Hi Lahiru, I cleaned the repo and run the "mvn clean install -Dmodule=xbaya -o -Dmaven.test.skip=true"
[INFO] Scanning for projects... [ERROR] The build could not read 1 project -> [Help 1] [ERROR] [ERROR] The project org.apache.airavata:airavata:0.3-incubating-SNAPSHOT (/Users/fanye/temp/airavata-trunk/pom.xml) has 1 error [ERROR] Non-resolvable parent POM: The repository system is offline but the artifact org.apache:apache:pom:10 is not available in the local repository. and 'parent.relativePath' points at no local POM @ line 25, column 13 -> [Help 2] [ERROR] [ERROR] To see the full stack trace of the errors, re-run Maven with the -e switch. [ERROR] Re-run Maven using the -X switch to enable full debug logging. [ERROR] [ERROR] For more information about the errors and possible solutions, please read the following articles: [ERROR] [Help 1] http://cwiki.apache.org/confluence/display/MAVEN/ProjectBuildingException [ERROR] [Help 2] http://cwiki.apache.org/confluence/display/MAVEN/UnresolvableModelException Thanks Ye On Feb 6, 2012, at 5:35 PM, Lahiru Gunathilake wrote: > Hi Ye, > > IMO, Axiom error you are getting due to repository corruption. So please > clean your repo and do a new build. I think now you can run airavata with > tests. > > I just fixed the profile issue.. if you want you can invoke the profiles > like this, > > mvn clean install -Dmodule=xbaya -o -Dmaven.test.skip=true > > Lahiru > > On Mon, Feb 6, 2012 at 4:34 PM, Fan, Ye <fa...@illinois.edu> wrote: > >> Hi, >> >> Today, I tried to only build Xbaya module on my laptop. According to the >> build instruction, I ran "mvn clean install -Dmaven.test.skip=true >> -Dmodule=xbaya-gui" >> >> Instead of just build XBaya, I get: >> >> >> ==================================================================================================== >> .... >> [INFO] Compiling 10 source files to >> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/target/classes >> [INFO] >> ------------------------------------------------------------------------ >> [INFO] Reactor Summary: >> [INFO] >> [INFO] Airavata .......................................... SUCCESS [1.239s] >> [INFO] Airavata Commons .................................. SUCCESS [0.022s] >> [INFO] Airavata GFac Schema Utilities .................... SUCCESS [4.759s] >> [INFO] Airavata Common Utilities ......................... SUCCESS [0.592s] >> [INFO] Airavata Common Registry API ...................... SUCCESS [0.599s] >> [INFO] Airavata Registry API ............................. SUCCESS [0.633s] >> [INFO] Airavata Workflow Execution Context ............... SUCCESS [1.929s] >> [INFO] Airavata-WS-Messenger ............................. SUCCESS [0.023s] >> [INFO] Messenger Commons ................................. FAILURE [0.344s] >> [INFO] Messenger Client .................................. SKIPPED >> [INFO] Airavata Workflow Tracking ........................ SKIPPED >> [INFO] GFac-Core ......................................... SKIPPED >> [INFO] GFac-Axis2-Interface .............................. SKIPPED >> [INFO] MessageBox ........................................ SKIPPED >> [INFO] Message Broker .................................... SKIPPED >> [INFO] distribution ...................................... SKIPPED >> [INFO] Airavata XBaya .................................... SKIPPED >> [INFO] Simple Math Service ............................... SKIPPED >> [INFO] Complex Math Service .............................. SKIPPED >> [INFO] Levenshtein Distance Service ...................... SKIPPED >> [INFO] distribution ...................................... SKIPPED >> [INFO] Test-Suite ........................................ SKIPPED >> [INFO] >> ------------------------------------------------------------------------ >> [INFO] BUILD FAILURE >> [INFO] >> ------------------------------------------------------------------------ >> [INFO] Total time: 10.535s >> [INFO] Finished at: Mon Feb 06 15:31:27 CST 2012 >> [INFO] Final Memory: 23M/81M >> [INFO] >> ------------------------------------------------------------------------ >> [ERROR] Failed to execute goal >> org.apache.maven.plugins:maven-compiler-plugin:2.0.2:compile >> (default-compile) on project messenger-commons: Compilation failure: >> Compilation failure: >> [ERROR] >> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/NameSpaceConstants.java:[24,26] >> package org.apache.axiom.om does not exist >> [ERROR] >> [ERROR] >> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/NameSpaceConstants.java:[25,26] >> package org.apache.axiom.om does not exist >> [ERROR] >> [ERROR] >> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/NameSpaceConstants.java:[26,26] >> package org.apache.axiom.om does not exist >> [ERROR] >> [ERROR] >> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/NameSpaceConstants.java:[30,24] >> cannot find symbol >> [ERROR] symbol : class OMFactory >> [ERROR] location: class org.apache.airavata.wsmg.commons.NameSpaceConstants >> [ERROR] >> [ERROR] >> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/NameSpaceConstants.java:[32,24] >> cannot find symbol >> [ERROR] symbol : class OMNamespace >> [ERROR] location: class org.apache.airavata.wsmg.commons.NameSpaceConstants >> [ERROR] >> [ERROR] >> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/NameSpaceConstants.java:[35,24] >> cannot find symbol >> [ERROR] symbol : class OMNamespace >> [ERROR] location: class org.apache.airavata.wsmg.commons.NameSpaceConstants >> [ERROR] >> [ERROR] >> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/NameSpaceConstants.java:[38,24] >> cannot find symbol >> [ERROR] symbol : class OMNamespace >> [ERROR] location: class org.apache.airavata.wsmg.commons.NameSpaceConstants >> [ERROR] >> [ERROR] >> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/NameSpaceConstants.java:[43,24] >> cannot find symbol >> [ERROR] symbol : class OMNamespace >> [ERROR] location: class org.apache.airavata.wsmg.commons.NameSpaceConstants >> [ERROR] >> [ERROR] >> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/NameSpaceConstants.java:[51,24] >> cannot find symbol >> [ERROR] symbol : class OMNamespace >> [ERROR] location: class org.apache.airavata.wsmg.commons.NameSpaceConstants >> [ERROR] >> [ERROR] >> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/NameSpaceConstants.java:[54,24] >> cannot find symbol >> [ERROR] symbol : class OMNamespace >> [ERROR] location: class org.apache.airavata.wsmg.commons.NameSpaceConstants >> [ERROR] >> [ERROR] >> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/NameSpaceConstants.java:[63,24] >> cannot find symbol >> [ERROR] symbol : class OMNamespace >> [ERROR] location: class org.apache.airavata.wsmg.commons.NameSpaceConstants >> [ERROR] >> [ERROR] >> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/NameSpaceConstants.java:[66,24] >> cannot find symbol >> [ERROR] symbol : class OMNamespace >> [ERROR] location: class org.apache.airavata.wsmg.commons.NameSpaceConstants >> [ERROR] >> [ERROR] >> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/NameSpaceConstants.java:[74,24] >> cannot find symbol >> [ERROR] symbol : class OMNamespace >> [ERROR] location: class org.apache.airavata.wsmg.commons.NameSpaceConstants >> [ERROR] >> [ERROR] >> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/CommonRoutines.java:[47,26] >> package org.apache.axiom.om does not exist >> [ERROR] >> [ERROR] >> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/CommonRoutines.java:[48,26] >> package org.apache.axiom.om does not exist >> [ERROR] >> [ERROR] >> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/CommonRoutines.java:[49,39] >> package org.apache.axiom.om.impl.builder does not exist >> [ERROR] >> [ERROR] >> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/CommonRoutines.java:[50,31] >> package org.apache.axiom.om.util does not exist >> [ERROR] >> [ERROR] >> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/CommonRoutines.java:[51,28] >> package org.apache.axiom.soap does not exist >> [ERROR] >> [ERROR] >> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/CommonRoutines.java:[52,28] >> package org.apache.axiom.soap does not exist >> [ERROR] >> [ERROR] >> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/CommonRoutines.java:[53,28] >> package org.apache.axiom.soap does not exist >> [ERROR] >> [ERROR] >> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/CommonRoutines.java:[54,41] >> package org.apache.axiom.soap.impl.builder does not exist >> [ERROR] >> [ERROR] >> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/CommonRoutines.java:[88,18] >> cannot find symbol >> [ERROR] symbol : class SOAPEnvelope >> [ERROR] location: class org.apache.airavata.wsmg.commons.CommonRoutines >> [ERROR] >> [ERROR] >> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/CommonRoutines.java:[105,18] >> cannot find symbol >> [ERROR] symbol : class OMElement >> [ERROR] location: class org.apache.airavata.wsmg.commons.CommonRoutines >> [ERROR] >> [ERROR] >> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/CommonRoutines.java:[114,36] >> cannot find symbol >> [ERROR] symbol : class OMElement >> [ERROR] location: class org.apache.airavata.wsmg.commons.CommonRoutines >> [ERROR] >> [ERROR] >> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/CommonRoutines.java:[196,12] >> cannot find symbol >> [ERROR] symbol : class OMElement >> [ERROR] location: class org.apache.airavata.wsmg.commons.CommonRoutines >> [ERROR] >> [ERROR] >> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/NameSpaceConstants.java:[30,44] >> cannot find symbol >> [ERROR] symbol : variable OMAbstractFactory >> [ERROR] location: class org.apache.airavata.wsmg.commons.NameSpaceConstants >> [ERROR] >> [ERROR] >> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/CommonRoutines.java:[92,8] >> cannot find symbol >> [ERROR] symbol : class StAXSOAPModelBuilder >> [ERROR] location: class org.apache.airavata.wsmg.commons.CommonRoutines >> [ERROR] >> [ERROR] >> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/CommonRoutines.java:[92,43] >> cannot find symbol >> [ERROR] symbol : class StAXSOAPModelBuilder >> [ERROR] location: class org.apache.airavata.wsmg.commons.CommonRoutines >> [ERROR] >> [ERROR] >> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/CommonRoutines.java:[93,8] >> cannot find symbol >> [ERROR] symbol : class SOAPEnvelope >> [ERROR] location: class org.apache.airavata.wsmg.commons.CommonRoutines >> [ERROR] >> [ERROR] >> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/CommonRoutines.java:[109,8] >> cannot find symbol >> [ERROR] symbol : class StAXOMBuilder >> [ERROR] location: class org.apache.airavata.wsmg.commons.CommonRoutines >> [ERROR] >> [ERROR] >> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/CommonRoutines.java:[109,36] >> cannot find symbol >> [ERROR] symbol : class StAXOMBuilder >> [ERROR] location: class org.apache.airavata.wsmg.commons.CommonRoutines >> [ERROR] >> [ERROR] >> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/CommonRoutines.java:[110,8] >> cannot find symbol >> [ERROR] symbol : class OMElement >> [ERROR] location: class org.apache.airavata.wsmg.commons.CommonRoutines >> [ERROR] >> [ERROR] >> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/CommonRoutines.java:[189,26] >> cannot find symbol >> [ERROR] symbol : variable UUIDGenerator >> [ERROR] location: class org.apache.airavata.wsmg.commons.CommonRoutines >> [ERROR] >> [ERROR] >> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/CommonRoutines.java:[198,8] >> cannot find symbol >> [ERROR] symbol : class SOAPFactory >> [ERROR] location: class org.apache.airavata.wsmg.commons.CommonRoutines >> [ERROR] >> [ERROR] >> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/CommonRoutines.java:[198,34] >> cannot find symbol >> [ERROR] symbol : variable OMAbstractFactory >> [ERROR] location: class org.apache.airavata.wsmg.commons.CommonRoutines >> [ERROR] >> [ERROR] >> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/CommonRoutines.java:[200,8] >> cannot find symbol >> [ERROR] symbol : class SOAPHeaderBlock >> [ERROR] location: class org.apache.airavata.wsmg.commons.CommonRoutines >> [ERROR] >> [ERROR] >> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/CommonRoutines.java:[201,22] >> cannot find symbol >> [ERROR] symbol : variable UUIDGenerator >> [ERROR] location: class org.apache.airavata.wsmg.commons.CommonRoutines >> [ERROR] >> [ERROR] >> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/CommonRoutines.java:[203,8] >> cannot find symbol >> [ERROR] symbol : class SOAPHeaderBlock >> [ERROR] location: class org.apache.airavata.wsmg.commons.CommonRoutines >> [ERROR] >> [ERROR] >> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/CommonRoutines.java:[206,8] >> cannot find symbol >> [ERROR] symbol : class SOAPHeaderBlock >> [ERROR] location: class org.apache.airavata.wsmg.commons.CommonRoutines >> [ERROR] >> [ERROR] >> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/CommonRoutines.java:[209,14] >> cannot access org.apache.axiom.om.OMElement >> [ERROR] class file for org.apache.axiom.om.OMElement not found >> [ERROR] client.addHeader(action); >> [ERROR] >> [ERROR] >> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/CommonRoutines.java:[210,14] >> cannot access org.apache.axiom.soap.SOAPHeaderBlock >> [ERROR] class file for org.apache.axiom.soap.SOAPHeaderBlock not found >> [ERROR] client.addHeader(msgId); >> [ERROR] >> [ERROR] >> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/CommonRoutines.java:[213,13] >> cannot find symbol >> [ERROR] symbol : class OMElement >> [ERROR] location: class org.apache.airavata.wsmg.commons.CommonRoutines >> [ERROR] >> [ERROR] >> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/CommonRoutines.java:[215,57] >> package org.apache.axiom.om.util does not exist >> [ERROR] -> [Help 1] >> [ERROR] >> [ERROR] To see the full stack trace of the errors, re-run Maven with the >> -e switch. >> [ERROR] Re-run Maven using the -X switch to enable full debug logging. >> [ERROR] >> [ERROR] For more information about the errors and possible solutions, >> please read the following articles: >> [ERROR] [Help 1] >> http://cwiki.apache.org/confluence/display/MAVEN/MojoFailureException >> [ERROR] >> [ERROR] After correcting the problems, you can resume the build with the >> command >> [ERROR] mvn <goals> -rf :messenger-commons >> >> >> ==================================================================================================== >> >> Help please. >> >> Thanks >> Ye >> >> On Feb 4, 2012, at 1:53 AM, Lahiru Gunathilake wrote: >> >>> I just built latest trunk, and started servers and didn't see any >> exception >>> like this... can you stop airavta-server script, and then delete >> directory >>> AIRAVATA_HOME(directory that you extracted >>> tar.gz)/standalone-server/bin/wsmg and start airavata-server.sh again. >>> >>> Regards >>> Lahiru >>> >>> On Fri, Feb 3, 2012 at 4:39 PM, Fan, Ye <fa...