Hi, which chip type and CDF are you thinking of? Even better, please show the code how you got those numbers and we take it from there.
/Henrik On Tue, May 17, 2011 at 1:53 PM, Irene Pylypenko <ipylype...@gmail.com> wrote: > Hello, > How do I find the genomic location of each probe (cell)? Specifically, > a chromosome # and start site. Is this information stored in a > AffymetrixCelSet object? > I know the cdf object contains this information, via the > AromaCellPositionFile file, but this gives me 4,359,744 probes, where > as AffymetrixCelSet gives me 4,691,556. So I was wondering how I could > map these two files. > I know about the UGP files, but I believe it gives the unit locations, > whereas I'm interested in probe location. > Thanks, > Irene > > -- > When reporting problems on aroma.affymetrix, make sure 1) to run the latest > version of the package, 2) to report the output of sessionInfo() and > traceback(), and 3) to post a complete code example. > > > You received this message because you are subscribed to the Google Groups > "aroma.affymetrix" group with website http://www.aroma-project.org/. > To post to this group, send email to aroma-affymetrix@googlegroups.com > To unsubscribe and other options, go to http://www.aroma-project.org/forum/ > -- When reporting problems on aroma.affymetrix, make sure 1) to run the latest version of the package, 2) to report the output of sessionInfo() and traceback(), and 3) to post a complete code example. You received this message because you are subscribed to the Google Groups "aroma.affymetrix" group with website http://www.aroma-project.org/. To post to this group, send email to aroma-affymetrix@googlegroups.com To unsubscribe and other options, go to http://www.aroma-project.org/forum/
