Hi Ye, I have seen this error while using Maven 2.2.x. I may be wrong. Try to use maven 3.x.x to build Airavata.
Thanks Raminder On Feb 7, 2012, at 3:41 PM, Fan, Ye wrote: > Hi Lahiru, > > I cleaned the repo and run the "mvn clean install -Dmodule=xbaya -o > -Dmaven.test.skip=true" > > [INFO] Scanning for projects... > [ERROR] The build could not read 1 project -> [Help 1] > [ERROR] > [ERROR] The project org.apache.airavata:airavata:0.3-incubating-SNAPSHOT > (/Users/fanye/temp/airavata-trunk/pom.xml) has 1 error > [ERROR] Non-resolvable parent POM: The repository system is offline but > the artifact org.apache:apache:pom:10 is not available in the local > repository. and 'parent.relativePath' points at no local POM @ line 25, > column 13 -> [Help 2] > [ERROR] > [ERROR] To see the full stack trace of the errors, re-run Maven with the -e > switch. > [ERROR] Re-run Maven using the -X switch to enable full debug logging. > [ERROR] > [ERROR] For more information about the errors and possible solutions, please > read the following articles: > [ERROR] [Help 1] > http://cwiki.apache.org/confluence/display/MAVEN/ProjectBuildingException > [ERROR] [Help 2] > http://cwiki.apache.org/confluence/display/MAVEN/UnresolvableModelException > > Thanks > Ye > On Feb 6, 2012, at 5:35 PM, Lahiru Gunathilake wrote: > >> Hi Ye, >> >> IMO, Axiom error you are getting due to repository corruption. So please >> clean your repo and do a new build. I think now you can run airavata with >> tests. >> >> I just fixed the profile issue.. if you want you can invoke the profiles >> like this, >> >> mvn clean install -Dmodule=xbaya -o -Dmaven.test.skip=true >> >> Lahiru >> >> On Mon, Feb 6, 2012 at 4:34 PM, Fan, Ye <fa...@illinois.edu> wrote: >> >>> Hi, >>> >>> Today, I tried to only build Xbaya module on my laptop. According to the >>> build instruction, I ran "mvn clean install -Dmaven.test.skip=true >>> -Dmodule=xbaya-gui" >>> >>> Instead of just build XBaya, I get: >>> >>> >>> ==================================================================================================== >>> .... >>> [INFO] Compiling 10 source files to >>> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/target/classes >>> [INFO] >>> ------------------------------------------------------------------------ >>> [INFO] Reactor Summary: >>> [INFO] >>> [INFO] Airavata .......................................... SUCCESS [1.239s] >>> [INFO] Airavata Commons .................................. SUCCESS [0.022s] >>> [INFO] Airavata GFac Schema Utilities .................... SUCCESS [4.759s] >>> [INFO] Airavata Common Utilities ......................... SUCCESS [0.592s] >>> [INFO] Airavata Common Registry API ...................... SUCCESS [0.599s] >>> [INFO] Airavata Registry API ............................. SUCCESS [0.633s] >>> [INFO] Airavata Workflow Execution Context ............... SUCCESS [1.929s] >>> [INFO] Airavata-WS-Messenger ............................. SUCCESS [0.023s] >>> [INFO] Messenger Commons ................................. FAILURE [0.344s] >>> [INFO] Messenger Client .................................. SKIPPED >>> [INFO] Airavata Workflow Tracking ........................ SKIPPED >>> [INFO] GFac-Core ......................................... SKIPPED >>> [INFO] GFac-Axis2-Interface .............................. SKIPPED >>> [INFO] MessageBox ........................................ SKIPPED >>> [INFO] Message Broker .................................... SKIPPED >>> [INFO] distribution ...................................... SKIPPED >>> [INFO] Airavata XBaya .................................... SKIPPED >>> [INFO] Simple Math Service ............................... SKIPPED >>> [INFO] Complex Math Service .............................. SKIPPED >>> [INFO] Levenshtein Distance Service ...................... SKIPPED >>> [INFO] distribution ...................................... SKIPPED >>> [INFO] Test-Suite ........................................ SKIPPED >>> [INFO] >>> ------------------------------------------------------------------------ >>> [INFO] BUILD FAILURE >>> [INFO] >>> ------------------------------------------------------------------------ >>> [INFO] Total time: 10.535s >>> [INFO] Finished at: Mon Feb 06 15:31:27 CST 2012 >>> [INFO] Final Memory: 23M/81M >>> [INFO] >>> ------------------------------------------------------------------------ >>> [ERROR] Failed to execute goal >>> org.apache.maven.plugins:maven-compiler-plugin:2.0.2:compile >>> (default-compile) on project messenger-commons: Compilation failure: >>> Compilation failure: >>> [ERROR] >>> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/NameSpaceConstants.java:[24,26] >>> package org.apache.axiom.om does not exist >>> [ERROR] >>> [ERROR] >>> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/NameSpaceConstants.java:[25,26] >>> package org.apache.axiom.om does not exist >>> [ERROR] >>> [ERROR] >>> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/NameSpaceConstants.java:[26,26] >>> package org.apache.axiom.om does not exist >>> [ERROR] >>> [ERROR] >>> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/NameSpaceConstants.java:[30,24] >>> cannot find symbol >>> [ERROR] symbol : class OMFactory >>> [ERROR] location: class org.apache.airavata.wsmg.commons.NameSpaceConstants >>> [ERROR] >>> [ERROR] >>> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/NameSpaceConstants.java:[32,24] >>> cannot find symbol >>> [ERROR] symbol : class OMNamespace >>> [ERROR] location: class org.apache.airavata.wsmg.commons.NameSpaceConstants >>> [ERROR] >>> [ERROR] >>> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/NameSpaceConstants.java:[35,24] >>> cannot find symbol >>> [ERROR] symbol : class OMNamespace >>> [ERROR] location: class org.apache.airavata.wsmg.commons.NameSpaceConstants >>> [ERROR] >>> [ERROR] >>> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/NameSpaceConstants.java:[38,24] >>> cannot find symbol >>> [ERROR] symbol : class OMNamespace >>> [ERROR] location: class org.apache.airavata.wsmg.commons.NameSpaceConstants >>> [ERROR] >>> [ERROR] >>> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/NameSpaceConstants.java:[43,24] >>> cannot find symbol >>> [ERROR] symbol : class OMNamespace >>> [ERROR] location: class org.apache.airavata.wsmg.commons.NameSpaceConstants >>> [ERROR] >>> [ERROR] >>> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/NameSpaceConstants.java:[51,24] >>> cannot find symbol >>> [ERROR] symbol : class OMNamespace >>> [ERROR] location: class org.apache.airavata.wsmg.commons.NameSpaceConstants >>> [ERROR] >>> [ERROR] >>> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/NameSpaceConstants.java:[54,24] >>> cannot find symbol >>> [ERROR] symbol : class OMNamespace >>> [ERROR] location: class org.apache.airavata.wsmg.commons.NameSpaceConstants >>> [ERROR] >>> [ERROR] >>> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/NameSpaceConstants.java:[63,24] >>> cannot find symbol >>> [ERROR] symbol : class OMNamespace >>> [ERROR] location: class org.apache.airavata.wsmg.commons.NameSpaceConstants >>> [ERROR] >>> [ERROR] >>> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/NameSpaceConstants.java:[66,24] >>> cannot find symbol >>> [ERROR] symbol : class OMNamespace >>> [ERROR] location: class org.apache.airavata.wsmg.commons.NameSpaceConstants >>> [ERROR] >>> [ERROR] >>> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/NameSpaceConstants.java:[74,24] >>> cannot find symbol >>> [ERROR] symbol : class OMNamespace >>> [ERROR] location: class org.apache.airavata.wsmg.commons.NameSpaceConstants >>> [ERROR] >>> [ERROR] >>> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/CommonRoutines.java:[47,26] >>> package org.apache.axiom.om does not exist >>> [ERROR] >>> [ERROR] >>> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/CommonRoutines.java:[48,26] >>> package org.apache.axiom.om does not exist >>> [ERROR] >>> [ERROR] >>> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/CommonRoutines.java:[49,39] >>> package org.apache.axiom.om.impl.builder does not exist >>> [ERROR] >>> [ERROR] >>> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/CommonRoutines.java:[50,31] >>> package org.apache.axiom.om.util does not exist >>> [ERROR] >>> [ERROR] >>> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/CommonRoutines.java:[51,28] >>> package org.apache.axiom.soap does not exist >>> [ERROR] >>> [ERROR] >>> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/CommonRoutines.java:[52,28] >>> package org.apache.axiom.soap does not exist >>> [ERROR] >>> [ERROR] >>> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/CommonRoutines.java:[53,28] >>> package org.apache.axiom.soap does not exist >>> [ERROR] >>> [ERROR] >>> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/CommonRoutines.java:[54,41] >>> package org.apache.axiom.soap.impl.builder does not exist >>> [ERROR] >>> [ERROR] >>> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/CommonRoutines.java:[88,18] >>> cannot find symbol >>> [ERROR] symbol : class SOAPEnvelope >>> [ERROR] location: class org.apache.airavata.wsmg.commons.CommonRoutines >>> [ERROR] >>> [ERROR] >>> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/CommonRoutines.java:[105,18] >>> cannot find symbol >>> [ERROR] symbol : class OMElement >>> [ERROR] location: class org.apache.airavata.wsmg.commons.CommonRoutines >>> [ERROR] >>> [ERROR] >>> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/CommonRoutines.java:[114,36] >>> cannot find symbol >>> [ERROR] symbol : class OMElement >>> [ERROR] location: class org.apache.airavata.wsmg.commons.CommonRoutines >>> [ERROR] >>> [ERROR] >>> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/CommonRoutines.java:[196,12] >>> cannot find symbol >>> [ERROR] symbol : class OMElement >>> [ERROR] location: class org.apache.airavata.wsmg.commons.CommonRoutines >>> [ERROR] >>> [ERROR] >>> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/NameSpaceConstants.java:[30,44] >>> cannot find symbol >>> [ERROR] symbol : variable OMAbstractFactory >>> [ERROR] location: class org.apache.airavata.wsmg.commons.NameSpaceConstants >>> [ERROR] >>> [ERROR] >>> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/CommonRoutines.java:[92,8] >>> cannot find symbol >>> [ERROR] symbol : class StAXSOAPModelBuilder >>> [ERROR] location: class org.apache.airavata.wsmg.commons.CommonRoutines >>> [ERROR] >>> [ERROR] >>> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/CommonRoutines.java:[92,43] >>> cannot find symbol >>> [ERROR] symbol : class StAXSOAPModelBuilder >>> [ERROR] location: class org.apache.airavata.wsmg.commons.CommonRoutines >>> [ERROR] >>> [ERROR] >>> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/CommonRoutines.java:[93,8] >>> cannot find symbol >>> [ERROR] symbol : class SOAPEnvelope >>> [ERROR] location: class org.apache.airavata.wsmg.commons.CommonRoutines >>> [ERROR] >>> [ERROR] >>> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/CommonRoutines.java:[109,8] >>> cannot find symbol >>> [ERROR] symbol : class StAXOMBuilder >>> [ERROR] location: class org.apache.airavata.wsmg.commons.CommonRoutines >>> [ERROR] >>> [ERROR] >>> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/CommonRoutines.java:[109,36] >>> cannot find symbol >>> [ERROR] symbol : class StAXOMBuilder >>> [ERROR] location: class org.apache.airavata.wsmg.commons.CommonRoutines >>> [ERROR] >>> [ERROR] >>> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/CommonRoutines.java:[110,8] >>> cannot find symbol >>> [ERROR] symbol : class OMElement >>> [ERROR] location: class org.apache.airavata.wsmg.commons.CommonRoutines >>> [ERROR] >>> [ERROR] >>> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/CommonRoutines.java:[189,26] >>> cannot find symbol >>> [ERROR] symbol : variable UUIDGenerator >>> [ERROR] location: class org.apache.airavata.wsmg.commons.CommonRoutines >>> [ERROR] >>> [ERROR] >>> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/CommonRoutines.java:[198,8] >>> cannot find symbol >>> [ERROR] symbol : class SOAPFactory >>> [ERROR] location: class org.apache.airavata.wsmg.commons.CommonRoutines >>> [ERROR] >>> [ERROR] >>> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/CommonRoutines.java:[198,34] >>> cannot find symbol >>> [ERROR] symbol : variable OMAbstractFactory >>> [ERROR] location: class org.apache.airavata.wsmg.commons.CommonRoutines >>> [ERROR] >>> [ERROR] >>> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/CommonRoutines.java:[200,8] >>> cannot find symbol >>> [ERROR] symbol : class SOAPHeaderBlock >>> [ERROR] location: class org.apache.airavata.wsmg.commons.CommonRoutines >>> [ERROR] >>> [ERROR] >>> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/CommonRoutines.java:[201,22] >>> cannot find symbol >>> [ERROR] symbol : variable UUIDGenerator >>> [ERROR] location: class org.apache.airavata.wsmg.commons.CommonRoutines >>> [ERROR] >>> [ERROR] >>> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/CommonRoutines.java:[203,8] >>> cannot find symbol >>> [ERROR] symbol : class SOAPHeaderBlock >>> [ERROR] location: class org.apache.airavata.wsmg.commons.CommonRoutines >>> [ERROR] >>> [ERROR] >>> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/CommonRoutines.java:[206,8] >>> cannot find symbol >>> [ERROR] symbol : class SOAPHeaderBlock >>> [ERROR] location: class org.apache.airavata.wsmg.commons.CommonRoutines >>> [ERROR] >>> [ERROR] >>> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/CommonRoutines.java:[209,14] >>> cannot access org.apache.axiom.om.OMElement >>> [ERROR] class file for org.apache.axiom.om.OMElement not found >>> [ERROR] client.addHeader(action); >>> [ERROR] >>> [ERROR] >>> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/CommonRoutines.java:[210,14] >>> cannot access org.apache.axiom.soap.SOAPHeaderBlock >>> [ERROR] class file for org.apache.axiom.soap.SOAPHeaderBlock not found >>> [ERROR] client.addHeader(msgId); >>> [ERROR] >>> [ERROR] >>> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/CommonRoutines.java:[213,13] >>> cannot find symbol >>> [ERROR] symbol : class OMElement >>> [ERROR] location: class org.apache.airavata.wsmg.commons.CommonRoutines >>> [ERROR] >>> [ERROR] >>> /Users/fanye/temp/airavata-trunk/modules/ws-messenger/commons/src/main/java/org/apache/airavata/wsmg/commons/CommonRoutines.java:[215,57] >>> package org.apache.axiom.om.util does not exist >>> [ERROR] -> [Help 1] >>> [ERROR] >>> [ERROR] To see the full stack trace of the errors, re-run Maven with the >>> -e switch. >>> [ERROR] Re-run Maven using the -X switch to enable full debug logging. >>> [ERROR] >>> [ERROR] For more information about the errors and possible solutions, >>> please read the following articles: >>> [ERROR] [Help 1] >>> http://cwiki.apache.org/confluence/display/MAVEN/MojoFailureException >>> [ERROR] >>> [ERROR] After correcting the problems, you can resume the build with the >>> command >>> [ERROR] mvn <goals> -rf :messenger-commons >>> >>> >>> ==================================================================================================== >>> >>> Help please. >>> >>> Thanks >>> Ye >>> >>> On Feb 4, 2012, at 1:53 AM, Lahiru Gunathilake wrote: >>> >>>> I just built latest trunk, and started servers and didn't see any >>> exception >>>> like this... can you stop airavta-server script, and then delete >>> directory >>>> AIRAVATA_HOME(directory that you extracted >>>> tar.gz)/standalone-server/bin/wsmg and start airavata-server.sh again. >>>> >>>> Regards >>>> Lahiru >>>> >>>> On Fri, Feb 3, 2012 at 4:39 PM, Fan, Ye <fa...