My name is Emilie , I'am a french student and I use the vignette
"Total copy number analysis using CRMA v1(10k,100k,500k).
When I arrive on the function extractRawCopyNumbers I'have an error
and I can't solve it.
The error is :
rawCNstest=extractRawCopyNumbers(gladtest,array=1,chromosome=1)
Erreur dans list(`extractRawCopyNumbers(gladtest, array = 1,
chromosome = 1)` = <environment>, :
[2011-03-03 11:34:08] Exception: Argument 'range' is not ordered:
c(Inf,-Inf)
at throw(Exception(...))
at throw.default(sprintf("Argument 'range' is not ordered: c(%s,
%s)", range[1]
at throw(sprintf("Argument 'range' is not ordered: c(%s,%s)",
range[1], range[
at getIndices.Arguments(static, ..., length = length)
at getIndices(static, ..., length = length)
at method(static, ...)
at Arguments$getIndex(chromosome, range = range(allChromosomes))
at extractRawCopyNumbers.CopyNumberChromosomalModel(gladtest, array
= 1, chrom
at extractRawCopyNumbers(gladtest, array = 1, chromosome = 1)
De plus : Messages d'avis :
1: In min(x) : aucun argument trouvé pour min ; Inf est renvoyé
2: In max(x) : aucun argument pour max ; -Inf est renvoyé
Thanks you in advance.
--
When reporting problems on aroma.affymetrix, make sure 1) to run the latest
version of the package, 2) to report the output of sessionInfo() and
traceback(), and 3) to post a complete code example.
You received this message because you are subscribed to the Google Groups
"aroma.affymetrix" group with website http://www.aroma-project.org/.
To post to this group, send email to aroma-affymetrix@googlegroups.com
To unsubscribe and other options, go to http://www.aroma-project.org/forum/
