Hi,
don't use the rforge.net repository. Use the installation scripts I provide:
source("http://www.braju.com/R/hbLite.R";);
hbInstall("aroma.affymetrix");
/Henrik
PS. The matrixStats package is now actually on CRAN, but I always
prefer that you use the above because the location might change (like
it just did).
2009/6/22 mortiz <[email protected]>:
>
> Hi Henrik,
>
> ive tried to install aroma.affymetrix and it says aroma.core needs
> matrixStats package. Ive tried to install it but the new version
> (matrixStats 0.1.4 for windows) gives me an error... ive installed the
> 0.1.3 version, it works but then aroma.affymetrix says it needs the
> latest version of matrixStats.
>
>> sessionInfo()
> R version 2.9.0 (2009-04-17)
> i386-pc-mingw32
>
> locale:
> LC_COLLATE=English_United States.1252;LC_CTYPE=English_United States.
> 1252;LC_MONETARY=English_United States.
> 1252;LC_NUMERIC=C;LC_TIME=English_United States.1252
>
> attached base packages:
> [1] stats graphics grDevices utils datasets methods
> base
>
> other attached packages:
> [1] R.rsp_0.3.5 R.filesets_0.5.1 digest_0.3.1
> R.cache_0.1.7
> [5] R.utils_1.1.6 R.oo_1.4.6 matrixStats_0.1.3
> R.methodsS3_1.0.3
>
> loaded via a namespace (and not attached):
> [1] tools_2.9.0
>
> ges('matrixStats',,'http://www.rforge.net/')
> trying URL 'http://www.rforge.net/bin/windows/contrib/2.9/
> matrixStats_0.1.4.zip'
> Content type 'application/zip' length 2510 bytes
> opened URL
> downloaded 2510 bytes
>
>
> The downloaded packages are in
> C:\Documents and Settings\mortiz\Local Settings\Temp\Rtmp5feJQq
> \downloaded_packages
> updating HTML package descriptions
>> library(matrixStats)
> Loading required package: R.methodsS3
> R.methodsS3 v1.0.3 (2008-07-02) successfully loaded. See ?R.methodsS3
> for help.
> Error in library.dynam(lib, package, package.lib) :
> shared library 'matrixStats' not found
> In addition: Warning message:
> In loadNamespace(package, c(which.lib.loc, lib.loc), keep.source =
> keep.source) :
> package 'matrixStats' contains no R code
> Error: package/namespace load failed for 'matrixStats'
>
> rary(aroma.affymetrix)
> Loading required package: R.utils
> Loading required package: R.oo
> R.oo v1.4.6 (2008-08-11) successfully loaded. See ?R.oo for help.
> R.utils v1.1.6 (2009-05-19) successfully loaded. See ?R.utils for
> help.
> Loading required package: aroma.core
> Loading required package: R.cache
> R.cache v0.1.7 (2008-02-27) successfully loaded. See ?R.cache for
> help.
> Loading required package: R.filesets
> Loading required package: digest
> R.filesets v0.5.1 (2009-05-19) successfully loaded. See ?R.filesets
> for help.
> Loading required package: R.rsp
> R.rsp v0.3.5 (2009-02-28) successfully loaded. See ?R.rsp for help.
> Type browseRsp() to open the RSP main menu in your browser.
> Loading required package: matrixStats
> Error in library.dynam(lib, package, package.lib) :
> shared library 'matrixStats' not found
> In addition: Warning messages:
> 1: package 'aroma.affymetrix' was built under R version 2.9.1
> 2: In loadNamespace(package, c(which.lib.loc, lib.loc), keep.source =
> keep.source) :
> package 'matrixStats' contains no R code
> Error: package 'matrixStats' could not be loaded
>
>
> do you know how could i fix this???
>
> thanks!
>
> nice day!
>
> maría
> >
>
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