I have scoured the 'apt-get' documentation and am left to assume that
Ubuntu's Update Manager uses its own logic to allow for upgrading
packages selectively. This passage from apt-get's man-pages spells it
out clearly:

This is also the target to use if you want to upgrade one or more
already-installed packages without upgrading every package you have
on your system. Unlike the "upgrade" target, which installs the
newest version of all currently installed packages, "install" will
install the newest version of only the package(s) specified. Simply
provide the name of the package(s) you wish to upgrade, and if a
newer version is available, it (and its dependencies, as described
above) will be downloaded and installed.

So, even the apt-get manual states that 'apt-get install package-name'
should be used to upgrade packages selectively. This is exactly the
approach that Webmin has taken, and is exactly the reason that Apache
with Mod-PHP is mucked-up every time it's upgraded.

Am I asking the wrong questions? Or am I in the wrong place?

Thanks again.

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Server Team, which is subscribed to apache2 in Ubuntu.
https://bugs.launchpad.net/bugs/969426

Title:
  Apache fails to shutdown cleanly during update and removes libapache2
  -mod-php5 in the process, causing service restart to fail due to
  syntax errors in configuration

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