Hi, I've downloaded the HuEx10stv2_Hs_REFSEQ cdf file and coverted into a binary cdf.
I'm new to analyzing microarray data in R, so can someone please tell me how to get RefSeq annotation for the probe set IDs? I was hoping that the custom cdf would have the best annotation since currently linking the array ids to biomart is very sparse. So after loading the cdf, what would be the next step to simply get the annotation? I really can't find any documentation online on how to do this. ... refseq_bin_cdf <- AffymetrixCdfFile$byChipType("HuEx10stv2_Hs_REFSEQ.bin") ? Thanks, Stacy -- -- When reporting problems on aroma.affymetrix, make sure 1) to run the latest version of the package, 2) to report the output of sessionInfo() and traceback(), and 3) to post a complete code example. You received this message because you are subscribed to the Google Groups "aroma.affymetrix" group with website http://www.aroma-project.org/. To post to this group, send email to firstname.lastname@example.org To unsubscribe and other options, go to http://www.aroma-project.org/forum/ --- You received this message because you are subscribed to the Google Groups "aroma.affymetrix" group. To unsubscribe from this group and stop receiving emails from it, send an email to aroma-affymetrix+unsubscr...@googlegroups.com. For more options, visit https://groups.google.com/groups/opt_out.