScript viewer [ https://help.ubuntu.com/community/Evince ]. If not
installed, you should be able to install it with:
sudo apt-get install evince
If you are using
If you use a bash shell, try in .bashrc [
https://software.intel.com/en-us/forums/intel-fortran-compiler-for-linux-and-mac-os-x/topic/775542
]:
source /opt/intel/compilers_and_libraries_2018/linux/bin/compilervars.sh
intel64
If you use a csh shell, try in .cshrc:
source
Thanks, for the reply. I am using intel 2016. I did apply the patch
get_nloat.patch in SRC_lapwso but I still have the same problem.
Which 2016 ifort? I haven't used Update 3 (16.0.3.210) but that version
seemed particularly bad in mailing list posts probably because of the
unformatted
There are fixed band.pl and scf.pl files for WIEN2k 17.1 [1-4] in the
post [1] that you can use (or band.patch and scf.patch [5,6] at [7]
could be used instead).
If you choose to use the patch files. The following is what I do.
First, I go to [7]. I click on band.patch on the webpage, then
You need to add libopenblasp.so.0 to your Linux environment [
https://help.ubuntu.com/community/EnvironmentVariables ].
After installing WIEN2k with gfortran [
https://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/msg17175.html
], I seem to recall having a similar error.
If I recall
Some comments:
I haven't seen many mailing list posts about using a gfortran-based
mpi. That is probably because the clusters used for mpi are likely
systems that cost something like $100k to $1 millon. Those systems
usually seem to be running Intel MPI. So companies, computing centers,
e.com/wien@zeus.theochem.tuwien.ac.at/msg03243.html
https://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/msg06739.html
https://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/msg05054.html
On 3/3/2018 6:00 AM, karima Physique wrote:
Thank you very much Prof. Gavin Abo
I have another question about
to?
Thanks for your answer and your time
Regards
2018-02-19 20:29 GMT-08:00 Gavin Abo <gs...@crimson.ua.edu
<mailto:gs...@crimson.ua.edu>>:
What did you change the data toler value to? The 1.d-07 [
https://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/msg15787.html
<h
For "make" (serial wannier90.x and parallel postw90.x versions), it
looks like you need mpi installed. So try "make wannier" instead to
build only the serial wannier90.x.
Where did you run the "cp ./config/make.inc.ifort ./make.inc"? Maybe it
got executed in a different directory or
I think you mean case.in2 instead of case.inst.
Yes, if you add 8.5 [4.5 up + 4 dn] d core electrons to case.incup and
case.incdn to get NiO.incup_+.50 and NiO.incdn_+.50. You need to remove
8.5 d valence electrons by reducing the total number of electrons from
176 to 167.5 [= 176 - 8.5] in
As far as I know, WIEN2k still does not include a package to calculate
[
https://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/msg14478.html
].
For WIEN2k calculations, I have seen calculated with the
Gaspari-Gyorffy formula [ https://doi.org/10.1016/j.jallcom.2017.09.299
wien2wannier in WIEN2k 16.1 might be old and buggy. Trying to get the
new versions of wien2wannier and Wannier90 working with WIEN2k 16.1
might be more challenging for you. Thus, you might have better success
in using WIEN2k 17.1, using wien2wannier from the GitHub repository [
username@computername:~/wien/wiendata/NiO/NiO_+.50$ grepline :3dd001
'NiO.scf' 2 | head -2 | tail -1
NiO.scf::3DD001: 3D* 0.109619395 Ry [1]
username@computername:~/wien/wiendata/NiO/NiO_+.50$ grepline :3dd001
'NiO.scf' 2 | tail -1
NiO.scf::3DD001: 3D*
After you click the "Calculate density with XCrysden" button, 1) the
"Requires X-Windows system ... Calc" message appears immediately or 2)
does the XCrySDen program open, the "Choose 2D/3D Density Plot" window
appears (like that shown at
http://www.xcrysden.org/doc/wien.html#__toc__6 ), then
[renwei@ln3%th2 ~]$ which mpirun
/usr/local/mpi3/bin/mpirun
*31 mpirun: Command not found.*
Similar to the "manpath: command not found" and "libmpi.so.12 => not
found" errors that you say are gone now, the mpirun seems to be
installed okay on one of the nodes but it seems like it is not
/wien@zeus.theochem.tuwien.ac.at/msg10483.html
On 9/26/2018 9:51 PM, Dinesh Yadav wrote:
Dear Gavin Abo,
Most of the thing I have understood except few thing, can you
please suggest me,
1) How can I write an occupation in the case.dmatup/dn files that
gives the occupation I want ?
2) What
Step 1: Install the DFT program; learn how to do scf calculations with
unit cells, then supercells (with WIEN2k) [1].
- Phonon calculations use primitive cells [2].
Step 2: Research available phonon software (for WIEN2k) and decide which
one you will use.
- For
You likely need to use -lblas for libblas.so and -llapack for
liblapack.so installed with "sudo yum install lapack-devel".
A basic WIEN2k serial install with gfortran/cc on Fedora seems quite
similar to Ubuntu [
https://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/msg17911.html
,
Your job script below seems to missing scripting to create a .machines
file on the fly. So parallel calculations won't work if a .machines
file is not created according the FAQ [1] and WIEN2k 18.2 usersguide [2].
However, without a .machines file, the '-p' should be ignored by runsp,
so it
Maybe try running siteconfig like for the first time by removing the
WIEN2k_INSTALLDATE file in your WIEN2k install folder [1,2], for example
in a terminal:
[liveuser@localhost WIEN2k]$ rm WIEN2k_INSTALLDATE
[liveuser@localhost WIEN2k]$ ./siteconfig
Then, try selecting no for LIBXC like in
What does "ls -al ~/.ssh/config" give you?
That error is reproducible with Ubuntu 18.04.1 LTS:
username@computername:~$ cat ~/.ssh/config
Host *
HostName 127.0.0.1
User username
ForwardX11Trusted yes
GatewayPorts yes
GSSAPIAuthentication yes
FYI, when I have followed the instructions for setting up ssh
passwordless login using ssh-kgen given at the link below, it has always
gone well for me:
https://www.tecmint.com/ssh-passwordless-login-using-ssh-keygen-in-5-easy-steps/
First, you might want to check if you have the following
Type A should mean preserve symmetry, while Type B should be time
inversion of the symmetry:
https://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/msg15061.html
https://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/msg14326.html
On 10/29/2018 7:57 PM, 姜若诗 wrote:
Could anyone
FYI, it is recommended to use the new version 2 of BoltzTraP (called
BoltzTraP2):
https://www.imc.tuwien.ac.at/forschungsbereich_theoretische_chemie/forschungsgruppen/prof_dr_gkh_madsen_theoretical_materials_chemistry/boltztrap2/
Those gfortran warnings have been seen in symmetry [
https://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/msg17396.html
] and dstart [
https://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/msg17389.html
], which if I recall correctly were resolved by the fixes seen on the
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