@illinois.edu> wrote: >>>> >>>>> Hi, >>>>> >>>>> Yes, I found "apache-airavata-0.2-incubating-SNAPSHOT-bin.tar.gz" in >>>>> "airavata-trunk/modules/distribution/target". >>>>> >>>>> And FYI, after started jackrabbit-server and airavata-server, I >>>>> periodically see this exception in command line. So far, I haven't >>>>> interacted with service yet. >>>>> >>>>> 3602507 [Thread-4] ERROR >>>>> org.apache.airavata.wsmg.commons.storage.ConnectionPool - Cannot close a >>>>> connection while a transaction is still active. >>>>> java.sql.SQLException: Cannot close a connection while a transaction is >>>>> still active. >>>>> at >>>>> org.apache.derby.impl.jdbc.SQLExceptionFactory40.getSQLException(Unknown >>>>> Source) >>>>> at org.apache.derby.impl.jdbc.Util.newEmbedSQLException(Unknown >>>>> Source) >>>>> at org.apache.derby.impl.jdbc.Util.newEmbedSQLException(Unknown >>>>> Source) >>>>> at org.apache.derby.impl.jdbc.Util.generateCsSQLException(Unknown >>>>> Source) >>>>> at >>>>> org.apache.derby.impl.jdbc.EmbedConnection.newSQLException(Unknown >>> Source) >>>>> at >>>>> >>> org.apache.derby.impl.jdbc.EmbedConnection.checkForTransactionInProgress(Unknown >>>>> Source) >>>>> at org.apache.derby.impl.jdbc.EmbedConnection.close(Unknown >>> Source) >>>>> at >>>>> >>> org.apache.airavata.wsmg.commons.storage.ConnectionPool.closeStaleConnections(ConnectionPool.java:244) >>>>> at >>>>> >>> org.apache.airavata.wsmg.commons.storage.ConnectionPool.access$200(ConnectionPool.java:40) >>>>> at >>>>> >>> org.apache.airavata.wsmg.commons.storage.ConnectionPool$CleanUpThread.run(ConnectionPool.java:335) >>>>> at java.lang.Thread.run(Thread.java:619) >>>>> Caused by: java.sql.SQLException: Cannot close a connection while a >>>>> transaction is still active. >>>>> at >>>>> org.apache.derby.impl.jdbc.SQLExceptionFactory.getSQLException(Unknown >>>>> Source) >>>>> at >>>>> >>> org.apache.derby.impl.jdbc.SQLExceptionFactory40.wrapArgsForTransportAcrossDRDA(Unknown >>>>> Source) >>>>> ... 11 more >>>>> 3630031 [Thread-14] INFO >>>>> org.apache.airavata.wsmg.commons.storage.JdbcStorage - Problem: 0 rows >>>>> affected by insert/update/delete statement. >>>>> >>>>> Thanks >>>>> Ye >>>>> >>>>> >>>>> On Feb 3, 2012, at 2:09 PM, Lahiru Gunathilake wrote: >>>>> >>>>>> Hi Ye, >>>>>> >>>>>> Please find the binary pack get created after a successful build in >>>>>> airavata/trunk/modules/distribution/target and follow the article with >>>>> the >>>>>> zip/tar.gz created. >>>>>> >>>>>> Lahiru >>>>>> >>>>>> On Fri, Feb 3, 2012 at 12:41 PM, Suresh Marru <sma...@apache.org> >>> wrote: >>>>>> >>>>>>> Hi Ye, >>>>>>> >>>>>>> Once your build is successful you will see a >>>>>>> apache-airavata-0.3-incubating-bin.zip (or tar.gz), once you untar it >>>>> you >>>>>>> will now see the binary environment the tutorials points to. We will >>>>> update >>>>>>> this in the document. The scripts within this binary should point to >>>>> right >>>>>>> paths. Let us know is you are still having problems with them. >>>>>>> >>>>>>> Suresh >>>>>>> >>>>>>> On Feb 3, 2012, at 12:27 PM, Fan, Ye wrote: >>>>>>> >>>>>>>> Marlon, >>>>>>>> >>>>>>>> Yes, I've already seen those documents. The thing is there is no >>>>>>> downloadable release version now. So I didn't see those scripts >>> earlier. >>>>>>> Anyway, I found them in >>>>>>> "airavata-trunk/modules/distribution/src/main/resources/bin" now and >>>>> tried >>>>>>> to run it: >>>>>>>> "./airavata-server.sh: line 21: cd: >>>>>>> >>>>> >>> /home/gridchem/airavata-trunk/modules/distribution/src/main/resources/standalone-server/bin: >>>>>>> No such file or directory >>>>>>>> ./airavata-server.sh: line 22: ./axis2server.sh: No such file or >>>>>>> directory" >>>>>>>> >>>>>>>> It looks like "$AIRAVATA_HOME" is not set correctly since I saw "cd >>>>>>> $AIRAVATA_HOME/standalone-server/bin" in airavata-server.sh. So, what >>>>>>> should it be in self-build situation? >>>>>>>> >>>>>>>> Suresh, >>>>>>>> >>>>>>>> I did clean install. >>>>>>>> >>>>>>>> Saminda, >>>>>>>> >>>>>>>> Will give it a try later. >>>>>>>> >>>>>>>> Thanks >>>>>>>> Ye >>>>>>>> >>>>>>>> >>>>>>>> On Feb 3, 2012, at 10:54 AM, Marlon Pierce wrote: >>>>>>>> >>>>>>>>> -----BEGIN PGP SIGNED MESSAGE----- >>>>>>>>> Hash: SHA1 >>>>>>>>> >>>>>>>>> Hi Ye, see >>>>>>> >>>>> >>> http://incubator.apache.org/airavata/documentation/system/airavata-in-5-minutes.htmland >>>>>>> >>>>> >>> http://incubator.apache.org/airavata/documentation/system/airavata-in-10-minutes.html >>>>>>>>> >>>>>>>>> >>>>>>>>> Marlon >>>>>>>>> >>>>>>>>> >>>>>>>>> On 2/3/12 11:51 AM, Fan, Ye wrote: >>>>>>>>>> The build without test passed. >>>>>>>>>> >>>>>>>>>> Can you please tell me what service I need to start to actually >>> run a >>>>>>> workflow in XBaya? >>>>>>>>>> >>>>>>>>>> I have these folder in "modules". >>>>>>>>>> >>>>>>>>>> "commons distribution gfac-axis2 gfac-core test-suite >>>>>>> workflow-interpreter ws-messenger xbaya-gui" >>>>>>>>>> >>>>>>>>>> Thanks >>>>>>>>>> Ye >>>>>>>>>> >>>>>>>>>> On Feb 3, 2012, at 10:27 AM, Fan, Ye wrote: >>>>>>>>>> >>>>>>>>>>> Hi, >>>>>>>>>>> >>>>>>>>>>> I've update the code and tried to rebuild the code again. Still no >>>>>>> good. Will try to build without test. >>>>>>>>>>> >>>>>>>>>>> Error: >>>>>>>>>>> >>>>>>>>>>> ....... >>>>>>>>>>> ....... >>>>>>>>>>> Caused by: >>> org.apache.jackrabbit.core.config.ConfigurationException: >>>>>>> Workspace directory already exists: default >>>>>>>>>>> at >>>>>>> >>>>> >>> org.apache.jackrabbit.core.config.RepositoryConfig.internalCreateWorkspaceConfig(RepositoryConfig.java:732) >>>>>>>>>>> at >>>>>>> >>>>> >>> org.apache.jackrabbit.core.config.RepositoryConfig.createWorkspaceConfig(RepositoryConfig.java:866) >>>>>>>>>>> at >>>>>>> >>>>> >>> org.apache.jackrabbit.core.config.RepositoryConfig.init(RepositoryConfig.java:594) >>>>>>>>>>> at >>>>>>> >>>>> >>> org.apache.jackrabbit.core.config.RepositoryConfig.create(RepositoryConfig.java:347) >>>>>>>>>>> at >>>>>>> >>>>> >>> org.apache.jackrabbit.core.config.RepositoryConfig.install(RepositoryConfig.java:157) >>>>>>>>>>> at >>>>>>> >>>>> >>> org.apache.jackrabbit.core.TransientRepository$3.getRepository(TransientRepository.java:250) >>>>>>>>>>> ... 36 more >>>>>>>>>>> java.lang.NullPointerException >>>>>>>>>>> Tests run: 2, Failures: 1, Errors: 0, Skipped: 0, Time elapsed: >>>>> 0.218 >>>>>>> sec <<< FAILURE! >>>>>>>>>>> ....... >>>>>>>>>>> ....... >>>>>>>>>>> ....... >>>>>>>>>>> Tests run: 11, Failures: 3, Errors: 0, Skipped: 0 >>>>>>>>>>> >>>>>>>>>>> [INFO] >>>>>>> >>> ------------------------------------------------------------------------ >>>>>>>>>>> [INFO] Reactor Summary: >>>>>>>>>>> [INFO] >>>>>>>>>>> [INFO] Airavata .......................................... SUCCESS >>>>>>> [7.628s] >>>>>>>>>>> [INFO] Airavata Commons .................................. SUCCESS >>>>>>> [0.116s] >>>>>>>>>>> [INFO] Airavata GFac Schema Utilities .................... SUCCESS >>>>>>> [31.148s] >>>>>>>>>>> [INFO] Airavata Common Utilities ......................... SUCCESS >>>>>>> [7.114s] >>>>>>>>>>> [INFO] Airavata Common Registry API ...................... SUCCESS >>>>>>> [6.834s] >>>>>>>>>>> [INFO] Airavata Registry API ............................. FAILURE >>>>>>> [21.393s] >>>>>>>>>>> [INFO] Airavata Workflow Execution Context ............... SKIPPED >>>>>>>>>>> [INFO] Airavata-WS-Messenger ............................. SKIPPED >>>>>>>>>>> [INFO] Messenger Commons ................................. SKIPPED >>>>>>>>>>> [INFO] Messenger Client .................................. SKIPPED >>>>>>>>>>> [INFO] Airavata Workflow Tracking ........................ SKIPPED >>>>>>>>>>> [INFO] GFac-Core ......................................... SKIPPED >>>>>>>>>>> [INFO] GFac-Axis2-Interface .............................. SKIPPED >>>>>>>>>>> [INFO] MessageBox ........................................ SKIPPED >>>>>>>>>>> [INFO] Message Broker .................................... SKIPPED >>>>>>>>>>> [INFO] distribution ...................................... SKIPPED >>>>>>>>>>> [INFO] Airavata XBaya .................................... SKIPPED >>>>>>>>>>> [INFO] Simple Math Service ............................... SKIPPED >>>>>>>>>>> [INFO] Complex Math Service .............................. SKIPPED >>>>>>>>>>> [INFO] Levenshtein Distance Service ...................... SKIPPED >>>>>>>>>>> [INFO] distribution ...................................... SKIPPED >>>>>>>>>>> [INFO] Test-Suite ........................................ SKIPPED >>>>>>>>>>> [INFO] >>>>>>> >>> ------------------------------------------------------------------------ >>>>>>>>>>> [INFO] BUILD FAILURE >>>>>>>>>>> [INFO] >>>>>>> >>> ------------------------------------------------------------------------ >>>>>>>>>>> [INFO] Total time: 1:16.010s >>>>>>>>>>> [INFO] Finished at: Fri Feb 03 16:10:08 EST 2012 >>>>>>>>>>> [INFO] Final Memory: 35M/85M >>>>>>>>>>> [INFO] >>>>>>> >>> ------------------------------------------------------------------------ >>>>>>>>>>> [ERROR] Failed to execute goal >>>>>>> org.apache.maven.plugins:maven-surefire-plugin:2.10:test >>> (default-test) >>>>> on >>>>>>> project registry-api: There are test failures. >>>>>>>>>>> [ERROR] >>>>>>>>>>> [ERROR] Please refer to >>>>>>> >>>>> >>> /home/gridchem/airavata-trunk/modules/commons/registry-api/target/surefire-reports >>>>>>> for the individual test results. >>>>>>>>>>> >>>>>>>>>>> Thanks >>>>>>>>>>> Ye >>>>>>>>>>> >>>>>>>>>>> >>>>>>>>>>> On Feb 2, 2012, at 10:22 PM, Lahiru Gunathilake wrote: >>>>>>>>>>> >>>>>>>>>>>> Hi Ye, >>>>>>>>>>>> >>>>>>>>>>>> Just fixed the build error, please take svn up and build again, >>> if >>>>>>> you >>>>>>>>>>>> have any further issues, please post in to the list.. >>>>>>>>>>>> >>>>>>>>>>>> Regards >>>>>>>>>>>> Lahiru >>>>>>>>>>>> >>>>>>>>>>>> On Thu, Feb 2, 2012 at 5:41 PM, Heshan Suriyaarachchi < >>>>>>>>>>>> heshan.suriyaarach...@gmail.com> wrote: >>>>>>>>>>>> >>>>>>>>>>>>> Hi Ye, >>>>>>>>>>>>> >>>>>>>>>>>>> You can skip the test and build using the following command. >>>>>>>>>>>>> mvn clean install -Dmaven.test.skip=true >>>>>>>>>>>>> >>>>>>>>>>>>> I came across this test failure now. We will have a look at it. >>> In >>>>>>> the >>>>>>>>>>>>> meantime, if you need to try out a stable version you can have a >>>>>>> look at >>>>>>>>>>>>> the branch[1]. >>>>>>>>>>>>> >>>>>>>>>>>>> [1] - >>>>>>>>>>>>> >>>>>>>>>>>>> >>>>>>> >>>>> >>> https://svn.apache.org/repos/asf/incubator/airavata/branches/0.2-incubating-SNAPSHOT >>>>>>>>>>>>> >>>>>>>>>>>>> On Thu, Feb 2, 2012 at 5:10 PM, Heshan Suriyaarachchi < >>>>>>>>>>>>> heshan.suriyaarach...@gmail.com> wrote: >>>>>>>>>>>>> >>>>>>>>>>>>>> Hi Ye, >>>>>>>>>>>>>> >>>>>>>>>>>>>> Thanks for your interest in Airavata. Can you have a look at >>> the >>>>>>> logs in >>>>>>>>>>>>>> directory /home/gridchem/airavata-trunk/ >>>>>>>>>>>>>> modules/ws-messenger/messagebox/target/surefire-reports and see >>>>>>> what >>>>>>>>>>>>> tests >>>>>>>>>>>>>> are failing. >>>>>>>>>>>>>> >>>>>>>>>>>>>> >>>>>>>>>>>>>> On Thu, Feb 2, 2012 at 4:51 PM, Fan, Ye <fa...@illinois.edu> >>>>>>> wrote: >>>>>>>>>>>>>> >>>>>>>>>>>>>>> Hi, >>>>>>>>>>>>>>> >>>>>>>>>>>>>>> I'm Ye Fan from NCSA at University of Illinois at >>>>>>> Urbana-Champaign. I'm >>>>>>>>>>>>>>> trying to get the Aivarata workflow suite running on >>>>>>>>>>>>>>> gw26.qurray.iu.teragrid.org. >>>>>>>>>>>>>>> >>>>>>>>>>>>>>> I've followed the instruction: >>>>>>>>>>>>>>> Check out the code from svn: "svn co >>>>>>>>>>>>>>> https://svn.apache.org/repos/asf/incubator/airavata/trunk/";. >>>>>>>>>>>>>>> Make sure the java version is: 1.6.0_19. >>>>>>>>>>>>>>> Make sure the maven version is: "Apache Maven 3.0.4 (r1232337; >>>>>>>>>>>>> 2012-01-17 >>>>>>>>>>>>>>> 03:44:56-0500)". >>>>>>>>>>>>>>> >>>>>>>>>>>>>>> However, no matter I build with "mvn clean install" or "mvn >>>>> clean >>>>>>>>>>>>> install >>>>>>>>>>>>>>> -DskipTests", I get errors: >>>>>>>>>>>>>>> >>>>>>>>>>>>>>> [INFO] >>>>>>>>>>>>>>> >>>>>>> >>> ------------------------------------------------------------------------ >>>>>>>>>>>>>>> [INFO] Reactor Summary: >>>>>>>>>>>>>>> [INFO] >>>>>>>>>>>>>>> [INFO] Airavata .......................................... >>>>> SUCCESS >>>>>>>>>>>>>>> [7.523s] >>>>>>>>>>>>>>> [INFO] Airavata Commons .................................. >>>>> SUCCESS >>>>>>>>>>>>>>> [0.102s] >>>>>>>>>>>>>>> [INFO] Airavata GFac Schema Utilities .................... >>>>> SUCCESS >>>>>>>>>>>>>>> [30.255s] >>>>>>>>>>>>>>> [INFO] Airavata Common Utilities ......................... >>>>> SUCCESS >>>>>>>>>>>>>>> [6.998s] >>>>>>>>>>>>>>> [INFO] Airavata Common Registry API ...................... >>>>> SUCCESS >>>>>>>>>>>>>>> [6.801s] >>>>>>>>>>>>>>> [INFO] Airavata Registry API ............................. >>>>> SUCCESS >>>>>>>>>>>>>>> [4:22.340s] >>>>>>>>>>>>>>> [INFO] Airavata Workflow Execution Context ............... >>>>> SUCCESS >>>>>>>>>>>>>>> [14.873s] >>>>>>>>>>>>>>> [INFO] Airavata-WS-Messenger ............................. >>>>> SUCCESS >>>>>>>>>>>>>>> [0.102s] >>>>>>>>>>>>>>> [INFO] Messenger Commons ................................. >>>>> SUCCESS >>>>>>>>>>>>>>> [10.284s] >>>>>>>>>>>>>>> [INFO] Messenger Client .................................. >>>>> SUCCESS >>>>>>>>>>>>>>> [10.984s] >>>>>>>>>>>>>>> [INFO] Airavata Workflow Tracking ........................ >>>>> SUCCESS >>>>>>>>>>>>>>> [23.850s] >>>>>>>>>>>>>>> [INFO] GFac-Core ......................................... >>>>> SUCCESS >>>>>>>>>>>>>>> [19.056s] >>>>>>>>>>>>>>> [INFO] GFac-Axis2-Interface .............................. >>>>> SUCCESS >>>>>>>>>>>>>>> [24.018s] >>>>>>>>>>>>>>> [INFO] MessageBox ........................................ >>>>> FAILURE >>>>>>>>>>>>>>> [1:14.598s] >>>>>>>>>>>>>>> [INFO] Message Broker .................................... >>>>> SKIPPED >>>>>>>>>>>>>>> [INFO] distribution ...................................... >>>>> SKIPPED >>>>>>>>>>>>>>> [INFO] Airavata XBaya .................................... >>>>> SKIPPED >>>>>>>>>>>>>>> [INFO] Simple Math Service ............................... >>>>> SKIPPED >>>>>>>>>>>>>>> [INFO] Complex Math Service .............................. >>>>> SKIPPED >>>>>>>>>>>>>>> [INFO] Levenshtein Distance Service ...................... >>>>> SKIPPED >>>>>>>>>>>>>>> [INFO] distribution ...................................... >>>>> SKIPPED >>>>>>>>>>>>>>> [INFO] Test-Suite ........................................ >>>>> SKIPPED >>>>>>>>>>>>>>> [INFO] >>>>>>>>>>>>>>> >>>>>>> >>> ------------------------------------------------------------------------ >>>>>>>>>>>>>>> [INFO] BUILD FAILURE >>>>>>>>>>>>>>> [INFO] >>>>>>>>>>>>>>> >>>>>>> >>> ------------------------------------------------------------------------ >>>>>>>>>>>>>>> [INFO] Total time: 8:13.569s >>>>>>>>>>>>>>> [INFO] Finished at: Thu Feb 02 21:43:55 EST 2012 >>>>>>>>>>>>>>> [INFO] Final Memory: 44M/151M >>>>>>>>>>>>>>> [INFO] >>>>>>>>>>>>>>> >>>>>>> >>> ------------------------------------------------------------------------ >>>>>>>>>>>>>>> [ERROR] Failed to execute goal >>>>>>>>>>>>>>> org.apache.maven.plugins:maven-surefire-plugin:2.10:test >>>>>>> (default-test) >>>>>>>>>>>>> on >>>>>>>>>>>>>>> project messagebox: There are test failures. >>>>>>>>>>>>>>> [ERROR] >>>>>>>>>>>>>>> [ERROR] Please refer to >>>>>>>>>>>>>>> >>>>>>>>>>>>> >>>>>>> >>>>> >>> /home/gridchem/airavata-trunk/modules/ws-messenger/messagebox/target/surefire-reports >>>>>>>>>>>>>>> for the individual test results. >>>>>>>>>>>>>>> >>>>>>>>>>>>>>> Please help. >>>>>>>>>>>>>>> >>>>>>>>>>>>>>> Thanks >>>>>>>>>>>>>>> Ye >>>>>>>>>>>>>>> >>>>>>>>>>>>>>> >>>>>>>>>>>>>>> >>>>>>>>>>>>>>> >>>>>>>>>>>>>> >>>>>>>>>>>>>> >>>>>>>>>>>>>> -- >>>>>>>>>>>>>> Regards, >>>>>>>>>>>>>> Heshan Suriyaarachchi >>>>>>>>>>>>>> >>>>>>>>>>>>>> http://heshans.blogspot.com/ >>>>>>>>>>>>>> >>>>>>>>>>>>> >>>>>>>>>>>>> >>>>>>>>>>>>> >>>>>>>>>>>>> -- >>>>>>>>>>>>> Regards, >>>>>>>>>>>>> Heshan Suriyaarachchi >>>>>>>>>>>>> >>>>>>>>>>>>> http://heshans.blogspot.com/ >>>>>>>>>>>>> >>>>>>>>>>>> >>>>>>>>>>>> >>>>>>>>>>>> >>>>>>>>>>>> -- >>>>>>>>>>>> System Analyst Programmer >>>>>>>>>>>> PTI Lab >>>>>>>>>>>> Indiana University >>>>>>>>>>> >>>>>>>>>> >>>>>>>>> -----BEGIN PGP SIGNATURE----- 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