@illinois.edu> wrote: >>> >>>> Hi, >>>> >>>> Yes, I found "apache-airavata-0.2-incubating-SNAPSHOT-bin.tar.gz" in >>>> "airavata-trunk/modules/distribution/target". >>>> >>>> And FYI, after started jackrabbit-server and airavata-server, I >>>> periodically see this exception in command line. So far, I haven't >>>> interacted with service yet. >>>> >>>> 3602507 [Thread-4] ERROR >>>> org.apache.airavata.wsmg.commons.storage.ConnectionPool - Cannot close a >>>> connection while a transaction is still active. >>>> java.sql.SQLException: Cannot close a connection while a transaction is >>>> still active. >>>> at >>>> org.apache.derby.impl.jdbc.SQLExceptionFactory40.getSQLException(Unknown >>>> Source) >>>> at org.apache.derby.impl.jdbc.Util.newEmbedSQLException(Unknown >>>> Source) >>>> at org.apache.derby.impl.jdbc.Util.newEmbedSQLException(Unknown >>>> Source) >>>> at org.apache.derby.impl.jdbc.Util.generateCsSQLException(Unknown >>>> Source) >>>> at >>>> org.apache.derby.impl.jdbc.EmbedConnection.newSQLException(Unknown >> Source) >>>> at >>>> >> org.apache.derby.impl.jdbc.EmbedConnection.checkForTransactionInProgress(Unknown >>>> Source) >>>> at org.apache.derby.impl.jdbc.EmbedConnection.close(Unknown >> Source) >>>> at >>>> >> org.apache.airavata.wsmg.commons.storage.ConnectionPool.closeStaleConnections(ConnectionPool.java:244) >>>> at >>>> >> org.apache.airavata.wsmg.commons.storage.ConnectionPool.access$200(ConnectionPool.java:40) >>>> at >>>> >> org.apache.airavata.wsmg.commons.storage.ConnectionPool$CleanUpThread.run(ConnectionPool.java:335) >>>> at java.lang.Thread.run(Thread.java:619) >>>> Caused by: java.sql.SQLException: Cannot close a connection while a >>>> transaction is still active. >>>> at >>>> org.apache.derby.impl.jdbc.SQLExceptionFactory.getSQLException(Unknown >>>> Source) >>>> at >>>> >> org.apache.derby.impl.jdbc.SQLExceptionFactory40.wrapArgsForTransportAcrossDRDA(Unknown >>>> Source) >>>> ... 11 more >>>> 3630031 [Thread-14] INFO >>>> org.apache.airavata.wsmg.commons.storage.JdbcStorage - Problem: 0 rows >>>> affected by insert/update/delete statement. >>>> >>>> Thanks >>>> Ye >>>> >>>> >>>> On Feb 3, 2012, at 2:09 PM, Lahiru Gunathilake wrote: >>>> >>>>> Hi Ye, >>>>> >>>>> Please find the binary pack get created after a successful build in >>>>> airavata/trunk/modules/distribution/target and follow the article with >>>> the >>>>> zip/tar.gz created. >>>>> >>>>> Lahiru >>>>> >>>>> On Fri, Feb 3, 2012 at 12:41 PM, Suresh Marru <sma...@apache.org> >> wrote: >>>>> >>>>>> Hi Ye, >>>>>> >>>>>> Once your build is successful you will see a >>>>>> apache-airavata-0.3-incubating-bin.zip (or tar.gz), once you untar it >>>> you >>>>>> will now see the binary environment the tutorials points to. We will >>>> update >>>>>> this in the document. The scripts within this binary should point to >>>> right >>>>>> paths. Let us know is you are still having problems with them. >>>>>> >>>>>> Suresh >>>>>> >>>>>> On Feb 3, 2012, at 12:27 PM, Fan, Ye wrote: >>>>>> >>>>>>> Marlon, >>>>>>> >>>>>>> Yes, I've already seen those documents. The thing is there is no >>>>>> downloadable release version now. So I didn't see those scripts >> earlier. >>>>>> Anyway, I found them in >>>>>> "airavata-trunk/modules/distribution/src/main/resources/bin" now and >>>> tried >>>>>> to run it: >>>>>>> "./airavata-server.sh: line 21: cd: >>>>>> >>>> >> /home/gridchem/airavata-trunk/modules/distribution/src/main/resources/standalone-server/bin: >>>>>> No such file or directory >>>>>>> ./airavata-server.sh: line 22: ./axis2server.sh: No such file or >>>>>> directory" >>>>>>> >>>>>>> It looks like "$AIRAVATA_HOME" is not set correctly since I saw "cd >>>>>> $AIRAVATA_HOME/standalone-server/bin" in airavata-server.sh. So, what >>>>>> should it be in self-build situation? >>>>>>> >>>>>>> Suresh, >>>>>>> >>>>>>> I did clean install. >>>>>>> >>>>>>> Saminda, >>>>>>> >>>>>>> Will give it a try later. >>>>>>> >>>>>>> Thanks >>>>>>> Ye >>>>>>> >>>>>>> >>>>>>> On Feb 3, 2012, at 10:54 AM, Marlon Pierce wrote: >>>>>>> >>>>>>>> -----BEGIN PGP SIGNED MESSAGE----- >>>>>>>> Hash: SHA1 >>>>>>>> >>>>>>>> Hi Ye, see >>>>>> >>>> >> http://incubator.apache.org/airavata/documentation/system/airavata-in-5-minutes.htmland >>>>>> >>>> >> http://incubator.apache.org/airavata/documentation/system/airavata-in-10-minutes.html >>>>>>>> >>>>>>>> >>>>>>>> Marlon >>>>>>>> >>>>>>>> >>>>>>>> On 2/3/12 11:51 AM, Fan, Ye wrote: >>>>>>>>> The build without test passed. >>>>>>>>> >>>>>>>>> Can you please tell me what service I need to start to actually >> run a >>>>>> workflow in XBaya? >>>>>>>>> >>>>>>>>> I have these folder in "modules". >>>>>>>>> >>>>>>>>> "commons distribution gfac-axis2 gfac-core test-suite >>>>>> workflow-interpreter ws-messenger xbaya-gui" >>>>>>>>> >>>>>>>>> Thanks >>>>>>>>> Ye >>>>>>>>> >>>>>>>>> On Feb 3, 2012, at 10:27 AM, Fan, Ye wrote: >>>>>>>>> >>>>>>>>>> Hi, >>>>>>>>>> >>>>>>>>>> I've update the code and tried to rebuild the code again. Still no >>>>>> good. Will try to build without test. >>>>>>>>>> >>>>>>>>>> Error: >>>>>>>>>> >>>>>>>>>> ....... >>>>>>>>>> ....... >>>>>>>>>> Caused by: >> org.apache.jackrabbit.core.config.ConfigurationException: >>>>>> Workspace directory already exists: default >>>>>>>>>> at >>>>>> >>>> >> org.apache.jackrabbit.core.config.RepositoryConfig.internalCreateWorkspaceConfig(RepositoryConfig.java:732) >>>>>>>>>> at >>>>>> >>>> >> org.apache.jackrabbit.core.config.RepositoryConfig.createWorkspaceConfig(RepositoryConfig.java:866) >>>>>>>>>> at >>>>>> >>>> >> org.apache.jackrabbit.core.config.RepositoryConfig.init(RepositoryConfig.java:594) >>>>>>>>>> at >>>>>> >>>> >> org.apache.jackrabbit.core.config.RepositoryConfig.create(RepositoryConfig.java:347) >>>>>>>>>> at >>>>>> >>>> >> org.apache.jackrabbit.core.config.RepositoryConfig.install(RepositoryConfig.java:157) >>>>>>>>>> at >>>>>> >>>> >> org.apache.jackrabbit.core.TransientRepository$3.getRepository(TransientRepository.java:250) >>>>>>>>>> ... 36 more >>>>>>>>>> java.lang.NullPointerException >>>>>>>>>> Tests run: 2, Failures: 1, Errors: 0, Skipped: 0, Time elapsed: >>>> 0.218 >>>>>> sec <<< FAILURE! >>>>>>>>>> ....... >>>>>>>>>> ....... >>>>>>>>>> ....... >>>>>>>>>> Tests run: 11, Failures: 3, Errors: 0, Skipped: 0 >>>>>>>>>> >>>>>>>>>> [INFO] >>>>>> >> ------------------------------------------------------------------------ >>>>>>>>>> [INFO] Reactor Summary: >>>>>>>>>> [INFO] >>>>>>>>>> [INFO] Airavata .......................................... SUCCESS >>>>>> [7.628s] >>>>>>>>>> [INFO] Airavata Commons .................................. SUCCESS >>>>>> [0.116s] >>>>>>>>>> [INFO] Airavata GFac Schema Utilities .................... SUCCESS >>>>>> [31.148s] >>>>>>>>>> [INFO] Airavata Common Utilities ......................... SUCCESS >>>>>> [7.114s] >>>>>>>>>> [INFO] Airavata Common Registry API ...................... SUCCESS >>>>>> [6.834s] >>>>>>>>>> [INFO] Airavata Registry API ............................. FAILURE >>>>>> [21.393s] >>>>>>>>>> [INFO] Airavata Workflow Execution Context ............... SKIPPED >>>>>>>>>> [INFO] Airavata-WS-Messenger ............................. SKIPPED >>>>>>>>>> [INFO] Messenger Commons ................................. SKIPPED >>>>>>>>>> [INFO] Messenger Client .................................. SKIPPED >>>>>>>>>> [INFO] Airavata Workflow Tracking ........................ SKIPPED >>>>>>>>>> [INFO] GFac-Core ......................................... SKIPPED >>>>>>>>>> [INFO] GFac-Axis2-Interface .............................. SKIPPED >>>>>>>>>> [INFO] MessageBox ........................................ SKIPPED >>>>>>>>>> [INFO] Message Broker .................................... SKIPPED >>>>>>>>>> [INFO] distribution ...................................... SKIPPED >>>>>>>>>> [INFO] Airavata XBaya .................................... SKIPPED >>>>>>>>>> [INFO] Simple Math Service ............................... SKIPPED >>>>>>>>>> [INFO] Complex Math Service .............................. SKIPPED >>>>>>>>>> [INFO] Levenshtein Distance Service ...................... SKIPPED >>>>>>>>>> [INFO] distribution ...................................... SKIPPED >>>>>>>>>> [INFO] Test-Suite ........................................ SKIPPED >>>>>>>>>> [INFO] >>>>>> >> ------------------------------------------------------------------------ >>>>>>>>>> [INFO] BUILD FAILURE >>>>>>>>>> [INFO] >>>>>> >> ------------------------------------------------------------------------ >>>>>>>>>> [INFO] Total time: 1:16.010s >>>>>>>>>> [INFO] Finished at: Fri Feb 03 16:10:08 EST 2012 >>>>>>>>>> [INFO] Final Memory: 35M/85M >>>>>>>>>> [INFO] >>>>>> >> ------------------------------------------------------------------------ >>>>>>>>>> [ERROR] Failed to execute goal >>>>>> org.apache.maven.plugins:maven-surefire-plugin:2.10:test >> (default-test) >>>> on >>>>>> project registry-api: There are test failures. >>>>>>>>>> [ERROR] >>>>>>>>>> [ERROR] Please refer to >>>>>> >>>> >> /home/gridchem/airavata-trunk/modules/commons/registry-api/target/surefire-reports >>>>>> for the individual test results. >>>>>>>>>> >>>>>>>>>> Thanks >>>>>>>>>> Ye >>>>>>>>>> >>>>>>>>>> >>>>>>>>>> On Feb 2, 2012, at 10:22 PM, Lahiru Gunathilake wrote: >>>>>>>>>> >>>>>>>>>>> Hi Ye, >>>>>>>>>>> >>>>>>>>>>> Just fixed the build error, please take svn up and build again, >> if >>>>>> you >>>>>>>>>>> have any further issues, please post in to the list.. >>>>>>>>>>> >>>>>>>>>>> Regards >>>>>>>>>>> Lahiru >>>>>>>>>>> >>>>>>>>>>> On Thu, Feb 2, 2012 at 5:41 PM, Heshan Suriyaarachchi < >>>>>>>>>>> heshan.suriyaarach...@gmail.com> wrote: >>>>>>>>>>> >>>>>>>>>>>> Hi Ye, >>>>>>>>>>>> >>>>>>>>>>>> You can skip the test and build using the following command. >>>>>>>>>>>> mvn clean install -Dmaven.test.skip=true >>>>>>>>>>>> >>>>>>>>>>>> I came across this test failure now. We will have a look at it. >> In >>>>>> the >>>>>>>>>>>> meantime, if you need to try out a stable version you can have a >>>>>> look at >>>>>>>>>>>> the branch[1]. >>>>>>>>>>>> >>>>>>>>>>>> [1] - >>>>>>>>>>>> >>>>>>>>>>>> >>>>>> >>>> >> https://svn.apache.org/repos/asf/incubator/airavata/branches/0.2-incubating-SNAPSHOT >>>>>>>>>>>> >>>>>>>>>>>> On Thu, Feb 2, 2012 at 5:10 PM, Heshan Suriyaarachchi < >>>>>>>>>>>> heshan.suriyaarach...@gmail.com> wrote: >>>>>>>>>>>> >>>>>>>>>>>>> Hi Ye, >>>>>>>>>>>>> >>>>>>>>>>>>> Thanks for your interest in Airavata. Can you have a look at >> the >>>>>> logs in >>>>>>>>>>>>> directory /home/gridchem/airavata-trunk/ >>>>>>>>>>>>> modules/ws-messenger/messagebox/target/surefire-reports and see >>>>>> what >>>>>>>>>>>> tests >>>>>>>>>>>>> are failing. >>>>>>>>>>>>> >>>>>>>>>>>>> >>>>>>>>>>>>> On Thu, Feb 2, 2012 at 4:51 PM, Fan, Ye <fa...@illinois.edu> >>>>>> wrote: >>>>>>>>>>>>> >>>>>>>>>>>>>> Hi, >>>>>>>>>>>>>> >>>>>>>>>>>>>> I'm Ye Fan from NCSA at University of Illinois at >>>>>> Urbana-Champaign. I'm >>>>>>>>>>>>>> trying to get the Aivarata workflow suite running on >>>>>>>>>>>>>> gw26.qurray.iu.teragrid.org. >>>>>>>>>>>>>> >>>>>>>>>>>>>> I've followed the instruction: >>>>>>>>>>>>>> Check out the code from svn: "svn co >>>>>>>>>>>>>> https://svn.apache.org/repos/asf/incubator/airavata/trunk/";. >>>>>>>>>>>>>> Make sure the java version is: 1.6.0_19. >>>>>>>>>>>>>> Make sure the maven version is: "Apache Maven 3.0.4 (r1232337; >>>>>>>>>>>> 2012-01-17 >>>>>>>>>>>>>> 03:44:56-0500)". >>>>>>>>>>>>>> >>>>>>>>>>>>>> However, no matter I build with "mvn clean install" or "mvn >>>> clean >>>>>>>>>>>> install >>>>>>>>>>>>>> -DskipTests", I get errors: >>>>>>>>>>>>>> >>>>>>>>>>>>>> [INFO] >>>>>>>>>>>>>> >>>>>> >> ------------------------------------------------------------------------ >>>>>>>>>>>>>> [INFO] Reactor Summary: >>>>>>>>>>>>>> [INFO] >>>>>>>>>>>>>> [INFO] Airavata .......................................... >>>> SUCCESS >>>>>>>>>>>>>> [7.523s] >>>>>>>>>>>>>> [INFO] Airavata Commons .................................. >>>> SUCCESS >>>>>>>>>>>>>> [0.102s] >>>>>>>>>>>>>> [INFO] Airavata GFac Schema Utilities .................... >>>> SUCCESS >>>>>>>>>>>>>> [30.255s] >>>>>>>>>>>>>> [INFO] Airavata Common Utilities ......................... >>>> SUCCESS >>>>>>>>>>>>>> [6.998s] >>>>>>>>>>>>>> [INFO] Airavata Common Registry API ...................... >>>> SUCCESS >>>>>>>>>>>>>> [6.801s] >>>>>>>>>>>>>> [INFO] Airavata Registry API ............................. >>>> SUCCESS >>>>>>>>>>>>>> [4:22.340s] >>>>>>>>>>>>>> [INFO] Airavata Workflow Execution Context ............... >>>> SUCCESS >>>>>>>>>>>>>> [14.873s] >>>>>>>>>>>>>> [INFO] Airavata-WS-Messenger ............................. >>>> SUCCESS >>>>>>>>>>>>>> [0.102s] >>>>>>>>>>>>>> [INFO] Messenger Commons ................................. >>>> SUCCESS >>>>>>>>>>>>>> [10.284s] >>>>>>>>>>>>>> [INFO] Messenger Client .................................. >>>> SUCCESS >>>>>>>>>>>>>> [10.984s] >>>>>>>>>>>>>> [INFO] Airavata Workflow Tracking ........................ >>>> SUCCESS >>>>>>>>>>>>>> [23.850s] >>>>>>>>>>>>>> [INFO] GFac-Core ......................................... >>>> SUCCESS >>>>>>>>>>>>>> [19.056s] >>>>>>>>>>>>>> [INFO] GFac-Axis2-Interface .............................. >>>> SUCCESS >>>>>>>>>>>>>> [24.018s] >>>>>>>>>>>>>> [INFO] MessageBox ........................................ >>>> FAILURE >>>>>>>>>>>>>> [1:14.598s] >>>>>>>>>>>>>> [INFO] Message Broker .................................... >>>> SKIPPED >>>>>>>>>>>>>> [INFO] distribution ...................................... >>>> SKIPPED >>>>>>>>>>>>>> [INFO] Airavata XBaya .................................... >>>> SKIPPED >>>>>>>>>>>>>> [INFO] Simple Math Service ............................... >>>> SKIPPED >>>>>>>>>>>>>> [INFO] Complex Math Service .............................. >>>> SKIPPED >>>>>>>>>>>>>> [INFO] Levenshtein Distance Service ...................... >>>> SKIPPED >>>>>>>>>>>>>> [INFO] distribution ...................................... >>>> SKIPPED >>>>>>>>>>>>>> [INFO] Test-Suite ........................................ >>>> SKIPPED >>>>>>>>>>>>>> [INFO] >>>>>>>>>>>>>> >>>>>> >> ------------------------------------------------------------------------ >>>>>>>>>>>>>> [INFO] BUILD FAILURE >>>>>>>>>>>>>> [INFO] >>>>>>>>>>>>>> >>>>>> >> ------------------------------------------------------------------------ >>>>>>>>>>>>>> [INFO] Total time: 8:13.569s >>>>>>>>>>>>>> [INFO] Finished at: Thu Feb 02 21:43:55 EST 2012 >>>>>>>>>>>>>> [INFO] Final Memory: 44M/151M >>>>>>>>>>>>>> [INFO] >>>>>>>>>>>>>> >>>>>> >> ------------------------------------------------------------------------ >>>>>>>>>>>>>> [ERROR] Failed to execute goal >>>>>>>>>>>>>> org.apache.maven.plugins:maven-surefire-plugin:2.10:test >>>>>> (default-test) >>>>>>>>>>>> on >>>>>>>>>>>>>> project messagebox: There are test failures. >>>>>>>>>>>>>> [ERROR] >>>>>>>>>>>>>> [ERROR] Please refer to >>>>>>>>>>>>>> >>>>>>>>>>>> >>>>>> >>>> >> /home/gridchem/airavata-trunk/modules/ws-messenger/messagebox/target/surefire-reports >>>>>>>>>>>>>> for the individual test results. >>>>>>>>>>>>>> >>>>>>>>>>>>>> Please help. >>>>>>>>>>>>>> >>>>>>>>>>>>>> Thanks >>>>>>>>>>>>>> Ye >>>>>>>>>>>>>> >>>>>>>>>>>>>> >>>>>>>>>>>>>> >>>>>>>>>>>>>> >>>>>>>>>>>>> >>>>>>>>>>>>> >>>>>>>>>>>>> -- >>>>>>>>>>>>> Regards, >>>>>>>>>>>>> Heshan Suriyaarachchi >>>>>>>>>>>>> >>>>>>>>>>>>> http://heshans.blogspot.com/ >>>>>>>>>>>>> >>>>>>>>>>>> >>>>>>>>>>>> >>>>>>>>>>>> >>>>>>>>>>>> -- >>>>>>>>>>>> Regards, >>>>>>>>>>>> Heshan Suriyaarachchi >>>>>>>>>>>> >>>>>>>>>>>> http://heshans.blogspot.com/ >>>>>>>>>>>> >>>>>>>>>>> >>>>>>>>>>> >>>>>>>>>>> >>>>>>>>>>> -- >>>>>>>>>>> System Analyst Programmer >>>>>>>>>>> PTI Lab >>>>>>>>>>> Indiana University >>>>>>>>>> >>>>>>>>> >>>>>>>> -----BEGIN PGP SIGNATURE----- >>>>>>>> Version: GnuPG/MacGPG2 v2.0.16 (Darwin) >>>>>>>> Comment: Using GnuPG with Mozilla - 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