I have first-draft code to detect signatures of particular programs in
the post-MBR gap and avoid the relevant sectors when writing the GRUB
core image.  I'd like to inspect some data dumps first to confirm that
this strategy will be viable, and of course gathering the signatures
will probably be an ongoing process, but at least the necessary code in
GRUB does not appear to be very difficult.

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grub fails after running Windows
https://bugs.launchpad.net/bugs/441941
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