There is no reason to be honest. They can end up being in the same MSI in 
different features.
I have 2 MSI's now, because after migrating from 3.5 to 6, I decided to use 
Burn. This meant removing my Merge Modules (msm A & B) (since it's not 
recommended anyway).
So I converted them into msi's which was an easy change (MSI A and B).
The MSI which was adding the msm's together in 3.5 is now my bootstrapper, 
chaining the MSI's (A and B) together.
I will eventually merge them into 1, in multiple features.. This will not help 
with the problem I have though I think... It's going to be more elegant for 
sure;)

-----Original Message-----
From: Nick Ramirez [mailto:nickra...@hotmail.com]
Sent: 21 November 2012 14:41
To: wix-users@lists.sourceforge.net
Subject: Re: [WiX-users] Editing files from the Bootstrapper Application

I'm curious about your setup. What is it about it that make having two MSIs 
worthwhile? Did you not want to have two Features in a single MSI?

-----Original Message-----
From: Stelios Kyprou [mailto:stelios.kyp...@fcg.im]
Sent: 21 November 2012 12:34
To: General discussion for Windows Installer XML toolset.
Subject: [WiX-users] Editing files from the Bootstrapper Application

Hi there,
I'm having a Bootsrtapper application, where I have 2 msi's chained. A and B 
Msi A represents a codebase, that enables functionality based on a 
configuration file.
Msi B depends on A.
In the UI, I am planning to have a screen, where you can select what 
functionality you want from the product.
This will decide:
a) What to write to the config file when it is instlled via util:XmlConfig in 
MSI A
b) Whether to install MSI B.

What I want is:
When I run the BA again, if I change the desired functionality:
a)Update the config file based on new functionality b)Install/Delete MSI B if 
the functionality it provides is wanted/not wanted anymore.

What I am not sure about, is how to approach point (a). When I initially 
install, I can provide the values to insert in the config file to MSI A as a 
property.
But when I update my selection later on, how should I update this file? Are 
Features a good approach? If yes, does this mean I have to reference the same 
file in multiple features?
Or do I just do it in code in the BA, without invoking any MSI actions? (Do not 
Plan/Apply anything, just do the config edit action).

Thanks in advance
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