I am having a similar issue, but I am not sure if its the same as other
people here. My system seems to freeze mostly when using Mozilla
Thunderbird, but that may be a red herring as I always have many other
applications open. It just happened in Firefox while trying to watch a
youtube video, and it happened last night while using the Youtube plugin
for Totem.

This didn't seem to happen when I was using an Nvidia graphics card. The
nvidia card was a PCI-E, now I am using a regular PCI Radeon card.

When the freeze occurs, the mouse still works, but no keyboard commands
seem to work. I do have a USB keyboard though.

When I try to VNC into the frozen machine it doesn't work. When I ssh
in, it works, but is very slow. When I check with the top command I see
that the Xorg process is using a huge amount of CPU as if its caught in
some infinite loop. So far no matter what I do, I have not been able to
kill the Xorg process but my guess is that if I could kill it, I could
restart it and get back into xwindows again (of course losing some of my
current session).

When I ssh in, if I use the reboot command, something happens, I am not
sure what. The ssh daemon seems to be shutdown as I can no longer ssh
in, but the machine never reboots.

The only thing that works is to ssh in and do:
sudo shutdown now -h
If I do the above I can walk away and generally when I come back the machine is 
off and I feel good knowing that it shut down properly to some extent. I have 
never waited around to see how long it actually takes to shutdown from there.

In any case, this does seem like a major issue! I love ubuntu and want
to get my clients, friends, family and associates to switch, but most
people wouldn't accept and deal with a problem like this (the way I do).

-- 
jaunty freezes suddenly
https://bugs.launchpad.net/bugs/347848
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