Hello, In the paper: FIRMA: a method for detection of alternative splicing from exon array data, Purdom et. al.
the figures, such as the first figure, in "Supplementary Data 2 - pdf file", it looks like a call to gdPlot was made with a list containing title, FIRMA scores heatmap, ExonArray with residuals, and so on. Would someone have a snippet of code they would share that shows the way to create the FIRMA scores heatmap in such a way that it can be passed to gdPlot? The nice example at http://aroma-project.org/node/61 doesn't show how to do such a heatmap. I've looked into all the documentation and email responses I can find, but to no avail. I'd be very grateful. Thanks much, Dick ******************************************************************************* Richard P. Beyer, Ph.D. University of Washington Tel.:(206) 616 7378 Env. & Occ. Health Sci. , Box 354695 Fax: (206) 685 4696 4225 Roosevelt Way NE, # 100 Seattle, WA 98105-6099 http://depts.washington.edu/ceeh/members_fc_bioinfo.html http://staff.washington.edu/~dbeyer ******************************************************************************* -- When reporting problems on aroma.affymetrix, make sure 1) to run the latest version of the package, 2) to report the output of sessionInfo() and traceback(), and 3) to post a complete code example. You received this message because you are subscribed to the Google Groups "aroma.affymetrix" group with website http://www.aroma-project.org/. To post to this group, send email to aroma-affymetrix@googlegroups.com To unsubscribe and other options, go to http://www.aroma-project.org/forum/
